RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 HSPB7Q9UBY9 170 aa10.33□□□□□ -0.76
HIF3A-201ENST00000244302 IGHV1-69DA0A0B4J2H0 117 aa10.33□□□□□ -0.76
HIF3A-201ENST00000244302 LOC102723971A0A1B0GUV8 181 aa10.33□□□□□ -0.76
HIF3A-201ENST00000244302 UPK2O00526 184 aa10.33□□□□□ -0.76
HIF3A-201ENST00000244302 TXNL1O43396 289 aa10.33□□□□□ -0.76
HIF3A-201ENST00000244302 HRASP01112 189 aa10.33□□□□□ -0.76
HIF3A-201ENST00000244302 IGHV1-69P01742 117 aa10.33□□□□□ -0.76
HIF3A-201ENST00000244302 ARL16Q0P5N6 197 aa10.33□□□□□ -0.76
HIF3A-201ENST00000244302 TMEM267Q0VDI3 215 aaPredicted RBP10.33□□□□□ -0.76
HIF3A-201ENST00000244302 KIAA0141Q14154 515 aaPredicted RBP10.33□□□□□ -0.76
HIF3A-201ENST00000244302 HES1Q14469 280 aa10.33□□□□□ -0.76
HIF3A-201ENST00000244302 HAGHQ16775 308 aa10.33□□□□□ -0.76
HIF3A-201ENST00000244302 PRSS57Q6UWY2 283 aa10.33□□□□□ -0.76
HIF3A-201ENST00000244302 C19orf35Q6ZS72 473 aa10.33□□□□□ -0.76
HIF3A-201ENST00000244302 OSR1Q8TAX0 266 aaPredicted RBP10.33□□□□□ -0.76
HIF3A-201ENST00000244302 EAF1Q96JC9 268 aaPredicted RBP10.33□□□□□ -0.76
HIF3A-201ENST00000244302 PSMG3Q9BT73 122 aaPredicted RBP10.33□□□□□ -0.76
HIF3A-201ENST00000244302 PARD6GQ9BYG4 376 aaPredicted RBP10.33□□□□□ -0.76
HIF3A-201ENST00000244302 ZNF430Q9H8G1 570 aaPredicted RBP10.33□□□□□ -0.76
HIF3A-201ENST00000244302 NF1P21359 2839 aa10.32□□□□□ -0.76
HIF3A-201ENST00000244302 SH2D7A6NKC9 451 aaPredicted RBP10.32□□□□□ -0.76
HIF3A-201ENST00000244302 CGB1A6NKQ9 187 aa10.32□□□□□ -0.76
HIF3A-201ENST00000244302 LINC00587B1AMM8 73 aa10.32□□□□□ -0.76
HIF3A-201ENST00000244302 MC5RP33032 325 aa10.32□□□□□ -0.76
HIF3A-201ENST00000244302 RPS10P46783 165 aaKnown RBP10.32□□□□□ -0.76
HIF3A-201ENST00000244302 DLK1P80370 383 aa10.32□□□□□ -0.76
HIF3A-201ENST00000244302 PSG5Q15238 335 aa10.32□□□□□ -0.76
HIF3A-201ENST00000244302 POU2AF1Q16633 256 aa10.32□□□□□ -0.76
HIF3A-201ENST00000244302 SPANXN5Q5MJ07 72 aa10.32□□□□□ -0.76
HIF3A-201ENST00000244302 IL17RELQ6ZVW7 336 aa10.32□□□□□ -0.76
HIF3A-201ENST00000244302 CYB561D1Q8N8Q1 229 aa10.32□□□□□ -0.76
HIF3A-201ENST00000244302 TEX50A0A1B0GTY4 177 aa10.31□□□□□ -0.76
HIF3A-201ENST00000244302 C15orf61A6NNL5 157 aa10.31□□□□□ -0.76
HIF3A-201ENST00000244302 KBTBD11O94819 623 aa10.31□□□□□ -0.76
HIF3A-201ENST00000244302 CDX1P47902 265 aaPredicted RBP10.31□□□□□ -0.76
HIF3A-201ENST00000244302 SSBP2P81877 361 aaPredicted RBP10.31□□□□□ -0.76
HIF3A-201ENST00000244302 ELOBQ15370 118 aa10.31□□□□□ -0.76
HIF3A-201ENST00000244302 HAPLN4Q86UW8 402 aa10.31□□□□□ -0.76
HIF3A-201ENST00000244302 TMEM242Q9NWH2 141 aa10.31□□□□□ -0.76
HIF3A-201ENST00000244302 OR51B2Q9Y5P1 312 aa10.31□□□□□ -0.76
HIF3A-201ENST00000244302 TRAV20A0A0B4J274 112 aa10.31□□□□□ -0.76
HIF3A-201ENST00000244302 CEBPZOSA8MTT3 80 aa10.31□□□□□ -0.76
HIF3A-201ENST00000244302 METTL15P1P0C7V9 234 aa10.31□□□□□ -0.76
HIF3A-201ENST00000244302 CEACAM3P40198 252 aa10.31□□□□□ -0.76
HIF3A-201ENST00000244302 RUNX1Q01196 453 aa10.31□□□□□ -0.76
HIF3A-201ENST00000244302 SLC25A24Q6NUK1 477 aa10.31□□□□□ -0.76
HIF3A-201ENST00000244302 SCGB1C1Q8TD33 95 aa10.31□□□□□ -0.76
HIF3A-201ENST00000244302 TMEM170AQ8WVE7 144 aa10.31□□□□□ -0.76
HIF3A-201ENST00000244302 MBD3L1Q8WWY6 194 aa10.31□□□□□ -0.76
HIF3A-201ENST00000244302 OR4C12Q96R67 309 aa10.31□□□□□ -0.76
HIF3A-201ENST00000244302 P2RX4Q99571 388 aa10.31□□□□□ -0.76
HIF3A-201ENST00000244302 SMR3AQ99954 134 aa10.31□□□□□ -0.76
HIF3A-201ENST00000244302 TMEM14BQ9NUH8 114 aa10.31□□□□□ -0.76
HIF3A-201ENST00000244302 PSENENQ9NZ42 101 aa10.31□□□□□ -0.76
HIF3A-201ENST00000244302 TCF19Q9Y242 345 aa10.31□□□□□ -0.76
HIF3A-201ENST00000244302 CRYGBP07316 175 aa10.3□□□□□ -0.76
HIF3A-201ENST00000244302 HBG1P69891 147 aa10.3□□□□□ -0.76
HIF3A-201ENST00000244302 HBG2P69892 147 aa10.3□□□□□ -0.76
HIF3A-201ENST00000244302 SERF2P84101 59 aa10.3□□□□□ -0.76
HIF3A-201ENST00000244302 PMS2P11Q13670 270 aa10.3□□□□□ -0.76
HIF3A-201ENST00000244302 MINOS1Q5TGZ0 78 aa10.3□□□□□ -0.76
HIF3A-201ENST00000244302 TMEM219Q86XT9 240 aa10.3□□□□□ -0.76
HIF3A-201ENST00000244302 PIFOQ8TCI5 191 aa10.3□□□□□ -0.76
HIF3A-201ENST00000244302 DTD1Q8TEA8 209 aa10.3□□□□□ -0.76
HIF3A-201ENST00000244302 BET1LQ9NYM9 111 aa10.3□□□□□ -0.76
HIF3A-201ENST00000244302 ZMAT5Q9UDW3 170 aaKnown RBP10.3□□□□□ -0.76
HIF3A-201ENST00000244302 MINOS1-NBL1R4GNA1 71 aa10.3□□□□□ -0.76
HIF3A-201ENST00000244302 ELOA3CA0A087WX78 387 aaPredicted RBP10.3□□□□□ -0.76
HIF3A-201ENST00000244302 FBP1P09467 338 aa10.3□□□□□ -0.76
HIF3A-201ENST00000244302 CD1BP29016 333 aa10.3□□□□□ -0.76
HIF3A-201ENST00000244302 GNB1P62873 340 aa10.3□□□□□ -0.76
HIF3A-201ENST00000244302 MMDQ15546 238 aa10.3□□□□□ -0.76
HIF3A-201ENST00000244302 THNSL2Q86YJ6 484 aa10.3□□□□□ -0.76
HIF3A-201ENST00000244302 Q8WTZ3 238 aa10.3□□□□□ -0.76
HIF3A-201ENST00000244302 SIGLEC9Q9Y336 463 aa10.3□□□□□ -0.76
HIF3A-201ENST00000244302 DMRT1Q9Y5R6 373 aa10.3□□□□□ -0.76
HIF3A-201ENST00000244302 HIVEP1P15822 2718 aa10.29□□□□□ -0.76
HIF3A-201ENST00000244302 SEC14L6B5MCN3 397 aa10.29□□□□□ -0.76
HIF3A-201ENST00000244302 FAM90A26D6RGX4 464 aa10.29□□□□□ -0.76
HIF3A-201ENST00000244302 RRHO14718 337 aa10.29□□□□□ -0.76
HIF3A-201ENST00000244302 NDUFS6O75380 124 aaKnown RBP10.29□□□□□ -0.76
HIF3A-201ENST00000244302 IFNA1P01562 189 aa10.29□□□□□ -0.76
HIF3A-201ENST00000244302 REG1AP05451 166 aa10.29□□□□□ -0.76
HIF3A-201ENST00000244302 BCL2P10415 239 aa10.29□□□□□ -0.76
HIF3A-201ENST00000244302 S100A2P29034 98 aa10.29□□□□□ -0.76
HIF3A-201ENST00000244302 VDAC2P45880 294 aaPredicted RBP10.29□□□□□ -0.76
HIF3A-201ENST00000244302 RND2P52198 227 aa10.29□□□□□ -0.76
HIF3A-201ENST00000244302 ZNF674Q2M3X9 581 aa10.29□□□□□ -0.76
HIF3A-201ENST00000244302 DNLZQ5SXM8 178 aa10.29□□□□□ -0.76
HIF3A-201ENST00000244302 TMEM167AQ8TBQ9 72 aa10.29□□□□□ -0.76
HIF3A-201ENST00000244302 PINX1Q96BK5 328 aaKnown RBP10.29□□□□□ -0.76
HIF3A-201ENST00000244302 FOXC2Q99958 501 aa10.29□□□□□ -0.76
HIF3A-201ENST00000244302 FAM103A1Q9BTL3 118 aaKnown RBP10.29□□□□□ -0.76
HIF3A-201ENST00000244302 FOXA2Q9Y261 457 aaPredicted RBP10.29□□□□□ -0.76
HIF3A-201ENST00000244302 TBL2Q9Y4P3 447 aaKnown RBP10.29□□□□□ -0.76
HIF3A-201ENST00000244302 FAM90A9PA6NNJ1 464 aa10.28□□□□□ -0.76
HIF3A-201ENST00000244302 NCBP2LA6PVI3 153 aaKnown RBP10.28□□□□□ -0.76
HIF3A-201ENST00000244302 MOSP00540 346 aa10.28□□□□□ -0.76
HIF3A-201ENST00000244302 CD81P60033 236 aa10.28□□□□□ -0.76
HIF3A-201ENST00000244302 HSPE1P61604 102 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms