RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 PPP5D1E7EU14 171 aa6.37□□□□□ -1.39
CXCR4-201ENST00000241393 HMGB3O15347 200 aaKnown RBP6.37□□□□□ -1.39
CXCR4-201ENST00000241393 SLC31A2O15432 143 aa6.37□□□□□ -1.39
CXCR4-201ENST00000241393 MT-CO2P00403 227 aa6.37□□□□□ -1.39
CXCR4-201ENST00000241393 IGHV2-70P01814 119 aa6.37□□□□□ -1.39
CXCR4-201ENST00000241393 SAA2P0DJI9 122 aaPredicted RBP6.37□□□□□ -1.39
CXCR4-201ENST00000241393 IRF2P14316 349 aa6.37□□□□□ -1.39
CXCR4-201ENST00000241393 RPL29P47914 159 aaKnown RBP6.37□□□□□ -1.39
CXCR4-201ENST00000241393 MEF2CQ06413 473 aaPredicted RBP6.37□□□□□ -1.39
CXCR4-201ENST00000241393 OR4A47Q6IF82 309 aa6.37□□□□□ -1.39
CXCR4-201ENST00000241393 KCNIP4Q6PIL6 250 aa6.37□□□□□ -1.39
CXCR4-201ENST00000241393 SPNS3Q6ZMD2 512 aa6.37□□□□□ -1.39
CXCR4-201ENST00000241393 SLC25A48Q6ZT89 311 aaKnown RBP6.37□□□□□ -1.39
CXCR4-201ENST00000241393 SSX9Q7RTT3 188 aa6.37□□□□□ -1.39
CXCR4-201ENST00000241393 RBMXL3Q8N7X1 1067 aaKnown RBP6.37□□□□□ -1.39
CXCR4-201ENST00000241393 SLC24A4Q8NFF2 622 aa6.37□□□□□ -1.39
CXCR4-201ENST00000241393 ACY3Q96HD9 319 aa6.37□□□□□ -1.39
CXCR4-201ENST00000241393 MGST2Q99735 147 aa6.37□□□□□ -1.39
CXCR4-201ENST00000241393 FKBP11Q9NYL4 201 aa6.37□□□□□ -1.39
CXCR4-201ENST00000241393 ELOVL5Q9NYP7 299 aa6.37□□□□□ -1.39
CXCR4-201ENST00000241393 RPUSD1Q9UJJ7 312 aaKnown RBP6.37□□□□□ -1.39
CXCR4-201ENST00000241393 WDFY4Q6ZS81 3184 aa6.37□□□□□ -1.39
CXCR4-201ENST00000241393 DOCK11Q5JSL3 2073 aa6.37□□□□□ -1.39
CXCR4-201ENST00000241393 HCFC1P51610 2035 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 DIDO1Q9BTC0 2240 aaKnown RBP6.36□□□□□ -1.39
CXCR4-201ENST00000241393 NKX6-3A6NJ46 265 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 NPPCP23582 126 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 RHOBP62745 196 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 RTL8BQ17RB0 113 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 SPRNQ5BIV9 151 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 PYY3Q5JQD4 70 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 TCF23Q7RTU1 214 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 LINC01551Q86U37 167 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 TMEM183AQ8IXX5 376 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 ZNF383Q8NA42 475 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 OR2T10Q8NGZ9 312 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 OR4X1Q8NH49 305 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 GATAD1Q8WUU5 269 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 LINC00312Q9Y6C7 94 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 LY96Q9Y6Y9 160 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 DSCAML1Q8TD84 2053 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 TRAV9-1A0A075B6T8 112 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 TRAV3A0A0B4J244 114 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 TRAV38-1A0A0B4J264 116 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 LINC00587B1AMM8 73 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 USP17L23D6RBM5 183 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 INS-IGF2F8WCM5 200 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 UPK2O00526 184 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 SOD3P08294 240 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 PDLIM4P50479 330 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 GNB1P62873 340 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 PRCDQ00LT1 54 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 LCE5AQ5TCM9 118 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 FAM71F2Q6NXP2 309 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 VKORC1L1Q8N0U8 176 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 LYG1Q8N1E2 194 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 ABHD12Q8N2K0 398 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 PNKDQ8N490 385 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 OR5B3Q8NH48 314 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 RNASEH2CQ8TDP1 164 aaKnown RBP6.36□□□□□ -1.39
CXCR4-201ENST00000241393 NEUROG1Q92886 237 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 C11orf52Q96A22 123 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 C19orf24Q9BVV8 132 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 GAL3ST2Q9H3Q3 398 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 BET1LQ9NYM9 111 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 MSRB1Q9NZV6 116 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 OR51B2Q9Y5P1 312 aa6.36□□□□□ -1.39
CXCR4-201ENST00000241393 A0A0A0MQY5 61 aa6.35□□□□□ -1.39
CXCR4-201ENST00000241393 ARL14EPLP0DKL9 152 aa6.35□□□□□ -1.39
CXCR4-201ENST00000241393 SELLP14151 372 aa6.35□□□□□ -1.39
CXCR4-201ENST00000241393 AREGP15514 252 aa6.35□□□□□ -1.39
CXCR4-201ENST00000241393 HIST1H1BP16401 226 aaKnown RBP6.35□□□□□ -1.39
CXCR4-201ENST00000241393 GCHFRP30047 84 aa6.35□□□□□ -1.39
CXCR4-201ENST00000241393 ATP5G3P48201 142 aa6.35□□□□□ -1.39
CXCR4-201ENST00000241393 C2orf83Q53S99 150 aa6.35□□□□□ -1.39
CXCR4-201ENST00000241393 GCSAMLQ5JQS6 135 aa6.35□□□□□ -1.39
CXCR4-201ENST00000241393 ACTL10Q5JWF8 245 aa6.35□□□□□ -1.39
CXCR4-201ENST00000241393 CST9LP1Q5W188 147 aa6.35□□□□□ -1.39
CXCR4-201ENST00000241393 MIC13Q5XKP0 118 aa6.35□□□□□ -1.39
CXCR4-201ENST00000241393 ZNF833PQ6ZTB9 187 aa6.35□□□□□ -1.39
CXCR4-201ENST00000241393 TMEM144Q7Z5S9 345 aa6.35□□□□□ -1.39
CXCR4-201ENST00000241393 RPRMLQ8N4K4 120 aa6.35□□□□□ -1.39
CXCR4-201ENST00000241393 C8orf31Q8N9H6 132 aa6.35□□□□□ -1.39
CXCR4-201ENST00000241393 OR10D4PQ8NGN7 298 aa6.35□□□□□ -1.39
CXCR4-201ENST00000241393 SLC35E1Q96K37 410 aa6.35□□□□□ -1.39
CXCR4-201ENST00000241393 PFDN5Q99471 154 aa6.35□□□□□ -1.39
CXCR4-201ENST00000241393 GPR61Q9BZJ8 451 aa6.35□□□□□ -1.39
CXCR4-201ENST00000241393 PLEKHA3Q9HB20 300 aa6.35□□□□□ -1.39
CXCR4-201ENST00000241393 PATZ1Q9HBE1 687 aaKnown RBP6.35□□□□□ -1.39
CXCR4-201ENST00000241393 SLC35D1Q9NTN3 355 aa6.35□□□□□ -1.39
CXCR4-201ENST00000241393 CADP27708 2225 aa6.34□□□□□ -1.39
CXCR4-201ENST00000241393 C9JCJ5 164 aa6.34□□□□□ -1.39
CXCR4-201ENST00000241393 C16orf97H3BN30 126 aa6.34□□□□□ -1.39
CXCR4-201ENST00000241393 MKRN2OSH3BPM6 223 aa6.34□□□□□ -1.39
CXCR4-201ENST00000241393 J3QR06 171 aa6.34□□□□□ -1.39
CXCR4-201ENST00000241393 DVL1O14640 695 aa6.34□□□□□ -1.39
CXCR4-201ENST00000241393 SLC25A17O43808 307 aa6.34□□□□□ -1.39
CXCR4-201ENST00000241393 DSCAMO60469 2012 aa6.34□□□□□ -1.39
CXCR4-201ENST00000241393 NDUFB4O95168 129 aa6.34□□□□□ -1.39
CXCR4-201ENST00000241393 CA2P00918 260 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms