RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 A0A1B0GV90 55 aa7.43□□□□□ -1.22
SYDE2-201ENST00000234668 SRP14P37108 136 aaKnown RBP7.43□□□□□ -1.22
SYDE2-201ENST00000234668 GATA4P43694 442 aa7.43□□□□□ -1.22
SYDE2-201ENST00000234668 RPL15P61313 204 aaKnown RBP7.43□□□□□ -1.22
SYDE2-201ENST00000234668 PRR20EP86478 221 aa7.43□□□□□ -1.22
SYDE2-201ENST00000234668 PRR20CP86479 221 aa7.43□□□□□ -1.22
SYDE2-201ENST00000234668 PRR20DP86480 221 aa7.43□□□□□ -1.22
SYDE2-201ENST00000234668 PRR20BP86481 221 aa7.43□□□□□ -1.22
SYDE2-201ENST00000234668 PRR20AP86496 221 aa7.43□□□□□ -1.22
SYDE2-201ENST00000234668 KRTCAP3Q53RY4 240 aa7.43□□□□□ -1.22
SYDE2-201ENST00000234668 IGFL3Q6UXB1 125 aa7.43□□□□□ -1.22
SYDE2-201ENST00000234668 GFRALQ6UXV0 394 aa7.43□□□□□ -1.22
SYDE2-201ENST00000234668 OR8I2Q8N0Y5 310 aa7.43□□□□□ -1.22
SYDE2-201ENST00000234668 SFXN3Q9BWM7 321 aa7.43□□□□□ -1.22
SYDE2-201ENST00000234668 SERTAD4Q9NUC0 356 aa7.43□□□□□ -1.22
SYDE2-201ENST00000234668 SLC45A2Q9UMX9 530 aa7.43□□□□□ -1.22
SYDE2-201ENST00000234668 PRRG2O14669 202 aa7.42□□□□□ -1.22
SYDE2-201ENST00000234668 SLC25A17O43808 307 aa7.42□□□□□ -1.22
SYDE2-201ENST00000234668 DDTP30046 118 aa7.42□□□□□ -1.22
SYDE2-201ENST00000234668 KIR2DS2P43631 304 aa7.42□□□□□ -1.22
SYDE2-201ENST00000234668 PRCDQ00LT1 54 aa7.42□□□□□ -1.22
SYDE2-201ENST00000234668 JOSD1Q15040 202 aaPredicted RBP7.42□□□□□ -1.22
SYDE2-201ENST00000234668 CENPWQ5EE01 88 aa7.42□□□□□ -1.22
SYDE2-201ENST00000234668 NPIPB3Q92617 1050 aa7.42□□□□□ -1.22
SYDE2-201ENST00000234668 SSBP3Q9BWW4 388 aaPredicted RBP7.42□□□□□ -1.22
SYDE2-201ENST00000234668 GSX1Q9H4S2 264 aaPredicted RBP7.42□□□□□ -1.22
SYDE2-201ENST00000234668 ZFHX3Q15911 3703 aa7.42□□□□□ -1.22
SYDE2-201ENST00000234668 TRGV8A0A0C4DH27 118 aa7.42□□□□□ -1.22
SYDE2-201ENST00000234668 HELTA6NFD8 242 aa7.42□□□□□ -1.22
SYDE2-201ENST00000234668 FAM90A9PA6NNJ1 464 aa7.42□□□□□ -1.22
SYDE2-201ENST00000234668 GGTLC3B5MD39 225 aa7.42□□□□□ -1.22
SYDE2-201ENST00000234668 TGOLN2O43493 480 aa7.42□□□□□ -1.22
SYDE2-201ENST00000234668 LY6HO94772 140 aa7.42□□□□□ -1.22
SYDE2-201ENST00000234668 CRYABP02511 175 aaKnown RBP7.42□□□□□ -1.22
SYDE2-201ENST00000234668 RNF224P0DH78 156 aa7.42□□□□□ -1.22
SYDE2-201ENST00000234668 RNASE2P10153 161 aaKnown RBP7.42□□□□□ -1.22
SYDE2-201ENST00000234668 CNTFRP26992 372 aa7.42□□□□□ -1.22
SYDE2-201ENST00000234668 RPL29P47914 159 aaKnown RBP7.42□□□□□ -1.22
SYDE2-201ENST00000234668 RAB4BP61018 213 aa7.42□□□□□ -1.22
SYDE2-201ENST00000234668 ZNF714Q96N38 554 aa7.42□□□□□ -1.22
SYDE2-201ENST00000234668 FNDC4Q9H6D8 234 aaPredicted RBP7.42□□□□□ -1.22
SYDE2-201ENST00000234668 CTSZQ9UBR2 303 aa7.42□□□□□ -1.22
SYDE2-201ENST00000234668 PRNDQ9UKY0 176 aa7.42□□□□□ -1.22
SYDE2-201ENST00000234668 PPIAL4EA0A075B759 164 aa7.41□□□□□ -1.22
SYDE2-201ENST00000234668 PPIAL4DF5H284 164 aa7.41□□□□□ -1.22
SYDE2-201ENST00000234668 PPIAL4FP0DN26 164 aa7.41□□□□□ -1.22
SYDE2-201ENST00000234668 WT1-ASQ06250 92 aa7.41□□□□□ -1.22
SYDE2-201ENST00000234668 TMEM144Q7Z5S9 345 aa7.41□□□□□ -1.22
SYDE2-201ENST00000234668 C1orf174Q8IYL3 243 aa7.41□□□□□ -1.22
SYDE2-201ENST00000234668 FLYWCH2Q96CP2 140 aaKnown RBP7.41□□□□□ -1.22
SYDE2-201ENST00000234668 EAF1Q96JC9 268 aaPredicted RBP7.41□□□□□ -1.22
SYDE2-201ENST00000234668 RPH3ALQ9UNE2 315 aa7.41□□□□□ -1.22
SYDE2-201ENST00000234668 PPIAL4AQ9Y536 164 aa7.41□□□□□ -1.22
SYDE2-201ENST00000234668 H0YJW9 148 aa7.41□□□□□ -1.22
SYDE2-201ENST00000234668 TDRG1Q3Y452 100 aa7.41□□□□□ -1.22
SYDE2-201ENST00000234668 MRPL54Q6P161 138 aaKnown RBP7.41□□□□□ -1.22
SYDE2-201ENST00000234668 FCN1O00602 326 aa7.41□□□□□ -1.22
SYDE2-201ENST00000234668 MOSP00540 346 aa7.41□□□□□ -1.22
SYDE2-201ENST00000234668 OR5G3P0C626 314 aa7.41□□□□□ -1.22
SYDE2-201ENST00000234668 TNFRSF1AP19438 455 aa7.41□□□□□ -1.22
SYDE2-201ENST00000234668 GNG4P50150 75 aa7.41□□□□□ -1.22
SYDE2-201ENST00000234668 RPL8P62917 257 aaKnown RBP7.41□□□□□ -1.22
SYDE2-201ENST00000234668 USF2Q15853 346 aaPredicted RBP7.41□□□□□ -1.22
SYDE2-201ENST00000234668 Q8NA96 180 aa7.41□□□□□ -1.22
SYDE2-201ENST00000234668 OR1L6Q8NGR2 347 aa7.41□□□□□ -1.22
SYDE2-201ENST00000234668 FAM168AQ92567 244 aa7.41□□□□□ -1.22
SYDE2-201ENST00000234668 FAM103A1Q9BTL3 118 aaKnown RBP7.41□□□□□ -1.22
SYDE2-201ENST00000234668 ZNF430Q9H8G1 570 aaPredicted RBP7.41□□□□□ -1.22
SYDE2-201ENST00000234668 DYNLRB1Q9NP97 96 aa7.41□□□□□ -1.22
SYDE2-201ENST00000234668 NKX6-3A6NJ46 265 aa7.4□□□□□ -1.22
SYDE2-201ENST00000234668 CGB1A6NKQ9 187 aa7.4□□□□□ -1.22
SYDE2-201ENST00000234668 ZNF705FA8MVS1 300 aaPredicted RBP7.4□□□□□ -1.22
SYDE2-201ENST00000234668 TSTD3H0UI37 97 aa7.4□□□□□ -1.22
SYDE2-201ENST00000234668 MKRN2OSH3BPM6 223 aa7.4□□□□□ -1.22
SYDE2-201ENST00000234668 FAM87AP0C7U9 286 aa7.4□□□□□ -1.22
SYDE2-201ENST00000234668 ZNF705DP0CH99 300 aaPredicted RBP7.4□□□□□ -1.22
SYDE2-201ENST00000234668 ZNF705BP0CI00 300 aaPredicted RBP7.4□□□□□ -1.22
SYDE2-201ENST00000234668 ORM2P19652 201 aa7.4□□□□□ -1.22
SYDE2-201ENST00000234668 LEMD1Q68G75 181 aa7.4□□□□□ -1.22
SYDE2-201ENST00000234668 PRR27Q6MZM9 219 aa7.4□□□□□ -1.22
SYDE2-201ENST00000234668 MMD2Q8IY49 270 aa7.4□□□□□ -1.22
SYDE2-201ENST00000234668 ST6GALNAC3Q8NDV1 305 aa7.4□□□□□ -1.22
SYDE2-201ENST00000234668 LINC01560Q8TB33 94 aa7.4□□□□□ -1.22
SYDE2-201ENST00000234668 BLNKQ8WV28 456 aa7.4□□□□□ -1.22
SYDE2-201ENST00000234668 TMEM18Q96B42 140 aa7.4□□□□□ -1.22
SYDE2-201ENST00000234668 ADTRPQ96IZ2 230 aa7.4□□□□□ -1.22
SYDE2-201ENST00000234668 MRPL18Q9H0U6 180 aaKnown RBP7.4□□□□□ -1.22
SYDE2-201ENST00000234668 LINC00312Q9Y6C7 94 aa7.4□□□□□ -1.22
SYDE2-201ENST00000234668 CELSR1Q9NYQ6 3014 aa7.4□□□□□ -1.22
SYDE2-201ENST00000234668 SNURFLB1AK76 121 aa7.4□□□□□ -1.23
SYDE2-201ENST00000234668 TMEM178BH3BS89 294 aa7.4□□□□□ -1.23
SYDE2-201ENST00000234668 NDUFB3O43676 98 aa7.4□□□□□ -1.23
SYDE2-201ENST00000234668 TOX4O94842 621 aa7.4□□□□□ -1.23
SYDE2-201ENST00000234668 APOA2P02652 100 aa7.4□□□□□ -1.23
SYDE2-201ENST00000234668 GRNP28799 593 aaKnown RBP7.4□□□□□ -1.23
SYDE2-201ENST00000234668 PKIAP61925 76 aa7.4□□□□□ -1.23
SYDE2-201ENST00000234668 FOXC1Q12948 553 aa7.4□□□□□ -1.23
SYDE2-201ENST00000234668 FOXL1Q12952 345 aa7.4□□□□□ -1.23
SYDE2-201ENST00000234668 SSX2Q16385 188 aa7.4□□□□□ -1.23
SYDE2-201ENST00000234668 PRSS33Q8NF86 280 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms