RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 GGCTO75223 188 aaKnown RBP8.69□□□□□ -1.02
SF3B6-201ENST00000233468 IFNA21P01568 189 aa8.69□□□□□ -1.02
SF3B6-201ENST00000233468 TCRBP04435 133 aa8.69□□□□□ -1.02
SF3B6-201ENST00000233468 OR4E1P0C645 316 aa8.69□□□□□ -1.02
SF3B6-201ENST00000233468 IGLL1P15814 213 aa8.69□□□□□ -1.02
SF3B6-201ENST00000233468 HOXD3P31249 432 aaPredicted RBP8.69□□□□□ -1.02
SF3B6-201ENST00000233468 BTCP35070 178 aa8.69□□□□□ -1.02
SF3B6-201ENST00000233468 HTR2BP41595 481 aa8.69□□□□□ -1.02
SF3B6-201ENST00000233468 IZUMO4Q1ZYL8 232 aa8.69□□□□□ -1.02
SF3B6-201ENST00000233468 LYZL2Q7Z4W2 148 aa8.69□□□□□ -1.02
SF3B6-201ENST00000233468 LYG2Q86SG7 212 aa8.69□□□□□ -1.02
SF3B6-201ENST00000233468 OR1S1Q8NH92 325 aa8.69□□□□□ -1.02
SF3B6-201ENST00000233468 ENKURQ8TC29 256 aa8.69□□□□□ -1.02
SF3B6-201ENST00000233468 A0A0G2JRQ6 117 aa8.68□□□□□ -1.02
SF3B6-201ENST00000233468 LOC100996750A0A140TA64 210 aa8.68□□□□□ -1.02
SF3B6-201ENST00000233468 SEC14L6B5MCN3 397 aa8.68□□□□□ -1.02
SF3B6-201ENST00000233468 SCGB2A1O75556 95 aa8.68□□□□□ -1.02
SF3B6-201ENST00000233468 MED6O75586 246 aa8.68□□□□□ -1.02
SF3B6-201ENST00000233468 NDUFB8O95169 186 aa8.68□□□□□ -1.02
SF3B6-201ENST00000233468 LY86O95711 162 aa8.68□□□□□ -1.02
SF3B6-201ENST00000233468 ATP5IP56385 69 aaPredicted RBP8.68□□□□□ -1.02
SF3B6-201ENST00000233468 DHRS2Q13268 280 aa8.68□□□□□ -1.02
SF3B6-201ENST00000233468 FAM106AQ4KMX7 169 aa8.68□□□□□ -1.02
SF3B6-201ENST00000233468 NMSQ5H8A3 153 aa8.68□□□□□ -1.02
SF3B6-201ENST00000233468 Q6ZRM9 215 aa8.68□□□□□ -1.02
SF3B6-201ENST00000233468 REC114Q7Z4M0 266 aa8.68□□□□□ -1.02
SF3B6-201ENST00000233468 DCUN1D4Q92564 292 aa8.68□□□□□ -1.02
SF3B6-201ENST00000233468 OR4C12Q96R67 309 aa8.68□□□□□ -1.02
SF3B6-201ENST00000233468 KRTAP4-6Q9BYQ5 205 aa8.68□□□□□ -1.02
SF3B6-201ENST00000233468 HEYLQ9NQ87 328 aaPredicted RBP8.68□□□□□ -1.02
SF3B6-201ENST00000233468 PEMTQ9UBM1 199 aa8.68□□□□□ -1.02
SF3B6-201ENST00000233468 FLVCR2Q9UPI3 526 aa8.68□□□□□ -1.02
SF3B6-201ENST00000233468 FAM90A26D6RGX4 464 aa8.67□□□□□ -1.02
SF3B6-201ENST00000233468 CLEC3BP05452 202 aa8.67□□□□□ -1.02
SF3B6-201ENST00000233468 H2AFB2P0C5Z0 115 aa8.67□□□□□ -1.02
SF3B6-201ENST00000233468 ANXA7P20073 488 aaKnown RBP8.67□□□□□ -1.02
SF3B6-201ENST00000233468 ARL3P36405 182 aa8.67□□□□□ -1.02
SF3B6-201ENST00000233468 SLURP1P55000 103 aa8.67□□□□□ -1.02
SF3B6-201ENST00000233468 DEFA5Q01523 94 aa8.67□□□□□ -1.02
SF3B6-201ENST00000233468 TNFRSF9Q07011 255 aa8.67□□□□□ -1.02
SF3B6-201ENST00000233468 KLF5Q13887 457 aaPredicted RBP8.67□□□□□ -1.02
SF3B6-201ENST00000233468 ANKRD55Q3KP44 614 aa8.67□□□□□ -1.02
SF3B6-201ENST00000233468 SPSB3Q6PJ21 355 aa8.67□□□□□ -1.02
SF3B6-201ENST00000233468 CLEC19AQ6UXS0 136 aa8.67□□□□□ -1.02
SF3B6-201ENST00000233468 C19orf35Q6ZS72 473 aa8.67□□□□□ -1.02
SF3B6-201ENST00000233468 MRAPQ8TCY5 172 aa8.67□□□□□ -1.02
SF3B6-201ENST00000233468 DLX4Q92988 240 aaPredicted RBP8.67□□□□□ -1.02
SF3B6-201ENST00000233468 MISP3Q96FF7 219 aa8.67□□□□□ -1.02
SF3B6-201ENST00000233468 BSCL2Q96G97 398 aaPredicted RBP8.67□□□□□ -1.02
SF3B6-201ENST00000233468 TXN2Q99757 166 aa8.67□□□□□ -1.02
SF3B6-201ENST00000233468 NUDT15Q9NV35 164 aa8.67□□□□□ -1.02
SF3B6-201ENST00000233468 C21orf62Q9NYP8 219 aa8.67□□□□□ -1.02
SF3B6-201ENST00000233468 PRR13Q9NZ81 148 aa8.67□□□□□ -1.02
SF3B6-201ENST00000233468 U3KQ87 197 aa8.67□□□□□ -1.02
SF3B6-201ENST00000233468 DNAH3Q8TD57 4116 aa8.66□□□□□ -1.02
SF3B6-201ENST00000233468 TRAV6A0A075B6T7 132 aa8.66□□□□□ -1.02
SF3B6-201ENST00000233468 RPS10-NUDT3A0A1W2PQS6 291 aa8.66□□□□□ -1.02
SF3B6-201ENST00000233468 SAP30O75446 220 aa8.66□□□□□ -1.02
SF3B6-201ENST00000233468 HOXB5P09067 269 aa8.66□□□□□ -1.02
SF3B6-201ENST00000233468 MFAP4P55083 255 aa8.66□□□□□ -1.02
SF3B6-201ENST00000233468 RPP30P78346 268 aaKnown RBP8.66□□□□□ -1.02
SF3B6-201ENST00000233468 DCTN2Q13561 401 aaKnown RBP8.66□□□□□ -1.02
SF3B6-201ENST00000233468 SPINK9Q5DT21 86 aa8.66□□□□□ -1.02
SF3B6-201ENST00000233468 PLET1Q6UQ28 207 aa8.66□□□□□ -1.02
SF3B6-201ENST00000233468 ZNF502Q8TBZ5 544 aa8.66□□□□□ -1.02
SF3B6-201ENST00000233468 MITD1Q8WV92 249 aa8.66□□□□□ -1.02
SF3B6-201ENST00000233468 CIB3Q96Q77 187 aaPredicted RBP8.66□□□□□ -1.02
SF3B6-201ENST00000233468 GPN1Q9HCN4 374 aaPredicted RBP8.66□□□□□ -1.02
SF3B6-201ENST00000233468 AURKAIP1Q9NWT8 199 aaPredicted RBP8.66□□□□□ -1.02
SF3B6-201ENST00000233468 HSPB7Q9UBY9 170 aa8.66□□□□□ -1.02
SF3B6-201ENST00000233468 TBC1D24Q9ULP9 559 aa8.66□□□□□ -1.02
SF3B6-201ENST00000233468 KMT2CQ8NEZ4 4911 aaKnown RBP8.66□□□□□ -1.02
SF3B6-201ENST00000233468 MFSD2BA6NFX1 497 aa8.65□□□□□ -1.02
SF3B6-201ENST00000233468 BMPR1BO00238 502 aa8.65□□□□□ -1.02
SF3B6-201ENST00000233468 NUPL2O15504 423 aaKnown RBP8.65□□□□□ -1.02
SF3B6-201ENST00000233468 MT-CO2P00403 227 aa8.65□□□□□ -1.02
SF3B6-201ENST00000233468 FCGR2BP31994 310 aaPredicted RBP8.65□□□□□ -1.02
SF3B6-201ENST00000233468 NPBWR1P48145 328 aa8.65□□□□□ -1.02
SF3B6-201ENST00000233468 SYNJ2BPP57105 145 aa8.65□□□□□ -1.02
SF3B6-201ENST00000233468 Q56UQ5 140 aa8.65□□□□□ -1.02
SF3B6-201ENST00000233468 GGNBP1Q5YKI7 109 aa8.65□□□□□ -1.02
SF3B6-201ENST00000233468 ETFRF1Q6IPR1 90 aa8.65□□□□□ -1.02
SF3B6-201ENST00000233468 ACSM6Q6P461 480 aa8.65□□□□□ -1.02
SF3B6-201ENST00000233468 GPHB5Q86YW7 130 aa8.65□□□□□ -1.02
SF3B6-201ENST00000233468 DUSP18Q8NEJ0 188 aa8.65□□□□□ -1.02
SF3B6-201ENST00000233468 SLC24A4Q8NFF2 622 aa8.65□□□□□ -1.02
SF3B6-201ENST00000233468 OR9G4Q8NGQ1 327 aa8.65□□□□□ -1.02
SF3B6-201ENST00000233468 RNASEH2CQ8TDP1 164 aaKnown RBP8.65□□□□□ -1.02
SF3B6-201ENST00000233468 DTD1Q8TEA8 209 aa8.65□□□□□ -1.02
SF3B6-201ENST00000233468 SCARB1Q8WTV0 552 aa8.65□□□□□ -1.02
SF3B6-201ENST00000233468 PINX1Q96BK5 328 aaKnown RBP8.65□□□□□ -1.02
SF3B6-201ENST00000233468 PALMDQ9NP74 551 aa8.65□□□□□ -1.02
SF3B6-201ENST00000233468 DMRT1Q9Y5R6 373 aa8.65□□□□□ -1.02
SF3B6-201ENST00000233468 I3L2K1 104 aa8.64□□□□□ -1.03
SF3B6-201ENST00000233468 K7EIM0 57 aa8.64□□□□□ -1.03
SF3B6-201ENST00000233468 WRBO00258 174 aa8.64□□□□□ -1.03
SF3B6-201ENST00000233468 TGOLN2O43493 480 aa8.64□□□□□ -1.03
SF3B6-201ENST00000233468 PRAF2O60831 178 aa8.64□□□□□ -1.03
SF3B6-201ENST00000233468 PITX3O75364 302 aa8.64□□□□□ -1.03
SF3B6-201ENST00000233468 IFNA10P01566 189 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms