RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 CTLA4P16410 223 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 RPS4XP62701 263 aaKnown RBP4.73□□□□□ -1.65
RFX4-201ENST00000229387 SLC35B1P78383 322 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 MFAP5Q13361 173 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 FOXE3Q13461 319 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 KLF5Q13887 457 aaPredicted RBP4.73□□□□□ -1.65
RFX4-201ENST00000229387 WFDC2Q14508 124 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 ZNF141Q15928 474 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 SPEM1Q8N4L4 309 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 GTSF1Q8WW33 167 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 ST6GALNAC6Q969X2 333 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 TMEM191AQ9H0A3 160 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 RABAC1Q9UI14 185 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 DUSP13Q9UII6 198 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 COA3Q9Y2R0 106 aaPredicted RBP4.73□□□□□ -1.65
RFX4-201ENST00000229387 TRAV36DV7A0A075B6V5 113 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 IGKV1D-43A0A0B4J1Z2 117 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 A0A1W2PRX2 142 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 ZNF823P16415 610 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 ALOX5APP20292 161 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 NXPH1P58417 271 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 RPS28P62857 69 aaKnown RBP4.73□□□□□ -1.65
RFX4-201ENST00000229387 ZNF90Q03938 601 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 TEPPQ6URK8 271 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 ZNF841Q6ZN19 808 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 OR4C12Q96R67 309 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 UBTD1Q9HAC8 227 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 ALKBH4Q9NXW9 302 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 B9D1Q9UPM9 204 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 TMEM14AQ9Y6G1 99 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 CACNA1GO43497 2377 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 MDFIC2A0A1B0GVS7 189 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 F5H768 121 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 KLF7O75840 302 aaPredicted RBP4.73□□□□□ -1.65
RFX4-201ENST00000229387 UNC119Q13432 240 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 DIAPH2-AS1Q14236 149 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 C11orf44Q8N8P7 122 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 KIR2DL5BQ8NHK3 375 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 ASCL2Q99929 193 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 C20orf78Q9BR46 151 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 NAA60Q9H7X0 242 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 KLRF1Q9NZS2 232 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 OR2W1Q9Y3N9 320 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 ARL2-SNX15V9GYD0 113 aa4.73□□□□□ -1.65
RFX4-201ENST00000229387 CPAMD8Q8IZJ3 1885 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 TMED7-TICAM2A0A0A6YYA0 188 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 IGHV3-15A0A0B4J1V0 119 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 FOXI3A8MTJ6 420 aaPredicted RBP4.72□□□□□ -1.65
RFX4-201ENST00000229387 MPIG6BO95866 241 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 IGHV3-7P01780 117 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 SPINK2P20155 84 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 CDAP32320 146 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 CX3CL1P78423 397 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 ARFRP1Q13795 201 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 CR1LQ2VPA4 569 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 LINC00114Q6XXX2 140 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 TMEM136Q6ZRR5 245 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 FAM19A2Q8N3H0 131 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 OR4X2Q8NGF9 303 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 OR9G4Q8NGQ1 327 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 OR13C6PQ8NH95 151 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 OSR1Q8TAX0 266 aaPredicted RBP4.72□□□□□ -1.65
RFX4-201ENST00000229387 PSMG3-AS1Q96PY0 264 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 MRPL32Q9BYC8 188 aaKnown RBP4.72□□□□□ -1.65
RFX4-201ENST00000229387 ZNF286AQ9HBT8 521 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 BEX4Q9NWD9 120 aaPredicted RBP4.72□□□□□ -1.65
RFX4-201ENST00000229387 OCIAD1Q9NX40 245 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 PRO0461Q9UI25 63 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 PRSS37A4D1T9 235 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 TMEM14DPA8MWL7 114 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 SCRG1O75711 98 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 HLA-DQA1P01909 254 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 SMIM13P0DJ93 91 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 GP1BBP13224 206 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 IER3P46695 156 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 KCTD18Q6PI47 426 aaPredicted RBP4.72□□□□□ -1.65
RFX4-201ENST00000229387 RNF144BQ7Z419 303 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 LYZL2Q7Z4W2 148 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 PLXDC1Q8IUK5 500 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 MDFICQ9P1T7 246 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 TIMM9Q9Y5J7 89 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 LY96Q9Y6Y9 160 aa4.72□□□□□ -1.65
RFX4-201ENST00000229387 CXorf1O96002 111 aa4.71□□□□□ -1.65
RFX4-201ENST00000229387 IGKV3-11P04433 115 aa4.71□□□□□ -1.65
RFX4-201ENST00000229387 CCL4P13236 92 aa4.71□□□□□ -1.65
RFX4-201ENST00000229387 ZNF20P17024 532 aa4.71□□□□□ -1.65
RFX4-201ENST00000229387 BLVRBP30043 206 aaPredicted RBP4.71□□□□□ -1.65
RFX4-201ENST00000229387 PI4KAP42356 2102 aa4.71□□□□□ -1.65
RFX4-201ENST00000229387 RPEL1Q2QD12 228 aa4.71□□□□□ -1.65
RFX4-201ENST00000229387 ETDBQ3ZM63 59 aa4.71□□□□□ -1.65
RFX4-201ENST00000229387 FNDC7Q5VTL7 733 aa4.71□□□□□ -1.65
RFX4-201ENST00000229387 C1orf140Q5VVS0 124 aa4.71□□□□□ -1.65
RFX4-201ENST00000229387 OR1F12Q8NHA8 337 aa4.71□□□□□ -1.65
RFX4-201ENST00000229387 LHX4Q969G2 390 aa4.71□□□□□ -1.65
RFX4-201ENST00000229387 TXNDC17Q9BRA2 123 aa4.71□□□□□ -1.65
RFX4-201ENST00000229387 COL25A1Q9BXS0 654 aaPredicted RBP4.71□□□□□ -1.65
RFX4-201ENST00000229387 TP73-AS1Q9UF72 201 aa4.71□□□□□ -1.65
RFX4-201ENST00000229387 SOX21Q9Y651 276 aaPredicted RBP4.71□□□□□ -1.65
RFX4-201ENST00000229387 TMEM131Q92545 1883 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 hDV102S1A0JD36 115 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms