RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 PYGO2Q9BRQ0 406 aa15.39■□□□□ 0.05
YBX3-201ENST00000228251 FUT9Q9Y231 359 aa15.39■□□□□ 0.05
YBX3-201ENST00000228251 FOXH1O75593 365 aa15.38■□□□□ 0.05
YBX3-201ENST00000228251 RPS10P46783 165 aaKnown RBP15.38■□□□□ 0.05
YBX3-201ENST00000228251 MIR17HGQ75NE6 70 aa15.38■□□□□ 0.05
YBX3-201ENST00000228251 C16orf82Q7Z2V1 217 aa15.38■□□□□ 0.05
YBX3-201ENST00000228251 ZNF114Q8NC26 417 aa15.38■□□□□ 0.05
YBX3-201ENST00000228251 NANPQ8TBE9 248 aa15.38■□□□□ 0.05
YBX3-201ENST00000228251 ARL2-SNX15V9GYD0 113 aa15.38■□□□□ 0.05
YBX3-201ENST00000228251 CLN5O75503 358 aa15.37■□□□□ 0.05
YBX3-201ENST00000228251 LIPFP07098 398 aa15.37■□□□□ 0.05
YBX3-201ENST00000228251 CNTFRP26992 372 aa15.37■□□□□ 0.05
YBX3-201ENST00000228251 PSG5Q15238 335 aa15.37■□□□□ 0.05
YBX3-201ENST00000228251 CST9LP1Q5W188 147 aa15.37■□□□□ 0.05
YBX3-201ENST00000228251 OR2T6Q8NHC8 308 aa15.37■□□□□ 0.05
YBX3-201ENST00000228251 ZNF503Q96F45 646 aa15.37■□□□□ 0.05
YBX3-201ENST00000228251 DERL1Q9BUN8 251 aa15.37■□□□□ 0.05
YBX3-201ENST00000228251 C19orf24Q9BVV8 132 aa15.37■□□□□ 0.05
YBX3-201ENST00000228251 PHOX2AO14813 284 aa15.36■□□□□ 0.05
YBX3-201ENST00000228251 GATA2P23769 480 aaPredicted RBP15.36■□□□□ 0.05
YBX3-201ENST00000228251 FAM78BQ5VT40 261 aa15.36■□□□□ 0.05
YBX3-201ENST00000228251 MMD2Q8IY49 270 aa15.36■□□□□ 0.05
YBX3-201ENST00000228251 THAP8Q8NA92 274 aa15.36■□□□□ 0.05
YBX3-201ENST00000228251 C11orf52Q96A22 123 aa15.36■□□□□ 0.05
YBX3-201ENST00000228251 SIGLEC9Q9Y336 463 aa15.36■□□□□ 0.05
YBX3-201ENST00000228251 AMMECR1Q9Y4X0 333 aaPredicted RBP15.36■□□□□ 0.05
YBX3-201ENST00000228251 INSIG2Q9Y5U4 225 aa15.36■□□□□ 0.05
YBX3-201ENST00000228251 ARHGAP32A7KAX9 2087 aa15.36■□□□□ 0.05
YBX3-201ENST00000228251 TACC2O95359 2948 aa15.36■□□□□ 0.05
YBX3-201ENST00000228251 TRBV20OR9-2A0A075B6H5 130 aa15.36■□□□□ 0.05
YBX3-201ENST00000228251 IGKV1D-37A0A075B6S9 117 aa15.36■□□□□ 0.05
YBX3-201ENST00000228251 ENSAO43768 121 aaKnown RBP15.36■□□□□ 0.05
YBX3-201ENST00000228251 NDUFB4O95168 129 aa15.36■□□□□ 0.05
YBX3-201ENST00000228251 CRYGCP07315 174 aa15.36■□□□□ 0.05
YBX3-201ENST00000228251 RPL35P42766 123 aaKnown RBP15.36■□□□□ 0.05
YBX3-201ENST00000228251 SSBP2P81877 361 aaPredicted RBP15.36■□□□□ 0.05
YBX3-201ENST00000228251 LINC01551Q86U37 167 aa15.36■□□□□ 0.05
YBX3-201ENST00000228251 OR11H6Q8NGC7 330 aa15.36■□□□□ 0.05
YBX3-201ENST00000228251 FAM210BQ96KR6 192 aa15.36■□□□□ 0.05
YBX3-201ENST00000228251 AREGP15514 252 aa15.35■□□□□ 0.05
YBX3-201ENST00000228251 COX7A1P24310 79 aa15.35■□□□□ 0.05
YBX3-201ENST00000228251 TMEM37Q8WXS4 190 aa15.35■□□□□ 0.05
YBX3-201ENST00000228251 TIMD4Q96H15 378 aa15.35■□□□□ 0.05
YBX3-201ENST00000228251 CHODLQ9H9P2 273 aa15.35■□□□□ 0.05
YBX3-201ENST00000228251 MRPL36Q9P0J6 103 aaKnown RBP15.35■□□□□ 0.05
YBX3-201ENST00000228251 SPTBN1Q01082 2364 aaKnown RBP15.34■□□□□ 0.05
YBX3-201ENST00000228251 SCO2A0A1W2PP80 73 aa15.34■□□□□ 0.05
YBX3-201ENST00000228251 AP4M1O00189 453 aa15.34■□□□□ 0.05
YBX3-201ENST00000228251 COMPP49747 757 aaPredicted RBP15.34■□□□□ 0.05
YBX3-201ENST00000228251 SUB1P53999 127 aaKnown RBP eCLIP15.34■□□□□ 0.052e-9■■■■■ 67.4
YBX3-201ENST00000228251 MFAP2P55001 183 aa15.34■□□□□ 0.05
YBX3-201ENST00000228251 PAX2Q02962 417 aa15.34■□□□□ 0.05
YBX3-201ENST00000228251 KIAA0141Q14154 515 aaPredicted RBP15.34■□□□□ 0.05
YBX3-201ENST00000228251 HCP5Q6MZN7 132 aa15.34■□□□□ 0.05
YBX3-201ENST00000228251 ANAPC16Q96DE5 110 aa15.34■□□□□ 0.05
YBX3-201ENST00000228251 RNF5Q99942 180 aa15.34■□□□□ 0.05
YBX3-201ENST00000228251 S100A6P06703 90 aa15.34■□□□□ 0.05
YBX3-201ENST00000228251 ITLN2Q8WWU7 325 aaPredicted RBP15.34■□□□□ 0.05
YBX3-201ENST00000228251 M0R1W7 72 aa15.33■□□□□ 0.04
YBX3-201ENST00000228251 ACTL6BO94805 426 aa15.33■□□□□ 0.04
YBX3-201ENST00000228251 CD99P14209 185 aa15.33■□□□□ 0.04
YBX3-201ENST00000228251 RPL27AP46776 148 aaKnown RBP15.33■□□□□ 0.04
YBX3-201ENST00000228251 AKR1D1P51857 326 aa15.33■□□□□ 0.04
YBX3-201ENST00000228251 ACY3Q96HD9 319 aa15.33■□□□□ 0.04
YBX3-201ENST00000228251 FAM167A-AS1Q96KT0 104 aa15.33■□□□□ 0.04
YBX3-201ENST00000228251 SLC25A33Q9BSK2 321 aa15.33■□□□□ 0.04
YBX3-201ENST00000228251 TECRQ9NZ01 308 aaKnown RBP15.33■□□□□ 0.04
YBX3-201ENST00000228251 ONECUT1Q9UBC0 465 aa15.33■□□□□ 0.04
YBX3-201ENST00000228251 ODF3BA8MYP8 253 aa15.32■□□□□ 0.04
YBX3-201ENST00000228251 TEX22C9J3V5 150 aa15.32■□□□□ 0.04
YBX3-201ENST00000228251 H7BYZ3 331 aa15.32■□□□□ 0.04
YBX3-201ENST00000228251 TGOLN2O43493 480 aa15.32■□□□□ 0.04
YBX3-201ENST00000228251 MT-CO2P00403 227 aa15.32■□□□□ 0.04
YBX3-201ENST00000228251 FABP9Q0Z7S8 132 aa15.32■□□□□ 0.04
YBX3-201ENST00000228251 C4orf17Q53FE4 359 aa15.32■□□□□ 0.04
YBX3-201ENST00000228251 TPTE2P1Q5T6R2 138 aa15.32■□□□□ 0.04
YBX3-201ENST00000228251 PQLC2Q6ZP29 291 aa15.32■□□□□ 0.04
YBX3-201ENST00000228251 PPP1R27Q86WC6 154 aa15.32■□□□□ 0.04
YBX3-201ENST00000228251 RPEQ96AT9 228 aa15.32■□□□□ 0.04
YBX3-201ENST00000228251 MRPL32Q9BYC8 188 aaKnown RBP15.32■□□□□ 0.04
YBX3-201ENST00000228251 TMEM167BQ9NRX6 74 aa15.32■□□□□ 0.04
YBX3-201ENST00000228251 TCRBV4S1A1TA0A5B7 111 aa15.31■□□□□ 0.04
YBX3-201ENST00000228251 A6NNC1 897 aa15.31■□□□□ 0.04
YBX3-201ENST00000228251 RUSC1-AS1Q66K80 236 aa15.31■□□□□ 0.04
YBX3-201ENST00000228251 CFHR4Q92496 578 aa15.31■□□□□ 0.04
YBX3-201ENST00000228251 ELOVL1Q9BW60 279 aa15.31■□□□□ 0.04
YBX3-201ENST00000228251 SSBP3Q9BWW4 388 aaPredicted RBP15.31■□□□□ 0.04
YBX3-201ENST00000228251 ZNF98A6NK75 572 aa15.31■□□□□ 0.04
YBX3-201ENST00000228251 TRGC2P03986 189 aa15.31■□□□□ 0.04
YBX3-201ENST00000228251 REG1AP05451 166 aa15.31■□□□□ 0.04
YBX3-201ENST00000228251 TNXAQ16473 311 aa15.31■□□□□ 0.04
YBX3-201ENST00000228251 NPIPB3Q92617 1050 aa15.31■□□□□ 0.04
YBX3-201ENST00000228251 PKD1L2Q7Z442 2459 aa15.3■□□□□ 0.04
YBX3-201ENST00000228251 HIST1H2BKO60814 126 aa15.3■□□□□ 0.04
YBX3-201ENST00000228251 GGCTO75223 188 aaKnown RBP15.3■□□□□ 0.04
YBX3-201ENST00000228251 HIST1H2BJP06899 126 aa15.3■□□□□ 0.04
YBX3-201ENST00000228251 HIST1H2BOP23527 126 aa15.3■□□□□ 0.04
YBX3-201ENST00000228251 PRTN3P24158 256 aa15.3■□□□□ 0.04
YBX3-201ENST00000228251 HIST1H2BBP33778 126 aa15.3■□□□□ 0.04
YBX3-201ENST00000228251 GALR1P47211 349 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms