RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 LTBRP36941 435 aa12.53□□□□□ -0.4
UBR5-201ENST00000220959 Q5PR19 223 aa12.53□□□□□ -0.4
UBR5-201ENST00000220959 S100A7L2Q5SY68 101 aa12.53□□□□□ -0.4
UBR5-201ENST00000220959 POC1AQ8NBT0 407 aa12.53□□□□□ -0.4
UBR5-201ENST00000220959 TRAV14DV4A0A0A6YYC5 116 aa12.53□□□□□ -0.4
UBR5-201ENST00000220959 C1QCP02747 245 aa12.53□□□□□ -0.4
UBR5-201ENST00000220959 CA1P00915 261 aaPredicted RBP12.53□□□□□ -0.4
UBR5-201ENST00000220959 CDKN1AP38936 164 aa12.53□□□□□ -0.4
UBR5-201ENST00000220959 CACNG8Q8WXS5 425 aa12.53□□□□□ -0.4
UBR5-201ENST00000220959 A0A1B0GV90 55 aa12.52□□□□□ -0.4
UBR5-201ENST00000220959 C17orf100A8MU93 164 aa12.52□□□□□ -0.4
UBR5-201ENST00000220959 ZNF257Q9Y2Q1 563 aa12.52□□□□□ -0.4
UBR5-201ENST00000220959 SPRED2Q7Z698 418 aa12.52□□□□□ -0.4
UBR5-201ENST00000220959 COQ2Q96H96 371 aa12.52□□□□□ -0.41
UBR5-201ENST00000220959 ATAD5Q96QE3 1844 aa12.52□□□□□ -0.41
UBR5-201ENST00000220959 LINC00614P0C842 121 aa12.52□□□□□ -0.41
UBR5-201ENST00000220959 C11orf44Q8N8P7 122 aa12.52□□□□□ -0.41
UBR5-201ENST00000220959 CKS1BP61024 79 aa12.52□□□□□ -0.41
UBR5-201ENST00000220959 FUT5Q11128 374 aa12.52□□□□□ -0.41
UBR5-201ENST00000220959 DEFB121Q5J5C9 76 aa12.52□□□□□ -0.41
UBR5-201ENST00000220959 FAM216BQ8N7L0 139 aa12.52□□□□□ -0.41
UBR5-201ENST00000220959 MRPL20Q9BYC9 149 aaKnown RBP12.52□□□□□ -0.41
UBR5-201ENST00000220959 LILRA1O75019 489 aa12.51□□□□□ -0.41
UBR5-201ENST00000220959 SMIM10L1P0DMW3 83 aa12.51□□□□□ -0.41
UBR5-201ENST00000220959 SRSF6Q13247 344 aaKnown RBP12.51□□□□□ -0.41
UBR5-201ENST00000220959 C3orf36Q3SXR2 165 aa12.51□□□□□ -0.41
UBR5-201ENST00000220959 SMIM10Q96HG1 83 aa12.51□□□□□ -0.41
UBR5-201ENST00000220959 NPDC1Q9NQX5 325 aaPredicted RBP12.51□□□□□ -0.41
UBR5-201ENST00000220959 PSCAO43653 123 aa12.51□□□□□ -0.41
UBR5-201ENST00000220959 MESP2Q0VG99 397 aa12.51□□□□□ -0.41
UBR5-201ENST00000220959 TIAF1O95411 115 aa12.51□□□□□ -0.41
UBR5-201ENST00000220959 CST9LQ9H4G1 147 aa12.51□□□□□ -0.41
UBR5-201ENST00000220959 SHANK1Q9Y566 2161 aa12.51□□□□□ -0.41
UBR5-201ENST00000220959 LINC00312Q9Y6C7 94 aa12.51□□□□□ -0.41
UBR5-201ENST00000220959 NBR2O15453 112 aa12.51□□□□□ -0.41
UBR5-201ENST00000220959 TFF3Q07654 80 aa12.51□□□□□ -0.41
UBR5-201ENST00000220959 SPSB2Q99619 263 aa12.51□□□□□ -0.41
UBR5-201ENST00000220959 ARHGAP32A7KAX9 2087 aa12.51□□□□□ -0.41
UBR5-201ENST00000220959 C12orf77C9JDV5 145 aa12.51□□□□□ -0.41
UBR5-201ENST00000220959 TMEM14DPA8MWL7 114 aa12.51□□□□□ -0.41
UBR5-201ENST00000220959 SLC25A38Q96DW6 304 aa12.51□□□□□ -0.41
UBR5-201ENST00000220959 SLC50A1Q9BRV3 221 aa12.51□□□□□ -0.41
UBR5-201ENST00000220959 PRADC1Q9BSG0 188 aa12.51□□□□□ -0.41
UBR5-201ENST00000220959 WDYHV1Q96HA8 205 aa12.51□□□□□ -0.41
UBR5-201ENST00000220959 CHCHD5Q9BSY4 110 aa12.51□□□□□ -0.41
UBR5-201ENST00000220959 NIT1Q86X76 327 aa12.5□□□□□ -0.41
UBR5-201ENST00000220959 GDF15Q99988 308 aa12.5□□□□□ -0.41
UBR5-201ENST00000220959 IGHV2OR16-5A0A0B4J2B6 119 aa12.5□□□□□ -0.41
UBR5-201ENST00000220959 OTORQ9NRC9 128 aa12.5□□□□□ -0.41
UBR5-201ENST00000220959 SHANK3Q9BYB0 1731 aa12.5□□□□□ -0.41
UBR5-201ENST00000220959 GGTLC3B5MD39 225 aa12.5□□□□□ -0.41
UBR5-201ENST00000220959 GFI1BQ5VTD9 330 aa12.5□□□□□ -0.41
UBR5-201ENST00000220959 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.5□□□□□ -0.414e-7■■■■■ 36.1
UBR5-201ENST00000220959 ST6GALNAC6Q969X2 333 aa12.5□□□□□ -0.41
UBR5-201ENST00000220959 RFPL3SP0C7P2 107 aa12.5□□□□□ -0.41
UBR5-201ENST00000220959 TRAV2A0A0B4J234 112 aa12.5□□□□□ -0.41
UBR5-201ENST00000220959 NPIPB13A6NJU9 1138 aa12.5□□□□□ -0.41
UBR5-201ENST00000220959 LINC00158P58513 81 aa12.5□□□□□ -0.41
UBR5-201ENST00000220959 HIGD1CA8MV81 97 aa12.5□□□□□ -0.41
UBR5-201ENST00000220959 SRSF1Q07955 248 aaKnown RBP eCLIP12.5□□□□□ -0.411e-7■■□□□ 12.3
UBR5-201ENST00000220959 SLC25A2Q9BXI2 301 aa12.5□□□□□ -0.41
UBR5-201ENST00000220959 IGHV1-2P23083 117 aa12.49□□□□□ -0.41
UBR5-201ENST00000220959 WNK1Q9H4A3 2382 aa12.49□□□□□ -0.41
UBR5-201ENST00000220959 C17orf98A8MV24 154 aa12.49□□□□□ -0.41
UBR5-201ENST00000220959 CMC4P56277 68 aaPredicted RBP12.49□□□□□ -0.41
UBR5-201ENST00000220959 EGR4Q05215 589 aa12.49□□□□□ -0.41
UBR5-201ENST00000220959 IZUMO1RA6ND01 250 aa12.49□□□□□ -0.41
UBR5-201ENST00000220959 RCC1LQ96I51 464 aaKnown RBP12.49□□□□□ -0.41
UBR5-201ENST00000220959 PLNP26678 52 aa12.49□□□□□ -0.41
UBR5-201ENST00000220959 ZNF585BQ52M93 769 aa12.49□□□□□ -0.41
UBR5-201ENST00000220959 CD28P10747 220 aa12.49□□□□□ -0.41
UBR5-201ENST00000220959 ST6GALNAC3Q8NDV1 305 aa12.49□□□□□ -0.41
UBR5-201ENST00000220959 SPCS1Q9Y6A9 102 aa12.49□□□□□ -0.41
UBR5-201ENST00000220959 SRD5A1P18405 259 aa12.49□□□□□ -0.41
UBR5-201ENST00000220959 MIR17HGQ75NE6 70 aa12.48□□□□□ -0.41
UBR5-201ENST00000220959 IMMP2LQ96T52 175 aa12.48□□□□□ -0.41
UBR5-201ENST00000220959 IGKV1D-42A0A075B6H8 117 aa12.48□□□□□ -0.41
UBR5-201ENST00000220959 TRGV11A0A075B6L2 103 aa12.48□□□□□ -0.41
UBR5-201ENST00000220959 CTSBP07858 339 aa12.48□□□□□ -0.41
UBR5-201ENST00000220959 SEPSECSQ9HD40 501 aaKnown RBP12.48□□□□□ -0.41
UBR5-201ENST00000220959 A0A087WX48 190 aa12.48□□□□□ -0.41
UBR5-201ENST00000220959 FAM90A1Q86YD7 464 aa12.48□□□□□ -0.41
UBR5-201ENST00000220959 VKORC1Q9BQB6 163 aa12.48□□□□□ -0.41
UBR5-201ENST00000220959 ANAPC13Q9BS18 74 aa12.48□□□□□ -0.41
UBR5-201ENST00000220959 GLI3P10071 1580 aa12.48□□□□□ -0.41
UBR5-201ENST00000220959 CELA3AP09093 270 aa12.48□□□□□ -0.41
UBR5-201ENST00000220959 H2BFSP57053 126 aa12.48□□□□□ -0.41
UBR5-201ENST00000220959 PIN1P1O15428 100 aa12.48□□□□□ -0.41
UBR5-201ENST00000220959 NAPSAO96009 420 aa12.48□□□□□ -0.41
UBR5-201ENST00000220959 CYSLTR1Q9Y271 337 aa12.48□□□□□ -0.41
UBR5-201ENST00000220959 NHSL1Q5SYE7 1610 aa12.48□□□□□ -0.41
UBR5-201ENST00000220959 JPT2Q9H910 190 aa12.48□□□□□ -0.41
UBR5-201ENST00000220959 PSG7Q13046 419 aa12.48□□□□□ -0.41
UBR5-201ENST00000220959 ZNF708P17019 499 aa12.47□□□□□ -0.41
UBR5-201ENST00000220959 ATP5G3P48201 142 aa12.47□□□□□ -0.41
UBR5-201ENST00000220959 RHOGP84095 191 aa12.47□□□□□ -0.41
UBR5-201ENST00000220959 TM2D1Q9BX74 207 aa12.47□□□□□ -0.41
UBR5-201ENST00000220959 RGPD3A6NKT7 1758 aaPredicted RBP12.47□□□□□ -0.41
UBR5-201ENST00000220959 PRDM6Q9NQX0 595 aa12.47□□□□□ -0.41
UBR5-201ENST00000220959 IQCF6A8MYZ5 107 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms