RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 KIAA0040Q15053 153 aa12.41□□□□□ -0.42
SPTLC2-201ENST00000216484 TMEM92Q6UXU6 159 aa12.41□□□□□ -0.42
SPTLC2-201ENST00000216484 FBXL7Q9UJT9 491 aa12.41□□□□□ -0.42
SPTLC2-201ENST00000216484 A0A1B0GW15 77 aa12.41□□□□□ -0.42
SPTLC2-201ENST00000216484 OR9G1Q8NH87 305 aa12.41□□□□□ -0.42
SPTLC2-201ENST00000216484 ZNF479Q96JC4 524 aa12.41□□□□□ -0.42
SPTLC2-201ENST00000216484 DNAJC30Q96LL9 226 aa12.41□□□□□ -0.42
SPTLC2-201ENST00000216484 SELENOKQ9Y6D0 94 aa12.41□□□□□ -0.42
SPTLC2-201ENST00000216484 GLRXP35754 106 aa12.41□□□□□ -0.42
SPTLC2-201ENST00000216484 TMEM91Q6ZNR0 172 aa12.41□□□□□ -0.42
SPTLC2-201ENST00000216484 KLF12Q9Y4X4 402 aa12.41□□□□□ -0.42
SPTLC2-201ENST00000216484 FAM27BQ5VT28 67 aa12.41□□□□□ -0.42
SPTLC2-201ENST00000216484 OR52E5Q8NH55 327 aa12.41□□□□□ -0.42
SPTLC2-201ENST00000216484 GDF15Q99988 308 aa12.41□□□□□ -0.42
SPTLC2-201ENST00000216484 EGR4Q05215 589 aa12.41□□□□□ -0.42
SPTLC2-201ENST00000216484 CLPSL1A2RUU4 121 aa12.41□□□□□ -0.42
SPTLC2-201ENST00000216484 IL6RP08887 468 aaPredicted RBP12.41□□□□□ -0.42
SPTLC2-201ENST00000216484 ADMP35318 185 aa12.41□□□□□ -0.42
SPTLC2-201ENST00000216484 FAM214BQ7L5A3 538 aa12.41□□□□□ -0.42
SPTLC2-201ENST00000216484 OR10W1Q8NGF6 305 aa12.41□□□□□ -0.42
SPTLC2-201ENST00000216484 WBP1LQ9NX94 342 aa12.41□□□□□ -0.42
SPTLC2-201ENST00000216484 C9orf40Q8IXQ3 194 aa12.41□□□□□ -0.42
SPTLC2-201ENST00000216484 NRN1Q9NPD7 142 aa12.41□□□□□ -0.42
SPTLC2-201ENST00000216484 IGFBP2P18065 325 aa12.4□□□□□ -0.42
SPTLC2-201ENST00000216484 ARPC1AQ92747 370 aa12.4□□□□□ -0.42
SPTLC2-201ENST00000216484 NYNRINQ9P2P1 1898 aaKnown RBP12.4□□□□□ -0.42
SPTLC2-201ENST00000216484 PRR33A8MZF0 331 aa12.4□□□□□ -0.42
SPTLC2-201ENST00000216484 RPL39P5Q59GN2 51 aa12.4□□□□□ -0.42
SPTLC2-201ENST00000216484 RBM38Q9H0Z9 239 aaKnown RBP12.4□□□□□ -0.42
SPTLC2-201ENST00000216484 TMEM238C9JI98 176 aa12.4□□□□□ -0.42
SPTLC2-201ENST00000216484 RFLNBQ8N5W9 214 aa12.4□□□□□ -0.42
SPTLC2-201ENST00000216484 WFDC12Q8WWY7 111 aa12.4□□□□□ -0.42
SPTLC2-201ENST00000216484 AQP3Q92482 292 aa12.4□□□□□ -0.42
SPTLC2-201ENST00000216484 PRDM13Q9H4Q3 707 aa12.4□□□□□ -0.42
SPTLC2-201ENST00000216484 AHRRA9YTQ3 701 aa12.4□□□□□ -0.43
SPTLC2-201ENST00000216484 SERF1AO75920 110 aa12.4□□□□□ -0.43
SPTLC2-201ENST00000216484 CIARTQ8N365 385 aaPredicted RBP12.4□□□□□ -0.43
SPTLC2-201ENST00000216484 SFXN3Q9BWM7 321 aa12.4□□□□□ -0.43
SPTLC2-201ENST00000216484 IGLV3-16A0A075B6K0 115 aa12.39□□□□□ -0.43
SPTLC2-201ENST00000216484 PQLC2LA1A4F0 135 aa12.39□□□□□ -0.43
SPTLC2-201ENST00000216484 TFF3Q07654 80 aa12.39□□□□□ -0.43
SPTLC2-201ENST00000216484 C9orf153Q5TBE3 101 aa12.39□□□□□ -0.43
SPTLC2-201ENST00000216484 KLF14Q8TD94 323 aaPredicted RBP12.39□□□□□ -0.43
SPTLC2-201ENST00000216484 GATAD1Q8WUU5 269 aa12.39□□□□□ -0.43
SPTLC2-201ENST00000216484 LEPROTO15243 131 aa12.39□□□□□ -0.43
SPTLC2-201ENST00000216484 CCL1P22362 96 aa12.39□□□□□ -0.43
SPTLC2-201ENST00000216484 A0A087WX48 190 aa12.39□□□□□ -0.43
SPTLC2-201ENST00000216484 ZNRF1Q8ND25 227 aa12.39□□□□□ -0.43
SPTLC2-201ENST00000216484 ZPLD1Q8TCW7 415 aa12.39□□□□□ -0.43
SPTLC2-201ENST00000216484 RPP25Q9BUL9 199 aaKnown RBP12.39□□□□□ -0.43
SPTLC2-201ENST00000216484 EML5Q05BV3 1969 aa12.39□□□□□ -0.43
SPTLC2-201ENST00000216484 CD33P20138 364 aa12.39□□□□□ -0.43
SPTLC2-201ENST00000216484 DEFB104AQ8WTQ1 72 aa12.39□□□□□ -0.43
SPTLC2-201ENST00000216484 IGHV3-73A0A0B4J1V6 119 aa12.38□□□□□ -0.43
SPTLC2-201ENST00000216484 CD300EQ496F6 205 aaPredicted RBP12.38□□□□□ -0.43
SPTLC2-201ENST00000216484 A0A1W2PRS3 328 aa12.38□□□□□ -0.43
SPTLC2-201ENST00000216484 PTP4A3O75365 173 aa12.38□□□□□ -0.43
SPTLC2-201ENST00000216484 VDAC2P45880 294 aaPredicted RBP12.38□□□□□ -0.43
SPTLC2-201ENST00000216484 H2BFSP57053 126 aa12.38□□□□□ -0.43
SPTLC2-201ENST00000216484 ORMDL2Q53FV1 153 aa12.38□□□□□ -0.43
SPTLC2-201ENST00000216484 TRAV8-3A0A0A6YYJ7 113 aa12.38□□□□□ -0.43
SPTLC2-201ENST00000216484 LAGE3Q14657 143 aa12.38□□□□□ -0.43
SPTLC2-201ENST00000216484 VN1R4Q7Z5H5 301 aa12.38□□□□□ -0.43
SPTLC2-201ENST00000216484 PPP1R27Q86WC6 154 aa12.38□□□□□ -0.43
SPTLC2-201ENST00000216484 FBXL15Q9H469 300 aa12.38□□□□□ -0.43
SPTLC2-201ENST00000216484 JPT1Q9UK76 154 aa12.38□□□□□ -0.43
SPTLC2-201ENST00000216484 BRCA1P38398 1863 aaKnown RBP12.38□□□□□ -0.43
SPTLC2-201ENST00000216484 HS3ST3B1Q9Y662 390 aa12.38□□□□□ -0.43
SPTLC2-201ENST00000216484 SPAARA0A1B0GVQ0 90 aa12.38□□□□□ -0.43
SPTLC2-201ENST00000216484 A6NNC1 897 aa12.38□□□□□ -0.43
SPTLC2-201ENST00000216484 RCC1LQ96I51 464 aaKnown RBP12.38□□□□□ -0.43
SPTLC2-201ENST00000216484 RLFQ13129 1914 aa12.37□□□□□ -0.43
SPTLC2-201ENST00000216484 FHL5Q5TD97 284 aa12.37□□□□□ -0.43
SPTLC2-201ENST00000216484 PRADC1Q9BSG0 188 aa12.37□□□□□ -0.43
SPTLC2-201ENST00000216484 PLSCR4Q9NRQ2 329 aa12.37□□□□□ -0.43
SPTLC2-201ENST00000216484 SPINK8P0C7L1 97 aa12.37□□□□□ -0.43
SPTLC2-201ENST00000216484 PPIFP30405 207 aaKnown RBP12.37□□□□□ -0.43
SPTLC2-201ENST00000216484 PCOLCEQ15113 449 aa12.37□□□□□ -0.43
SPTLC2-201ENST00000216484 HMGCLL1Q8TB92 370 aa12.37□□□□□ -0.43
SPTLC2-201ENST00000216484 OVOL2Q9BRP0 275 aa12.37□□□□□ -0.43
SPTLC2-201ENST00000216484 FABP5P3A8MUU1 101 aa12.37□□□□□ -0.43
SPTLC2-201ENST00000216484 NRTNQ99748 197 aa12.37□□□□□ -0.43
SPTLC2-201ENST00000216484 ASCL2Q99929 193 aa12.37□□□□□ -0.43
SPTLC2-201ENST00000216484 USF3Q68DE3 2245 aa12.37□□□□□ -0.43
SPTLC2-201ENST00000216484 A8MXK9 166 aa12.37□□□□□ -0.43
SPTLC2-201ENST00000216484 OBSL1O75147 1896 aa12.37□□□□□ -0.43
SPTLC2-201ENST00000216484 FOXL1Q12952 345 aa12.36□□□□□ -0.43
SPTLC2-201ENST00000216484 DRAM1Q8N682 238 aa12.36□□□□□ -0.43
SPTLC2-201ENST00000216484 DLX4Q92988 240 aaPredicted RBP12.36□□□□□ -0.43
SPTLC2-201ENST00000216484 GP6Q9HCN6 339 aa12.36□□□□□ -0.43
SPTLC2-201ENST00000216484 C21orf62Q9NYP8 219 aa12.36□□□□□ -0.43
SPTLC2-201ENST00000216484 TRAV41A0A0B4J266 112 aa12.36□□□□□ -0.43
SPTLC2-201ENST00000216484 MYOD1P15172 320 aa12.36□□□□□ -0.43
SPTLC2-201ENST00000216484 TFF2Q03403 129 aa12.36□□□□□ -0.43
SPTLC2-201ENST00000216484 TMEM54Q969K7 222 aa12.36□□□□□ -0.43
SPTLC2-201ENST00000216484 ZNF729A6NN14 1252 aaPredicted RBP12.36□□□□□ -0.43
SPTLC2-201ENST00000216484 UCNP55089 124 aa12.36□□□□□ -0.43
SPTLC2-201ENST00000216484 C3orf36Q3SXR2 165 aa12.36□□□□□ -0.43
SPTLC2-201ENST00000216484 IGHV3-11P01762 117 aa12.36□□□□□ -0.43
SPTLC2-201ENST00000216484 ZP1P60852 638 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms