RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 LINC00322Q6ZN03 302 aaPredicted RBP11.32□□□□□ -0.6
UPK3A-201ENST00000216211 ZNF66Q6ZN08 573 aa11.32□□□□□ -0.6
UPK3A-201ENST00000216211 SECTM1Q8WVN6 248 aa11.32□□□□□ -0.6
UPK3A-201ENST00000216211 WDR89Q96FK6 387 aaPredicted RBP11.32□□□□□ -0.6
UPK3A-201ENST00000216211 FANCD2OSQ96PS1 177 aa11.32□□□□□ -0.6
UPK3A-201ENST00000216211 SLC5A7Q9GZV3 580 aa11.32□□□□□ -0.6
UPK3A-201ENST00000216211 WFDC10AQ9H1F0 79 aa11.32□□□□□ -0.6
UPK3A-201ENST00000216211 CCL28Q9NRJ3 127 aa11.32□□□□□ -0.6
UPK3A-201ENST00000216211 SLC2A9Q9NRM0 540 aa11.32□□□□□ -0.6
UPK3A-201ENST00000216211 SELENOKQ9Y6D0 94 aa11.32□□□□□ -0.6
UPK3A-201ENST00000216211 GPR31O00270 319 aa11.31□□□□□ -0.6
UPK3A-201ENST00000216211 HRASP01112 189 aa11.31□□□□□ -0.6
UPK3A-201ENST00000216211 REG1AP05451 166 aa11.31□□□□□ -0.6
UPK3A-201ENST00000216211 FOLR2P14207 255 aa11.31□□□□□ -0.6
UPK3A-201ENST00000216211 ARL3P36405 182 aa11.31□□□□□ -0.6
UPK3A-201ENST00000216211 TMEM187Q14656 261 aa11.31□□□□□ -0.6
UPK3A-201ENST00000216211 PLECQ15149 4684 aaKnown RBP11.31□□□□□ -0.6
UPK3A-201ENST00000216211 GUCA2BQ16661 112 aa11.31□□□□□ -0.6
UPK3A-201ENST00000216211 PHLDA2Q53GA4 152 aa11.31□□□□□ -0.6
UPK3A-201ENST00000216211 FAM209BQ5JX69 171 aa11.31□□□□□ -0.6
UPK3A-201ENST00000216211 CLEC19AQ6UXS0 136 aa11.31□□□□□ -0.6
UPK3A-201ENST00000216211 GSG1LQ6UXU4 331 aa11.31□□□□□ -0.6
UPK3A-201ENST00000216211 C9orf62Q8N4C0 152 aa11.31□□□□□ -0.6
UPK3A-201ENST00000216211 DEFB125Q8N687 156 aa11.31□□□□□ -0.6
UPK3A-201ENST00000216211 LRTM2Q8N967 370 aa11.31□□□□□ -0.6
UPK3A-201ENST00000216211 CCDC140Q96MF4 163 aa11.31□□□□□ -0.6
UPK3A-201ENST00000216211 FAM110AQ9BQ89 295 aa11.31□□□□□ -0.6
UPK3A-201ENST00000216211 CGB1A6NKQ9 187 aa11.3□□□□□ -0.6
UPK3A-201ENST00000216211 HMSDA8MTL9 139 aa11.3□□□□□ -0.6
UPK3A-201ENST00000216211 LGALS9O00182 355 aa11.3□□□□□ -0.6
UPK3A-201ENST00000216211 CRYGCP07315 174 aa11.3□□□□□ -0.6
UPK3A-201ENST00000216211 CTRB1P17538 263 aa11.3□□□□□ -0.6
UPK3A-201ENST00000216211 PSMB6P28072 239 aa11.3□□□□□ -0.6
UPK3A-201ENST00000216211 KIR2DS2P43631 304 aa11.3□□□□□ -0.6
UPK3A-201ENST00000216211 RPL8P62917 257 aaKnown RBP11.3□□□□□ -0.6
UPK3A-201ENST00000216211 CYCSP99999 105 aaKnown RBP11.3□□□□□ -0.6
UPK3A-201ENST00000216211 FGL1Q08830 312 aa11.3□□□□□ -0.6
UPK3A-201ENST00000216211 CTRB2Q6GPI1 263 aa11.3□□□□□ -0.6
UPK3A-201ENST00000216211 CACNG8Q8WXS5 425 aa11.3□□□□□ -0.6
UPK3A-201ENST00000216211 NMES1Q9C002 83 aa11.3□□□□□ -0.6
UPK3A-201ENST00000216211 HIPK2Q9H2X6 1198 aa11.3□□□□□ -0.6
UPK3A-201ENST00000216211 SRD5A3Q9H8P0 318 aa11.3□□□□□ -0.6
UPK3A-201ENST00000216211 RBMY1BA6NDE4 496 aaKnown RBP11.29□□□□□ -0.6
UPK3A-201ENST00000216211 RBMY1EA6NEQ0 496 aaKnown RBP11.29□□□□□ -0.6
UPK3A-201ENST00000216211 OR11H12B2RN74 326 aa11.29□□□□□ -0.6
UPK3A-201ENST00000216211 CCSO14618 274 aa11.29□□□□□ -0.6
UPK3A-201ENST00000216211 RBMY1DP0C7P1 496 aaKnown RBP11.29□□□□□ -0.6
UPK3A-201ENST00000216211 IFITM2Q01629 132 aa11.29□□□□□ -0.6
UPK3A-201ENST00000216211 OR4A47Q6IF82 309 aa11.29□□□□□ -0.6
UPK3A-201ENST00000216211 ZNF818PQ6ZRF7 136 aa11.29□□□□□ -0.6
UPK3A-201ENST00000216211 GPHB5Q86YW7 130 aa11.29□□□□□ -0.6
UPK3A-201ENST00000216211 SPAG16Q8N0X2 631 aa11.29□□□□□ -0.6
UPK3A-201ENST00000216211 EEF1AKMT3Q96AZ1 226 aa11.29□□□□□ -0.6
UPK3A-201ENST00000216211 PDCD10Q9BUL8 212 aa11.29□□□□□ -0.6
UPK3A-201ENST00000216211 ZC4H2Q9NQZ6 224 aa11.29□□□□□ -0.6
UPK3A-201ENST00000216211 BET1LQ9NYM9 111 aa11.29□□□□□ -0.6
UPK3A-201ENST00000216211 TECRQ9NZ01 308 aaKnown RBP11.29□□□□□ -0.6
UPK3A-201ENST00000216211 BOLA1Q9Y3E2 137 aa11.29□□□□□ -0.6
UPK3A-201ENST00000216211 ALMS1Q8TCU4 4167 aa11.28□□□□□ -0.6
UPK3A-201ENST00000216211 C3orf85A0A1B0GTC6 90 aa11.28□□□□□ -0.6
UPK3A-201ENST00000216211 C5orf51A6NDU8 294 aa11.28□□□□□ -0.6
UPK3A-201ENST00000216211 MFSD2BA6NFX1 497 aa11.28□□□□□ -0.6
UPK3A-201ENST00000216211 OR5AC1P0C628 307 aa11.28□□□□□ -0.6
UPK3A-201ENST00000216211 SLC25A4P12235 298 aa11.28□□□□□ -0.6
UPK3A-201ENST00000216211 DEFA4P12838 97 aa11.28□□□□□ -0.6
UPK3A-201ENST00000216211 HIST1H1BP16401 226 aaKnown RBP11.28□□□□□ -0.6
UPK3A-201ENST00000216211 CBLN1P23435 193 aa11.28□□□□□ -0.6
UPK3A-201ENST00000216211 S100GP29377 79 aa11.28□□□□□ -0.6
UPK3A-201ENST00000216211 MSMO1Q15800 293 aa11.28□□□□□ -0.6
UPK3A-201ENST00000216211 LGALSLQ3ZCW2 172 aaPredicted RBP11.28□□□□□ -0.6
UPK3A-201ENST00000216211 CMTM1Q8IZ96 169 aa11.28□□□□□ -0.6
UPK3A-201ENST00000216211 LGI3Q8N145 548 aa11.28□□□□□ -0.6
UPK3A-201ENST00000216211 OR4A5Q8NH83 315 aa11.28□□□□□ -0.6
UPK3A-201ENST00000216211 GLYATL2Q8WU03 294 aa11.28□□□□□ -0.6
UPK3A-201ENST00000216211 SEC22AQ96IW7 307 aa11.28□□□□□ -0.6
UPK3A-201ENST00000216211 C2orf50Q96LR7 162 aa11.28□□□□□ -0.6
UPK3A-201ENST00000216211 PRR13Q9NZ81 148 aa11.28□□□□□ -0.6
UPK3A-201ENST00000216211 COMMD9Q9P000 198 aa11.28□□□□□ -0.6
UPK3A-201ENST00000216211 HSPB11Q9Y547 144 aa11.28□□□□□ -0.6
UPK3A-201ENST00000216211 BIRC6Q9NR09 4857 aa11.27□□□□□ -0.6
UPK3A-201ENST00000216211 IGLV11-55A0A075B6I3 123 aa11.27□□□□□ -0.61
UPK3A-201ENST00000216211 TRAV14DV4A0A0A6YYC5 116 aa11.27□□□□□ -0.61
UPK3A-201ENST00000216211 TRAV3A0A0B4J244 114 aa11.27□□□□□ -0.61
UPK3A-201ENST00000216211 ZNF320A2RRD8 509 aa11.27□□□□□ -0.61
UPK3A-201ENST00000216211 TMEM213A2RRL7 107 aa11.27□□□□□ -0.61
UPK3A-201ENST00000216211 FAM25EA8MYX2 175 aa11.27□□□□□ -0.61
UPK3A-201ENST00000216211 RGS13O14921 159 aa11.27□□□□□ -0.61
UPK3A-201ENST00000216211 PGLYRP1O75594 196 aaPredicted RBP11.27□□□□□ -0.61
UPK3A-201ENST00000216211 ADAP1O75689 374 aa11.27□□□□□ -0.61
UPK3A-201ENST00000216211 B3GALNT1O75752 331 aa11.27□□□□□ -0.61
UPK3A-201ENST00000216211 OR2B8PP59922 312 aa11.27□□□□□ -0.61
UPK3A-201ENST00000216211 SRPXP78539 464 aa11.27□□□□□ -0.61
UPK3A-201ENST00000216211 KLK9Q2XQG4 91 aa11.27□□□□□ -0.61
UPK3A-201ENST00000216211 TBC1D26Q86UD7 250 aa11.27□□□□□ -0.61
UPK3A-201ENST00000216211 ZBTB34Q8NCN2 500 aa11.27□□□□□ -0.61
UPK3A-201ENST00000216211 MLXQ9UH92 298 aa11.27□□□□□ -0.61
UPK3A-201ENST00000216211 KLK9Q9UKQ9 250 aa11.27□□□□□ -0.61
UPK3A-201ENST00000216211 A8MWP6 167 aa11.26□□□□□ -0.61
UPK3A-201ENST00000216211 HPRT1P00492 218 aa11.26□□□□□ -0.61
UPK3A-201ENST00000216211 IFNA21P01568 189 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 165.2 ms