RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Rab4aP56371 218 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Prrc1Q3UPH1 443 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Arg1Q61176 323 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Adora3Q61618 319 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Zfp948Q6DFU8 667 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 ErasQ7TN89 227 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Atpaf1Q811I0 324 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 D1Ertd622eQ8VEB3 207 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Dda1Q9D9Z5 102 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Igh-VJ558P01758 117 aa11.36□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 GrnP28798 589 aaKnown RBP11.36□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Wfdc8Q4KUS1 273 aa11.36□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Gp49aQ61450 303 aa11.36□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Vmn1r225Q8R2A5 298 aa11.36□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Fgf16Q9ESL8 207 aa11.36□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 AhsgP29699 345 aa11.36□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 2210407C18RikQ6YI28 220 aa11.36□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Olfr1002Q8VFK2 318 aa11.36□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Stard4Q99JV5 224 aa11.36□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Mrpl18Q9CQL5 180 aa11.36□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Atp23Q9CWQ3 201 aa11.36□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Tcf20Q9EPQ8 1987 aa11.36□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Gm20877J3QPZ4 227 aa11.36□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 CebpbP28033 296 aa11.36□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 RbpjP31266 526 aa11.36□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 PmchP56942 165 aa11.36□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Fgf12P61329 243 aa11.36□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 ClcP97400 68 aa11.36□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Ubald1Q6P3B2 176 aa11.36□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Fam214bQ8BR27 538 aa11.36□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Olfr136Q8VG72 312 aa11.36□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Q91WE4 72 aa11.36□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 ManbalQ9D8X0 85 aa11.36□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Q9D9C7 252 aa11.36□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Rp1l1Q8CGM2 1859 aa11.36□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Igkv1-131A0A140T8M8 120 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Olfr555E9Q547 315 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Gm6665F6Y363 85 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Olfr1154L7MU57 310 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Cd8bP10300 213 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Hist1h1aP43275 213 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Vmn1r181Q0P547 304 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Exosc6Q8BTW3 273 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Neil3Q8K203 606 aaKnown RBP11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Flywch2Q9CQE9 139 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Arl13aQ9D416 372 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Wbp2nlQ9D529 359 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Vstm5Q9D806 199 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Olfr19Q9JHB2 309 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Igkv14-126A0A075B5K0 117 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Trbv5A0A0B4J1G9 113 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Gm37797A0A1D5RLC8 261 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Olfr251E9Q891 316 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Tnfsf12O54907 249 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Sftpa1P35242 248 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Prelid1Q8R107 217 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Olfr827Q8VEV5 322 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 MpiQ924M7 423 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Sval1Q9D2X6 151 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 StrapQ9Z1Z2 350 aaKnown RBP11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Gm19410A0A140LJC7 2098 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Cspg4Q8VHY0 2327 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Gm28285A0A087WQ54 102 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Trbv12-1A0A0B4J1H0 124 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Trbv29A0A0G2LB96 114 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Gm12355A2A4X6 163 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 CrygsO35486 178 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 P01657 111 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 MpzP27573 248 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Srsf3P84104 164 aaKnown RBP11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Ear1P97426 155 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Mcrip1Q3UGS4 97 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Q80VP5 184 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Olfr167Q8VGJ5 312 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Dok5Q91ZM9 306 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Plekha2Q9ERS5 425 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Slc25a4P48962 298 aaKnown RBP11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 PmelQ60696 626 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Slc22a27Q76M72 551 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Sys1Q78S06 156 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Olfr907Q7TRC7 310 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 9030612E09RikQ8CE20 140 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Prss45Q8K4I7 317 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Lysmd2Q9D7V2 215 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 PyyQ9EPS2 98 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Prss8Q9ESD1 342 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Rbfox1Q9JJ43 396 aa11.35□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Nxpe5E0CX47 564 aa11.34□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Kcnk3O35111 409 aa11.34□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Atf6bO35451 699 aa11.34□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 PpicP30412 212 aaKnown RBP11.34□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Slc45a2P58355 530 aa11.34□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Bcl2l2P70345 193 aa11.34□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 H3f3aP84244 136 aaKnown RBP11.34□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Zfp772Q3UQL6 416 aa11.34□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Zdhhc23Q5Y5T3 425 aa11.34□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Scgb2b24Q7M747 112 aa11.34□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Mpped1Q91ZG2 326 aa11.34□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Gm9920D3YVZ2 140 aa11.34□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 9130204L05RikG3UWB8 92 aa11.34□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 43.2 ms