RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 DEFA4P12838 97 aa13.75□□□□□ -0.21
PHGDH-230ENST00000641927 ZFP69Q49AA0 526 aa13.75□□□□□ -0.21
PHGDH-230ENST00000641927 ASPHD1Q5U4P2 390 aa13.75□□□□□ -0.21
PHGDH-230ENST00000641927 Q6ZSV7 163 aa13.75□□□□□ -0.21
PHGDH-230ENST00000641927 OR2C3Q8N628 320 aa13.75□□□□□ -0.21
PHGDH-230ENST00000641927 SLC24A4Q8NFF2 622 aa13.75□□□□□ -0.21
PHGDH-230ENST00000641927 SMIM8Q96KF7 97 aa13.75□□□□□ -0.21
PHGDH-230ENST00000641927 G3V3Q6 166 aa13.75□□□□□ -0.21
PHGDH-230ENST00000641927 LY86O95711 162 aa13.75□□□□□ -0.21
PHGDH-230ENST00000641927 PAX9P55771 341 aa13.75□□□□□ -0.21
PHGDH-230ENST00000641927 RPP30P78346 268 aaKnown RBP13.75□□□□□ -0.21
PHGDH-230ENST00000641927 C19orf35Q6ZS72 473 aa13.75□□□□□ -0.21
PHGDH-230ENST00000641927 U3KQ87 197 aa13.75□□□□□ -0.21
PHGDH-230ENST00000641927 HTR2BP41595 481 aa13.74□□□□□ -0.21
PHGDH-230ENST00000641927 TAS2R30P59541 319 aa13.74□□□□□ -0.21
PHGDH-230ENST00000641927 AKIRIN2Q53H80 203 aa13.74□□□□□ -0.21
PHGDH-230ENST00000641927 STPG2Q8N412 459 aa13.74□□□□□ -0.21
PHGDH-230ENST00000641927 TMEM68Q96MH6 324 aa13.74□□□□□ -0.21
PHGDH-230ENST00000641927 STRAPQ9Y3F4 350 aaKnown RBP13.74□□□□□ -0.21
PHGDH-230ENST00000641927 INS-IGF2F8WCM5 200 aa13.73□□□□□ -0.21
PHGDH-230ENST00000641927 TSC22D2O75157 780 aa13.73□□□□□ -0.21
PHGDH-230ENST00000641927 C1QBP02746 253 aa13.73□□□□□ -0.21
PHGDH-230ENST00000641927 NPY1RP25929 384 aa13.73□□□□□ -0.21
PHGDH-230ENST00000641927 SUB1P53999 127 aaKnown RBP eCLIP13.73□□□□□ -0.21
PHGDH-230ENST00000641927 ZNF546Q86UE3 836 aa13.73□□□□□ -0.21
PHGDH-230ENST00000641927 Q8N2B8 174 aa13.73□□□□□ -0.21
PHGDH-230ENST00000641927 TTC9CQ8N5M4 171 aa13.73□□□□□ -0.21
PHGDH-230ENST00000641927 P2RX4Q99571 388 aa13.73□□□□□ -0.21
PHGDH-230ENST00000641927 C11orf1Q9H5F2 150 aa13.73□□□□□ -0.21
PHGDH-230ENST00000641927 ZC4H2Q9NQZ6 224 aa13.73□□□□□ -0.21
PHGDH-230ENST00000641927 ZNF355PQ9NSJ1 428 aa13.73□□□□□ -0.21
PHGDH-230ENST00000641927 FAM24AA6NFZ4 105 aa13.72□□□□□ -0.21
PHGDH-230ENST00000641927 TSPAN9O75954 239 aa13.72□□□□□ -0.21
PHGDH-230ENST00000641927 PRH1P02810 166 aa13.72□□□□□ -0.21
PHGDH-230ENST00000641927 SLC25A4P12235 298 aa13.72□□□□□ -0.21
PHGDH-230ENST00000641927 CTRB1P17538 263 aa13.72□□□□□ -0.21
PHGDH-230ENST00000641927 P2RY1P47900 373 aa13.72□□□□□ -0.21
PHGDH-230ENST00000641927 CTRB2Q6GPI1 263 aa13.72□□□□□ -0.21
PHGDH-230ENST00000641927 OR4C12Q96R67 309 aa13.72□□□□□ -0.21
PHGDH-230ENST00000641927 WNT10AQ9GZT5 417 aa13.72□□□□□ -0.21
PHGDH-230ENST00000641927 LYRM2Q9NU23 88 aaPredicted RBP13.72□□□□□ -0.21
PHGDH-230ENST00000641927 NF1P21359 2839 aa13.72□□□□□ -0.21
PHGDH-230ENST00000641927 NPIPB5A8MRT5 1133 aa13.72□□□□□ -0.21
PHGDH-230ENST00000641927 ARPC5O15511 151 aa13.72□□□□□ -0.21
PHGDH-230ENST00000641927 FBXO24O75426 580 aa13.72□□□□□ -0.21
PHGDH-230ENST00000641927 IFNA4P05014 189 aa13.72□□□□□ -0.21
PHGDH-230ENST00000641927 OR8U8P0C7N1 319 aa13.72□□□□□ -0.21
PHGDH-230ENST00000641927 RNASE2P10153 161 aaKnown RBP13.72□□□□□ -0.21
PHGDH-230ENST00000641927 LYL1P12980 280 aa13.72□□□□□ -0.21
PHGDH-230ENST00000641927 NUP62P37198 522 aaPredicted RBP13.72□□□□□ -0.21
PHGDH-230ENST00000641927 CRIP2P52943 208 aaPredicted RBP13.72□□□□□ -0.21
PHGDH-230ENST00000641927 RAB11AP62491 216 aa13.72□□□□□ -0.21
PHGDH-230ENST00000641927 INO80EQ8NBZ0 244 aaPredicted RBP13.72□□□□□ -0.21
PHGDH-230ENST00000641927 FAM110DQ8TAY7 271 aaPredicted RBP13.72□□□□□ -0.21
PHGDH-230ENST00000641927 GON7Q9BXV9 100 aa13.72□□□□□ -0.21
PHGDH-230ENST00000641927 F11RQ9Y624 299 aaKnown RBP13.72□□□□□ -0.21
PHGDH-230ENST00000641927 C15orf62A8K5M9 175 aa13.71□□□□□ -0.21
PHGDH-230ENST00000641927 CRYGCP07315 174 aa13.71□□□□□ -0.21
PHGDH-230ENST00000641927 METTL15P1P0C7V9 234 aa13.71□□□□□ -0.21
PHGDH-230ENST00000641927 SLC25A24Q6NUK1 477 aa13.71□□□□□ -0.21
PHGDH-230ENST00000641927 ZNF329Q86UD4 541 aa13.71□□□□□ -0.21
PHGDH-230ENST00000641927 NOXA1Q86UR1 476 aa13.71□□□□□ -0.21
PHGDH-230ENST00000641927 OR11H4Q8NGC9 324 aa13.71□□□□□ -0.21
PHGDH-230ENST00000641927 OR1P1Q8NH06 330 aa13.71□□□□□ -0.21
PHGDH-230ENST00000641927 SERTAD4Q9NUC0 356 aa13.71□□□□□ -0.21
PHGDH-230ENST00000641927 CST7O76096 145 aa13.7□□□□□ -0.22
PHGDH-230ENST00000641927 RPL12P30050 165 aaKnown RBP13.7□□□□□ -0.22
PHGDH-230ENST00000641927 AP2S1P53680 142 aaPredicted RBP13.7□□□□□ -0.22
PHGDH-230ENST00000641927 BSXQ3C1V8 233 aa13.7□□□□□ -0.22
PHGDH-230ENST00000641927 C2orf83Q53S99 150 aa13.7□□□□□ -0.22
PHGDH-230ENST00000641927 OR8G2PQ6IF36 304 aa13.7□□□□□ -0.22
PHGDH-230ENST00000641927 CENPVQ7Z7K6 275 aaPredicted RBP13.7□□□□□ -0.22
PHGDH-230ENST00000641927 STX12Q86Y82 276 aa13.7□□□□□ -0.22
PHGDH-230ENST00000641927 ZNF114Q8NC26 417 aa13.7□□□□□ -0.22
PHGDH-230ENST00000641927 TMEM170AQ8WVE7 144 aa13.7□□□□□ -0.22
PHGDH-230ENST00000641927 MISP3Q96FF7 219 aa13.7□□□□□ -0.22
PHGDH-230ENST00000641927 SLC25A31Q9H0C2 315 aa13.7□□□□□ -0.22
PHGDH-230ENST00000641927 IGSF23A1L1A6 192 aa13.69□□□□□ -0.22
PHGDH-230ENST00000641927 CYB5BO43169 146 aa13.69□□□□□ -0.22
PHGDH-230ENST00000641927 SLC35B1P78383 322 aa13.69□□□□□ -0.22
PHGDH-230ENST00000641927 C19orf54Q5BKX5 351 aa13.69□□□□□ -0.22
PHGDH-230ENST00000641927 TMEM14EPQ6UXP3 125 aa13.69□□□□□ -0.22
PHGDH-230ENST00000641927 ETV3LQ6ZN32 361 aa13.69□□□□□ -0.22
PHGDH-230ENST00000641927 TMEM252Q8N6L7 170 aa13.69□□□□□ -0.22
PHGDH-230ENST00000641927 TMEM217Q8N7C4 229 aa13.69□□□□□ -0.22
PHGDH-230ENST00000641927 PINX1Q96BK5 328 aaKnown RBP13.69□□□□□ -0.22
PHGDH-230ENST00000641927 HYLS1Q96M11 299 aa13.69□□□□□ -0.22
PHGDH-230ENST00000641927 MS4A10Q96PG2 267 aa13.69□□□□□ -0.22
PHGDH-230ENST00000641927 ZNF580Q9UK33 172 aa13.69□□□□□ -0.22
PHGDH-230ENST00000641927 TNFSF18Q9UNG2 199 aa13.69□□□□□ -0.22
PHGDH-230ENST00000641927 PSMB11A5LHX3 300 aa13.69□□□□□ -0.22
PHGDH-230ENST00000641927 SOX15O60248 233 aa13.69□□□□□ -0.22
PHGDH-230ENST00000641927 HKR1P10072 659 aa13.69□□□□□ -0.22
PHGDH-230ENST00000641927 PPIFP30405 207 aaKnown RBP13.69□□□□□ -0.22
PHGDH-230ENST00000641927 MFAP2P55001 183 aa13.69□□□□□ -0.22
PHGDH-230ENST00000641927 ATP5IP56385 69 aaPredicted RBP13.69□□□□□ -0.22
PHGDH-230ENST00000641927 EWSR1Q01844 656 aaKnown RBP eCLIP13.69□□□□□ -0.22
PHGDH-230ENST00000641927 OR1L6Q8NGR2 347 aa13.69□□□□□ -0.22
PHGDH-230ENST00000641927 OR4F5Q8NH21 305 aa13.69□□□□□ -0.22
PHGDH-230ENST00000641927 C16orf95Q9H693 158 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms