RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 CDS2O95674 445 aa13.21□□□□□ -0.29
PHGDH-227ENST00000641811 LY86O95711 162 aa13.21□□□□□ -0.29
PHGDH-227ENST00000641811 ARL3P36405 182 aa13.21□□□□□ -0.29
PHGDH-227ENST00000641811 AP3S2P59780 193 aa13.21□□□□□ -0.29
PHGDH-227ENST00000641811 HSPE1P61604 102 aaKnown RBP13.21□□□□□ -0.29
PHGDH-227ENST00000641811 ZC4H2Q9NQZ6 224 aa13.21□□□□□ -0.29
PHGDH-227ENST00000641811 PRR13Q9NZ81 148 aa13.21□□□□□ -0.29
PHGDH-227ENST00000641811 F11RQ9Y624 299 aaKnown RBP13.21□□□□□ -0.29
PHGDH-227ENST00000641811 B3GALNT1O75752 331 aa13.2□□□□□ -0.3
PHGDH-227ENST00000641811 ATG12O94817 140 aa13.2□□□□□ -0.3
PHGDH-227ENST00000641811 SPNP16150 400 aa13.2□□□□□ -0.3
PHGDH-227ENST00000641811 AKR1C4P17516 323 aa13.2□□□□□ -0.3
PHGDH-227ENST00000641811 FAUP35544 74 aaKnown RBP13.2□□□□□ -0.3
PHGDH-227ENST00000641811 PRCDQ00LT1 54 aa13.2□□□□□ -0.3
PHGDH-227ENST00000641811 BAK1Q16611 211 aa13.2□□□□□ -0.3
PHGDH-227ENST00000641811 TATDN3Q17R31 274 aa13.2□□□□□ -0.3
PHGDH-227ENST00000641811 Q6ZRM9 215 aa13.2□□□□□ -0.3
PHGDH-227ENST00000641811 SELENOHQ8IZQ5 122 aaKnown RBP13.2□□□□□ -0.3
PHGDH-227ENST00000641811 RNASE11Q8TAA1 199 aaKnown RBP13.2□□□□□ -0.3
PHGDH-227ENST00000641811 ZNF502Q8TBZ5 544 aa13.2□□□□□ -0.3
PHGDH-227ENST00000641811 RRNAD1Q96FB5 475 aaKnown RBP13.2□□□□□ -0.3
PHGDH-227ENST00000641811 CXorf58Q96LI9 332 aa13.2□□□□□ -0.3
PHGDH-227ENST00000641811 TRBV7-1A0A0A6YYK4 115 aa13.19□□□□□ -0.3
PHGDH-227ENST00000641811 ST8SIA3O43173 380 aa13.19□□□□□ -0.3
PHGDH-227ENST00000641811 GGCTO75223 188 aaKnown RBP13.19□□□□□ -0.3
PHGDH-227ENST00000641811 CLEC3BP05452 202 aa13.19□□□□□ -0.3
PHGDH-227ENST00000641811 CSN3P07498 182 aa13.19□□□□□ -0.3
PHGDH-227ENST00000641811 DHODHQ02127 395 aa13.19□□□□□ -0.3
PHGDH-227ENST00000641811 TMEM268Q5VZI3 342 aa13.19□□□□□ -0.3
PHGDH-227ENST00000641811 ZNF57Q68EA5 555 aaPredicted RBP13.19□□□□□ -0.3
PHGDH-227ENST00000641811 SGPP2Q8IWX5 399 aa13.19□□□□□ -0.3
PHGDH-227ENST00000641811 OR2C3Q8N628 320 aa13.19□□□□□ -0.3
PHGDH-227ENST00000641811 SCGB3A2Q96PL1 93 aa13.19□□□□□ -0.3
PHGDH-227ENST00000641811 SDHCQ99643 169 aaPredicted RBP13.19□□□□□ -0.3
PHGDH-227ENST00000641811 THYN1Q9P016 225 aa13.19□□□□□ -0.3
PHGDH-227ENST00000641811 CYB5BO43169 146 aa13.18□□□□□ -0.3
PHGDH-227ENST00000641811 IGLV1-51P01701 117 aa13.18□□□□□ -0.3
PHGDH-227ENST00000641811 EDN2P20800 178 aa13.18□□□□□ -0.3
PHGDH-227ENST00000641811 GPR183P32249 361 aa13.18□□□□□ -0.3
PHGDH-227ENST00000641811 SUPT4H1P63272 117 aaKnown RBP13.18□□□□□ -0.3
PHGDH-227ENST00000641811 TMEM187Q14656 261 aa13.18□□□□□ -0.3
PHGDH-227ENST00000641811 FAM209BQ5JX69 171 aa13.18□□□□□ -0.3
PHGDH-227ENST00000641811 RBPMSQ93062 196 aaKnown RBP13.18□□□□□ -0.3
PHGDH-227ENST00000641811 IGHV3-35A0A0C4DH35 117 aa13.17□□□□□ -0.3
PHGDH-227ENST00000641811 K7EIM0 57 aa13.17□□□□□ -0.3
PHGDH-227ENST00000641811 IFNA17P01571 189 aa13.17□□□□□ -0.3
PHGDH-227ENST00000641811 ADAMTSL5Q6ZMM2 481 aa13.17□□□□□ -0.3
PHGDH-227ENST00000641811 TMED4Q7Z7H5 227 aa13.17□□□□□ -0.3
PHGDH-227ENST00000641811 SLC35G3Q8N808 338 aa13.17□□□□□ -0.3
PHGDH-227ENST00000641811 OR1P1Q8NH06 330 aa13.17□□□□□ -0.3
PHGDH-227ENST00000641811 VN1R17PQ8TDU5 208 aa13.17□□□□□ -0.3
PHGDH-227ENST00000641811 GPR146Q96CH1 333 aa13.17□□□□□ -0.3
PHGDH-227ENST00000641811 GALNT14Q96FL9 552 aa13.17□□□□□ -0.3
PHGDH-227ENST00000641811 PLEKHA3Q9HB20 300 aa13.17□□□□□ -0.3
PHGDH-227ENST00000641811 KCNIP3Q9Y2W7 256 aa13.17□□□□□ -0.3
PHGDH-227ENST00000641811 LSM4Q9Y4Z0 139 aaKnown RBP13.17□□□□□ -0.3
PHGDH-227ENST00000641811 TMEM56-RWDD3S4R434 201 aa13.17□□□□□ -0.3
PHGDH-227ENST00000641811 LINC00854A0A1B0GVQ3 168 aa13.16□□□□□ -0.3
PHGDH-227ENST00000641811 TRIQKQ629K1 86 aa13.16□□□□□ -0.3
PHGDH-227ENST00000641811 GPHB5Q86YW7 130 aa13.16□□□□□ -0.3
PHGDH-227ENST00000641811 SCARB1Q8WTV0 552 aa13.16□□□□□ -0.3
PHGDH-227ENST00000641811 MISP3Q96FF7 219 aa13.16□□□□□ -0.3
PHGDH-227ENST00000641811 PEMTQ9UBM1 199 aa13.16□□□□□ -0.3
PHGDH-227ENST00000641811 ZNF320A2RRD8 509 aa13.15□□□□□ -0.3
PHGDH-227ENST00000641811 OR2T8A6NH00 312 aa13.15□□□□□ -0.3
PHGDH-227ENST00000641811 GP9P14770 177 aa13.15□□□□□ -0.3
PHGDH-227ENST00000641811 INPP1P49441 399 aa13.15□□□□□ -0.3
PHGDH-227ENST00000641811 CCR6P51684 374 aa13.15□□□□□ -0.3
PHGDH-227ENST00000641811 ERHP84090 104 aaKnown RBP13.15□□□□□ -0.3
PHGDH-227ENST00000641811 FAM219AQ8IW50 185 aa13.15□□□□□ -0.3
PHGDH-227ENST00000641811 OR1L6Q8NGR2 347 aa13.15□□□□□ -0.3
PHGDH-227ENST00000641811 PDCD10Q9BUL8 212 aa13.15□□□□□ -0.3
PHGDH-227ENST00000641811 C21orf62Q9NYP8 219 aa13.15□□□□□ -0.3
PHGDH-227ENST00000641811 CACNG5Q9UF02 275 aa13.15□□□□□ -0.3
PHGDH-227ENST00000641811 SELENOKQ9Y6D0 94 aa13.15□□□□□ -0.3
PHGDH-227ENST00000641811 SORL1Q92673 2214 aa13.15□□□□□ -0.31
PHGDH-227ENST00000641811 IZUMO1RA6ND01 250 aa13.14□□□□□ -0.31
PHGDH-227ENST00000641811 C2orf70A6NJV1 201 aa13.14□□□□□ -0.31
PHGDH-227ENST00000641811 F8W735 103 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-227ENST00000641811 IGHV3-48P01763 117 aa13.14□□□□□ -0.31
PHGDH-227ENST00000641811 HOXA1P49639 335 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-227ENST00000641811 FAM106AQ4KMX7 169 aa13.14□□□□□ -0.31
PHGDH-227ENST00000641811 PLET1Q6UQ28 207 aa13.14□□□□□ -0.31
PHGDH-227ENST00000641811 LYZL2Q7Z4W2 148 aa13.14□□□□□ -0.31
PHGDH-227ENST00000641811 UBAC2Q8NBM4 344 aa13.14□□□□□ -0.31
PHGDH-227ENST00000641811 ZNF114Q8NC26 417 aa13.14□□□□□ -0.31
PHGDH-227ENST00000641811 DEDD2Q8WXF8 326 aa13.14□□□□□ -0.31
PHGDH-227ENST00000641811 CACNG8Q8WXS5 425 aa13.14□□□□□ -0.31
PHGDH-227ENST00000641811 CHRDL1Q9BU40 450 aa13.14□□□□□ -0.31
PHGDH-227ENST00000641811 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-227ENST00000641811 SIGLEC8Q9NYZ4 499 aa13.14□□□□□ -0.31
PHGDH-227ENST00000641811 I3L2K1 104 aa13.13□□□□□ -0.31
PHGDH-227ENST00000641811 LGALS9O00182 355 aa13.13□□□□□ -0.31
PHGDH-227ENST00000641811 TGOLN2O43493 480 aa13.13□□□□□ -0.31
PHGDH-227ENST00000641811 NXPH3O95157 252 aa13.13□□□□□ -0.31
PHGDH-227ENST00000641811 FOLR2P14207 255 aa13.13□□□□□ -0.31
PHGDH-227ENST00000641811 SNCAP37840 140 aa13.13□□□□□ -0.31
PHGDH-227ENST00000641811 AARDQ4LEZ3 155 aa13.13□□□□□ -0.31
PHGDH-227ENST00000641811 UNQ9165/PRO28630Q6UXU0 137 aa13.13□□□□□ -0.31
PHGDH-227ENST00000641811 IL22RA2Q969J5 263 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms