RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 SCAF4O95104 1147 aaKnown RBP10.45□□□□□ -0.74
PHGDH-221ENST00000641573 NDUFA3O95167 84 aa10.45□□□□□ -0.74
PHGDH-221ENST00000641573 AVPP01185 164 aa10.45□□□□□ -0.74
PHGDH-221ENST00000641573 FAM106CPP0CH98 169 aa10.45□□□□□ -0.74
PHGDH-221ENST00000641573 TMEM11P17152 192 aa10.45□□□□□ -0.74
PHGDH-221ENST00000641573 CHRNA7P36544 502 aa10.45□□□□□ -0.74
PHGDH-221ENST00000641573 RAB14P61106 215 aa10.45□□□□□ -0.74
PHGDH-221ENST00000641573 SRSF2Q01130 221 aaKnown RBP10.45□□□□□ -0.74
PHGDH-221ENST00000641573 TNXAQ16473 311 aa10.45□□□□□ -0.74
PHGDH-221ENST00000641573 ATP6V1FQ16864 119 aa10.45□□□□□ -0.74
PHGDH-221ENST00000641573 KLF17Q5JT82 389 aaPredicted RBP10.45□□□□□ -0.74
PHGDH-221ENST00000641573 FAM74A1Q5RGS3 127 aa10.45□□□□□ -0.74
PHGDH-221ENST00000641573 ETV3LQ6ZN32 361 aa10.45□□□□□ -0.74
PHGDH-221ENST00000641573 LILRB2Q8N423 598 aa10.45□□□□□ -0.74
PHGDH-221ENST00000641573 SLC24A4Q8NFF2 622 aa10.45□□□□□ -0.74
PHGDH-221ENST00000641573 OR10P1Q8NGE3 313 aa10.45□□□□□ -0.74
PHGDH-221ENST00000641573 OR10W1Q8NGF6 305 aa10.45□□□□□ -0.74
PHGDH-221ENST00000641573 TMEM170AQ8WVE7 144 aa10.45□□□□□ -0.74
PHGDH-221ENST00000641573 PCNPQ8WW12 178 aaKnown RBP10.45□□□□□ -0.74
PHGDH-221ENST00000641573 TMED6Q8WW62 240 aa10.45□□□□□ -0.74
PHGDH-221ENST00000641573 A0A0U1RQK1 487 aa10.44□□□□□ -0.74
PHGDH-221ENST00000641573 A0A1B0GW64 132 aa10.44□□□□□ -0.74
PHGDH-221ENST00000641573 RPS10-NUDT3A0A1W2PQS6 291 aa10.44□□□□□ -0.74
PHGDH-221ENST00000641573 INS-IGF2F8WCM5 200 aa10.44□□□□□ -0.74
PHGDH-221ENST00000641573 FCN1O00602 326 aa10.44□□□□□ -0.74
PHGDH-221ENST00000641573 FBXO24O75426 580 aa10.44□□□□□ -0.74
PHGDH-221ENST00000641573 CA2P00918 260 aa10.44□□□□□ -0.74
PHGDH-221ENST00000641573 IFNA5P01569 189 aa10.44□□□□□ -0.74
PHGDH-221ENST00000641573 NPY1RP25929 384 aa10.44□□□□□ -0.74
PHGDH-221ENST00000641573 RPL27AP46776 148 aaKnown RBP10.44□□□□□ -0.74
PHGDH-221ENST00000641573 COMPP49747 757 aaPredicted RBP10.44□□□□□ -0.74
PHGDH-221ENST00000641573 RAB11AP62491 216 aa10.44□□□□□ -0.74
PHGDH-221ENST00000641573 GNB1P62873 340 aa10.44□□□□□ -0.74
PHGDH-221ENST00000641573 ERHP84090 104 aaKnown RBP10.44□□□□□ -0.74
PHGDH-221ENST00000641573 CLLU1Q5K131 121 aa10.44□□□□□ -0.74
PHGDH-221ENST00000641573 EIF5AL1Q6IS14 154 aaKnown RBP10.44□□□□□ -0.74
PHGDH-221ENST00000641573 HSD17B11Q8NBQ5 300 aa10.44□□□□□ -0.74
PHGDH-221ENST00000641573 PINX1Q96BK5 328 aaKnown RBP10.44□□□□□ -0.74
PHGDH-221ENST00000641573 SLC25A32Q9H2D1 315 aa10.44□□□□□ -0.74
PHGDH-221ENST00000641573 IFNA4P05014 189 aa10.43□□□□□ -0.74
PHGDH-221ENST00000641573 ATP5IP56385 69 aaPredicted RBP10.43□□□□□ -0.74
PHGDH-221ENST00000641573 NDUFA5Q16718 116 aa10.43□□□□□ -0.74
PHGDH-221ENST00000641573 C5orf64Q2M2E5 130 aa10.43□□□□□ -0.74
PHGDH-221ENST00000641573 CYB5R2Q6BCY4 276 aa10.43□□□□□ -0.74
PHGDH-221ENST00000641573 SLC25A24Q6NUK1 477 aa10.43□□□□□ -0.74
PHGDH-221ENST00000641573 SCGB1C1Q8TD33 95 aa10.43□□□□□ -0.74
PHGDH-221ENST00000641573 TMEM147Q9BVK8 224 aa10.43□□□□□ -0.74
PHGDH-221ENST00000641573 MEGF9Q9H1U4 602 aa10.43□□□□□ -0.74
PHGDH-221ENST00000641573 FAM96BQ9Y3D0 163 aa10.43□□□□□ -0.74
PHGDH-221ENST00000641573 SOX21Q9Y651 276 aaPredicted RBP10.43□□□□□ -0.74
PHGDH-221ENST00000641573 TET2Q6N021 2002 aaPredicted RBP10.43□□□□□ -0.74
PHGDH-221ENST00000641573 NCBP2LA6PVI3 153 aaKnown RBP10.42□□□□□ -0.74
PHGDH-221ENST00000641573 NMBP08949 121 aa10.42□□□□□ -0.74
PHGDH-221ENST00000641573 SEC11BP0C7V7 166 aa10.42□□□□□ -0.74
PHGDH-221ENST00000641573 OR13C7P0DN81 318 aa10.42□□□□□ -0.74
PHGDH-221ENST00000641573 RNASE2P10153 161 aaKnown RBP10.42□□□□□ -0.74
PHGDH-221ENST00000641573 SPP1P10451 314 aa10.42□□□□□ -0.74
PHGDH-221ENST00000641573 HNF1AP20823 631 aa10.42□□□□□ -0.74
PHGDH-221ENST00000641573 ATP6V0CP27449 155 aa10.42□□□□□ -0.74
PHGDH-221ENST00000641573 SNCAP37840 140 aa10.42□□□□□ -0.74
PHGDH-221ENST00000641573 SSBP2P81877 361 aaPredicted RBP10.42□□□□□ -0.74
PHGDH-221ENST00000641573 WT1-ASQ06250 92 aa10.42□□□□□ -0.74
PHGDH-221ENST00000641573 BSXQ3C1V8 233 aa10.42□□□□□ -0.74
PHGDH-221ENST00000641573 C2orf83Q53S99 150 aa10.42□□□□□ -0.74
PHGDH-221ENST00000641573 C12orf54Q6X4T0 127 aa10.42□□□□□ -0.74
PHGDH-221ENST00000641573 MRPL41Q8IXM3 137 aaKnown RBP10.42□□□□□ -0.74
PHGDH-221ENST00000641573 SH3BGRL3Q9H299 93 aa10.42□□□□□ -0.74
PHGDH-221ENST00000641573 UQCC1Q9NVA1 299 aa10.42□□□□□ -0.74
PHGDH-221ENST00000641573 PLA2G2EQ9NZK7 142 aa10.42□□□□□ -0.74
PHGDH-221ENST00000641573 C1RLQ9NZP8 487 aa10.42□□□□□ -0.74
PHGDH-221ENST00000641573 WNK2Q9Y3S1 2297 aa10.41□□□□□ -0.74
PHGDH-221ENST00000641573 UBE2L5PA0A1B0GUS4 154 aa10.41□□□□□ -0.74
PHGDH-221ENST00000641573 PRSS46E5RG02 174 aa10.41□□□□□ -0.74
PHGDH-221ENST00000641573 CNIH1O95406 144 aa10.41□□□□□ -0.74
PHGDH-221ENST00000641573 DLK1P80370 383 aa10.41□□□□□ -0.74
PHGDH-221ENST00000641573 VWC2Q2TAL6 325 aa10.41□□□□□ -0.74
PHGDH-221ENST00000641573 TUSC1Q2TAM9 212 aa10.41□□□□□ -0.74
PHGDH-221ENST00000641573 LRRC75BQ2VPJ9 315 aa10.41□□□□□ -0.74
PHGDH-221ENST00000641573 SLC7A5P1Q8MH63 180 aa10.41□□□□□ -0.74
PHGDH-221ENST00000641573 SRSF12Q8WXF0 261 aaKnown RBP10.41□□□□□ -0.74
PHGDH-221ENST00000641573 GNPNAT1Q96EK6 184 aaPredicted RBP10.41□□□□□ -0.74
PHGDH-221ENST00000641573 GGACTQ9BVM4 153 aa10.41□□□□□ -0.74
PHGDH-221ENST00000641573 PARD6GQ9BYG4 376 aaPredicted RBP10.41□□□□□ -0.74
PHGDH-221ENST00000641573 WDR61Q9GZS3 305 aaKnown RBP10.41□□□□□ -0.74
PHGDH-221ENST00000641573 IGLC7A0M8Q6 106 aa10.4□□□□□ -0.74
PHGDH-221ENST00000641573 TEX22C9J3V5 150 aa10.4□□□□□ -0.74
PHGDH-221ENST00000641573 FGF16O43320 207 aa10.4□□□□□ -0.74
PHGDH-221ENST00000641573 FBP1P09467 338 aa10.4□□□□□ -0.74
PHGDH-221ENST00000641573 SULT1A2P50226 295 aa10.4□□□□□ -0.74
PHGDH-221ENST00000641573 SUB1P53999 127 aaKnown RBP eCLIP10.4□□□□□ -0.74
PHGDH-221ENST00000641573 BPIFB3P59826 476 aa10.4□□□□□ -0.74
PHGDH-221ENST00000641573 RUNX1Q01196 453 aa10.4□□□□□ -0.74
PHGDH-221ENST00000641573 FXYD3Q14802 87 aa10.4□□□□□ -0.74
PHGDH-221ENST00000641573 Q8N9W7 124 aa10.4□□□□□ -0.74
PHGDH-221ENST00000641573 OR2G3Q8NGZ4 309 aa10.4□□□□□ -0.74
PHGDH-221ENST00000641573 LRRC20Q8TCA0 184 aa10.4□□□□□ -0.74
PHGDH-221ENST00000641573 RNF141Q8WVD5 230 aa10.4□□□□□ -0.74
PHGDH-221ENST00000641573 RFNGQ9Y644 331 aa10.4□□□□□ -0.74
PHGDH-221ENST00000641573 LINC00862A6NCI5 91 aa10.39□□□□□ -0.75
PHGDH-221ENST00000641573 REG1AP05451 166 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms