RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 CHRNA7P36544 502 aa13.24□□□□□ -0.29
PHGDH-216ENST00000641375 ATP5J2P56134 94 aa13.24□□□□□ -0.29
PHGDH-216ENST00000641375 ZNF709Q8N972 641 aa13.24□□□□□ -0.29
PHGDH-216ENST00000641375 C14orf144Q96I85 54 aa13.24□□□□□ -0.29
PHGDH-216ENST00000641375 SIRPDQ9H106 197 aa13.24□□□□□ -0.29
PHGDH-216ENST00000641375 ZNF430Q9H8G1 570 aaPredicted RBP13.24□□□□□ -0.29
PHGDH-216ENST00000641375 AGPAT2O15120 278 aa13.24□□□□□ -0.29
PHGDH-216ENST00000641375 ERHP84090 104 aaKnown RBP13.24□□□□□ -0.29
PHGDH-216ENST00000641375 KLRD1Q13241 179 aa13.24□□□□□ -0.29
PHGDH-216ENST00000641375 SP5Q6BEB4 398 aaPredicted RBP13.24□□□□□ -0.29
PHGDH-216ENST00000641375 CLEC2AQ6UVW9 174 aa13.24□□□□□ -0.29
PHGDH-216ENST00000641375 RITA1Q96K30 269 aa13.24□□□□□ -0.29
PHGDH-216ENST00000641375 NPCDR1Q9BY65 106 aa13.24□□□□□ -0.29
PHGDH-216ENST00000641375 DVL1P1P54792 670 aaPredicted RBP13.23□□□□□ -0.29
PHGDH-216ENST00000641375 LBHQ53QV2 105 aaPredicted RBP13.23□□□□□ -0.29
PHGDH-216ENST00000641375 C2orf83Q53S99 150 aa13.23□□□□□ -0.29
PHGDH-216ENST00000641375 TMEM41BQ5BJD5 291 aa13.23□□□□□ -0.29
PHGDH-216ENST00000641375 DNLZQ5SXM8 178 aa13.23□□□□□ -0.29
PHGDH-216ENST00000641375 MINOS1Q5TGZ0 78 aa13.23□□□□□ -0.29
PHGDH-216ENST00000641375 CCDC144NLQ6NUI1 221 aa13.23□□□□□ -0.29
PHGDH-216ENST00000641375 MMD2Q8IY49 270 aa13.23□□□□□ -0.29
PHGDH-216ENST00000641375 C10orf105Q8TEF2 133 aa13.23□□□□□ -0.29
PHGDH-216ENST00000641375 MALSU1Q96EH3 234 aa13.23□□□□□ -0.29
PHGDH-216ENST00000641375 WDR83OSQ9Y284 106 aa13.23□□□□□ -0.29
PHGDH-216ENST00000641375 POLR3KQ9Y2Y1 108 aaPredicted RBP13.23□□□□□ -0.29
PHGDH-216ENST00000641375 MINOS1-NBL1R4GNA1 71 aa13.23□□□□□ -0.29
PHGDH-216ENST00000641375 TIMM23O14925 209 aa13.22□□□□□ -0.29
PHGDH-216ENST00000641375 SOX15O60248 233 aa13.22□□□□□ -0.29
PHGDH-216ENST00000641375 TOX4O94842 621 aa13.22□□□□□ -0.29
PHGDH-216ENST00000641375 HBE1P02100 147 aa13.22□□□□□ -0.29
PHGDH-216ENST00000641375 MBP02144 154 aa13.22□□□□□ -0.29
PHGDH-216ENST00000641375 HOXB4P17483 251 aaPredicted RBP13.22□□□□□ -0.29
PHGDH-216ENST00000641375 SSX2Q16385 188 aa13.22□□□□□ -0.29
PHGDH-216ENST00000641375 BSXQ3C1V8 233 aa13.22□□□□□ -0.29
PHGDH-216ENST00000641375 LDLRAD2Q5SZI1 272 aa13.22□□□□□ -0.29
PHGDH-216ENST00000641375 REC114Q7Z4M0 266 aa13.22□□□□□ -0.29
PHGDH-216ENST00000641375 PBDC1Q9BVG4 233 aa13.22□□□□□ -0.29
PHGDH-216ENST00000641375 ASH1LQ9NR48 2969 aaKnown RBP13.22□□□□□ -0.29
PHGDH-216ENST00000641375 RPRMQ9NS64 109 aa13.22□□□□□ -0.29
PHGDH-216ENST00000641375 SMCO3A2RU48 225 aa13.22□□□□□ -0.29
PHGDH-216ENST00000641375 OOSP1A8MZH6 123 aa13.22□□□□□ -0.29
PHGDH-216ENST00000641375 FNDC10F2Z333 226 aa13.22□□□□□ -0.29
PHGDH-216ENST00000641375 MAS1LP35410 378 aa13.22□□□□□ -0.29
PHGDH-216ENST00000641375 LGALS4P56470 323 aa13.22□□□□□ -0.29
PHGDH-216ENST00000641375 PSG5Q15238 335 aa13.22□□□□□ -0.29
PHGDH-216ENST00000641375 MRPL41Q8IXM3 137 aaKnown RBP13.22□□□□□ -0.29
PHGDH-216ENST00000641375 ARL6IP6Q8N6S5 226 aa13.22□□□□□ -0.29
PHGDH-216ENST00000641375 NPVFQ9HCQ7 196 aa13.22□□□□□ -0.29
PHGDH-216ENST00000641375 HILPDAQ9Y5L2 63 aa13.22□□□□□ -0.29
PHGDH-216ENST00000641375 WNK2Q9Y3S1 2297 aa13.22□□□□□ -0.29
PHGDH-216ENST00000641375 RNASEK-C17orf49H0YIS7 233 aa13.21□□□□□ -0.29
PHGDH-216ENST00000641375 ACTL6BO94805 426 aa13.21□□□□□ -0.29
PHGDH-216ENST00000641375 CD5P06127 495 aa13.21□□□□□ -0.29
PHGDH-216ENST00000641375 CRYGBP07316 175 aa13.21□□□□□ -0.29
PHGDH-216ENST00000641375 SIGLEC9Q9Y336 463 aa13.21□□□□□ -0.29
PHGDH-216ENST00000641375 TRAV1-1A0A0B4J248 108 aa13.21□□□□□ -0.3
PHGDH-216ENST00000641375 VWC2LB2RUY7 222 aa13.21□□□□□ -0.3
PHGDH-216ENST00000641375 PRSS8Q16651 343 aa13.21□□□□□ -0.3
PHGDH-216ENST00000641375 TREML4Q6UXN2 200 aa13.21□□□□□ -0.3
PHGDH-216ENST00000641375 LHFPL4Q7Z7J7 247 aa13.21□□□□□ -0.3
PHGDH-216ENST00000641375 PPP1R27Q86WC6 154 aa13.21□□□□□ -0.3
PHGDH-216ENST00000641375 OR10W1Q8NGF6 305 aa13.21□□□□□ -0.3
PHGDH-216ENST00000641375 TPSG1Q9NRR2 321 aa13.21□□□□□ -0.3
PHGDH-216ENST00000641375 LRRK2Q5S007 2527 aa13.2□□□□□ -0.3
PHGDH-216ENST00000641375 UTP20O75691 2785 aaKnown RBP13.2□□□□□ -0.3
PHGDH-216ENST00000641375 VENTXO95231 258 aa13.2□□□□□ -0.3
PHGDH-216ENST00000641375 PAX1P15863 534 aa13.2□□□□□ -0.3
PHGDH-216ENST00000641375 ELLP55199 621 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-216ENST00000641375 GUK1Q16774 197 aa13.2□□□□□ -0.3
PHGDH-216ENST00000641375 SPSB3Q6PJ21 355 aa13.2□□□□□ -0.3
PHGDH-216ENST00000641375 TMEM231Q9H6L2 316 aa13.2□□□□□ -0.3
PHGDH-216ENST00000641375 VSIRQ9H7M9 311 aa13.2□□□□□ -0.3
PHGDH-216ENST00000641375 FAM96BQ9Y3D0 163 aa13.2□□□□□ -0.3
PHGDH-216ENST00000641375 TBL2Q9Y4P3 447 aaKnown RBP13.2□□□□□ -0.3
PHGDH-216ENST00000641375 FAM208BQ5VWN6 2430 aa13.2□□□□□ -0.3
PHGDH-216ENST00000641375 E7EUB6 86 aa13.2□□□□□ -0.3
PHGDH-216ENST00000641375 RNASE2P10153 161 aaKnown RBP13.2□□□□□ -0.3
PHGDH-216ENST00000641375 CNTFRP26992 372 aa13.2□□□□□ -0.3
PHGDH-216ENST00000641375 UBE2E1P51965 193 aa13.2□□□□□ -0.3
PHGDH-216ENST00000641375 SUB1P53999 127 aaKnown RBP eCLIP13.2□□□□□ -0.3
PHGDH-216ENST00000641375 DSCR9P59020 149 aa13.2□□□□□ -0.3
PHGDH-216ENST00000641375 HNF4GQ14541 408 aa13.2□□□□□ -0.3
PHGDH-216ENST00000641375 MRGPRG-AS1Q2M3A8 158 aa13.2□□□□□ -0.3
PHGDH-216ENST00000641375 CFHR4Q92496 578 aa13.2□□□□□ -0.3
PHGDH-216ENST00000641375 EIF5A2Q9GZV4 153 aaKnown RBP13.2□□□□□ -0.3
PHGDH-216ENST00000641375 KIAA1456Q9P272 454 aa13.2□□□□□ -0.3
PHGDH-216ENST00000641375 A0A1B0GW64 132 aa13.19□□□□□ -0.3
PHGDH-216ENST00000641375 A1L4Q6 167 aa13.19□□□□□ -0.3
PHGDH-216ENST00000641375 CRYBG3Q68DQ2 2970 aa13.19□□□□□ -0.3
PHGDH-216ENST00000641375 C1QL4Q86Z23 238 aa13.19□□□□□ -0.3
PHGDH-216ENST00000641375 MBD3L1Q8WWY6 194 aa13.19□□□□□ -0.3
PHGDH-216ENST00000641375 NEU1Q99519 415 aa13.19□□□□□ -0.3
PHGDH-216ENST00000641375 C2orf88Q9BSF0 95 aa13.19□□□□□ -0.3
PHGDH-216ENST00000641375 SMDT1Q9H4I9 107 aa13.19□□□□□ -0.3
PHGDH-216ENST00000641375 KCNIP2Q9NS61 270 aa13.19□□□□□ -0.3
PHGDH-216ENST00000641375 A0A1B0GV50 99 aa13.18□□□□□ -0.3
PHGDH-216ENST00000641375 MOSP00540 346 aa13.18□□□□□ -0.3
PHGDH-216ENST00000641375 SFTA3P0C7M3 94 aa13.18□□□□□ -0.3
PHGDH-216ENST00000641375 RAB5AP20339 215 aa13.18□□□□□ -0.3
PHGDH-216ENST00000641375 CD81P60033 236 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms