RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 M0R143 59 aa14.64□□□□□ -0.07
SCARB2-223ENST00000640640 DIRC3C9JPN6 131 aa14.63□□□□□ -0.07
SCARB2-223ENST00000640640 LYNX1G3V0Z9 82 aa14.63□□□□□ -0.07
SCARB2-223ENST00000640640 ACAA1P09110 424 aaPredicted RBP14.63□□□□□ -0.07
SCARB2-223ENST00000640640 LYNX1P0DP58 116 aa14.63□□□□□ -0.07
SCARB2-223ENST00000640640 ATP5G3P48201 142 aa14.63□□□□□ -0.07
SCARB2-223ENST00000640640 IGKV1D-33P01593 117 aa14.63□□□□□ -0.07
SCARB2-223ENST00000640640 IGKV1-33P01594 117 aa14.63□□□□□ -0.07
SCARB2-223ENST00000640640 CDX1P47902 265 aaPredicted RBP14.63□□□□□ -0.07
SCARB2-223ENST00000640640 PKIAP61925 76 aa14.63□□□□□ -0.07
SCARB2-223ENST00000640640 LY6EQ16553 131 aa14.63□□□□□ -0.07
SCARB2-223ENST00000640640 KIAA1644Q3SXP7 199 aa14.63□□□□□ -0.07
SCARB2-223ENST00000640640 GOLT1AQ6ZVE7 132 aa14.63□□□□□ -0.07
SCARB2-223ENST00000640640 CYTL1Q9NRR1 136 aa14.63□□□□□ -0.07
SCARB2-223ENST00000640640 TCAPO15273 167 aa14.62□□□□□ -0.07
SCARB2-223ENST00000640640 G0S2P27469 103 aa14.62□□□□□ -0.07
SCARB2-223ENST00000640640 LCN2P80188 198 aa14.62□□□□□ -0.07
SCARB2-223ENST00000640640 NMSQ5H8A3 153 aa14.62□□□□□ -0.07
SCARB2-223ENST00000640640 FAM208BQ5VWN6 2430 aa14.62□□□□□ -0.07
SCARB2-223ENST00000640640 IGHV3OR16-10A0A075B7F0 116 aa14.62□□□□□ -0.07
SCARB2-223ENST00000640640 A0A1W2PS18 150 aa14.62□□□□□ -0.07
SCARB2-223ENST00000640640 MBD3L4A6NDZ8 208 aaPredicted RBP14.62□□□□□ -0.07
SCARB2-223ENST00000640640 MBD3L3A6NE82 208 aaPredicted RBP14.62□□□□□ -0.07
SCARB2-223ENST00000640640 MBD3L5A6NJ08 208 aaPredicted RBP14.62□□□□□ -0.07
SCARB2-223ENST00000640640 GPX4P36969 197 aaPredicted RBP14.62□□□□□ -0.07
SCARB2-223ENST00000640640 ASCL4Q6XD76 172 aa14.62□□□□□ -0.07
SCARB2-223ENST00000640640 MBD3L2Q8NHZ7 208 aaPredicted RBP14.62□□□□□ -0.07
SCARB2-223ENST00000640640 CHODLQ9H9P2 273 aa14.62□□□□□ -0.07
SCARB2-223ENST00000640640 Q6ZS92 163 aa14.62□□□□□ -0.07
SCARB2-223ENST00000640640 RPUSD1Q9UJJ7 312 aaKnown RBP14.62□□□□□ -0.07
SCARB2-223ENST00000640640 HSPB8Q9UJY1 196 aa14.62□□□□□ -0.07
SCARB2-223ENST00000640640 CGB1A6NKQ9 187 aa14.61□□□□□ -0.07
SCARB2-223ENST00000640640 OR9G9P0C7N8 305 aa14.61□□□□□ -0.07
SCARB2-223ENST00000640640 ID1P41134 155 aa14.61□□□□□ -0.07
SCARB2-223ENST00000640640 RNASEH2CQ8TDP1 164 aaKnown RBP14.61□□□□□ -0.07
SCARB2-223ENST00000640640 TMEM133Q9H2Q1 129 aa14.61□□□□□ -0.07
SCARB2-223ENST00000640640 PRB3Q04118 309 aaPredicted RBP14.61□□□□□ -0.07
SCARB2-223ENST00000640640 COLCA1Q6ZS62 124 aa14.61□□□□□ -0.07
SCARB2-223ENST00000640640 SRSF12Q8WXF0 261 aaKnown RBP14.61□□□□□ -0.07
SCARB2-223ENST00000640640 SDF2L1Q9HCN8 221 aa14.61□□□□□ -0.07
SCARB2-223ENST00000640640 BET1LQ9NYM9 111 aa14.61□□□□□ -0.07
SCARB2-223ENST00000640640 SPG11Q96JI7 2443 aa14.61□□□□□ -0.07
SCARB2-223ENST00000640640 RBPMS2Q6ZRY4 209 aaKnown RBP14.61□□□□□ -0.07
SCARB2-223ENST00000640640 PGLYRP4Q96LB8 373 aa14.61□□□□□ -0.07
SCARB2-223ENST00000640640 CCL20P78556 96 aa14.61□□□□□ -0.07
SCARB2-223ENST00000640640 ICAM4Q14773 271 aa14.61□□□□□ -0.07
SCARB2-223ENST00000640640 METRNQ9UJH8 293 aa14.61□□□□□ -0.07
SCARB2-223ENST00000640640 S4R3C0 116 aa14.61□□□□□ -0.07
SCARB2-223ENST00000640640 ACACBO00763 2458 aa14.6□□□□□ -0.07
SCARB2-223ENST00000640640 SCO2A0A1W2PP80 73 aa14.6□□□□□ -0.07
SCARB2-223ENST00000640640 OR8A1Q8NGG7 326 aa14.6□□□□□ -0.07
SCARB2-223ENST00000640640 C1orf147Q96MC9 270 aaPredicted RBP14.6□□□□□ -0.07
SCARB2-223ENST00000640640 SLC25A33Q9BSK2 321 aa14.6□□□□□ -0.07
SCARB2-223ENST00000640640 MIR17HGQ75NE6 70 aa14.6□□□□□ -0.07
SCARB2-223ENST00000640640 WDR83OSQ9Y284 106 aa14.6□□□□□ -0.07
SCARB2-223ENST00000640640 TRBV6-6A0A0A6YYG2 114 aa14.6□□□□□ -0.07
SCARB2-223ENST00000640640 CDKN1AP38936 164 aa14.6□□□□□ -0.07
SCARB2-223ENST00000640640 TFPI2P48307 235 aa14.6□□□□□ -0.07
SCARB2-223ENST00000640640 TWIST1Q15672 202 aa14.6□□□□□ -0.07
SCARB2-223ENST00000640640 GOLGB1Q14789 3259 aaKnown RBP14.6□□□□□ -0.07
SCARB2-223ENST00000640640 MGPP08493 103 aa14.59□□□□□ -0.07
SCARB2-223ENST00000640640 SRIP30626 198 aa14.59□□□□□ -0.07
SCARB2-223ENST00000640640 Q6P435 159 aa14.59□□□□□ -0.07
SCARB2-223ENST00000640640 CD177Q8N6Q3 437 aa14.59□□□□□ -0.07
SCARB2-223ENST00000640640 ZNF738Q8NE65 137 aa14.59□□□□□ -0.07
SCARB2-223ENST00000640640 MLNRO43193 412 aa14.59□□□□□ -0.07
SCARB2-223ENST00000640640 IGKV1-5P01602 117 aa14.59□□□□□ -0.07
SCARB2-223ENST00000640640 FOSL1P15407 271 aa14.59□□□□□ -0.07
SCARB2-223ENST00000640640 RAB9AP51151 201 aa14.59□□□□□ -0.07
SCARB2-223ENST00000640640 LINC00518Q8N0U6 118 aa14.59□□□□□ -0.07
SCARB2-223ENST00000640640 OR10J6PQ8NGY7 276 aa14.59□□□□□ -0.07
SCARB2-223ENST00000640640 PLXNB3Q9ULL4 1909 aa14.59□□□□□ -0.07
SCARB2-223ENST00000640640 DYNLRB2Q8TF09 96 aa14.59□□□□□ -0.07
SCARB2-223ENST00000640640 LOC389332A0A1B0GUA5 103 aa14.59□□□□□ -0.07
SCARB2-223ENST00000640640 PSG9Q00887 426 aa14.59□□□□□ -0.07
SCARB2-223ENST00000640640 IGHV3OR16-13A0A075B7E8 117 aa14.58□□□□□ -0.07
SCARB2-223ENST00000640640 IGHV3-74A0A0B4J1X5 117 aa14.58□□□□□ -0.07
SCARB2-223ENST00000640640 GRIFINA4D1Z8 144 aa14.58□□□□□ -0.07
SCARB2-223ENST00000640640 IGKV3-15P01624 115 aa14.58□□□□□ -0.07
SCARB2-223ENST00000640640 CBLN1P23435 193 aa14.58□□□□□ -0.07
SCARB2-223ENST00000640640 Q6ZS49 121 aa14.58□□□□□ -0.07
SCARB2-223ENST00000640640 DOCK11Q5JSL3 2073 aa14.58□□□□□ -0.08
SCARB2-223ENST00000640640 A0A087WWC5 75 aa14.58□□□□□ -0.08
SCARB2-223ENST00000640640 GCGP01275 180 aa14.58□□□□□ -0.08
SCARB2-223ENST00000640640 NPPCP23582 126 aa14.58□□□□□ -0.08
SCARB2-223ENST00000640640 OR52E5Q8NH55 327 aa14.58□□□□□ -0.08
SCARB2-223ENST00000640640 CCL19Q99731 98 aa14.58□□□□□ -0.08
SCARB2-223ENST00000640640 AMY1AP04745 511 aa14.58□□□□□ -0.08
SCARB2-223ENST00000640640 SRSF4Q08170 494 aaKnown RBP14.58□□□□□ -0.08
SCARB2-223ENST00000640640 TBR1Q16650 682 aa14.58□□□□□ -0.08
SCARB2-223ENST00000640640 TM4SF20Q53R12 229 aa14.58□□□□□ -0.08
SCARB2-223ENST00000640640 FOXA2Q9Y261 457 aaPredicted RBP14.58□□□□□ -0.08
SCARB2-223ENST00000640640 SLC17A3O00476 420 aa14.58□□□□□ -0.08
SCARB2-223ENST00000640640 ATP5G2Q06055 141 aa14.58□□□□□ -0.08
SCARB2-223ENST00000640640 DGAT2L7PQ6IED9 249 aa14.58□□□□□ -0.08
SCARB2-223ENST00000640640 PPP1R27Q86WC6 154 aa14.58□□□□□ -0.08
SCARB2-223ENST00000640640 HS3ST6Q96QI5 342 aa14.58□□□□□ -0.08
SCARB2-223ENST00000640640 PRCDQ00LT1 54 aa14.57□□□□□ -0.08
SCARB2-223ENST00000640640 TUBA4BQ9H853 241 aa14.57□□□□□ -0.08
SCARB2-223ENST00000640640 C21orf62Q9NYP8 219 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms