RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-238	ENST00000640421	ENY2	Q9NPA8	101 aa		13.97	□□□□□ -0.17
SPIN3-238	ENST00000640421	RNASE1	P07998	156 aa	Known RBP	13.96	□□□□□ -0.17
SPIN3-238	ENST00000640421	HKR1	P10072	659 aa		13.96	□□□□□ -0.17
SPIN3-238	ENST00000640421	RNASE2	P10153	161 aa	Known RBP	13.96	□□□□□ -0.17
SPIN3-238	ENST00000640421	TMEM267	Q0VDI3	215 aa	Predicted RBP	13.96	□□□□□ -0.17
SPIN3-238	ENST00000640421	SLC35E3	Q7Z769	313 aa		13.96	□□□□□ -0.17
SPIN3-238	ENST00000640421	NOL4L	Q96MY1	436 aa	Predicted RBP	13.96	□□□□□ -0.17
SPIN3-238	ENST00000640421	DMRT1	Q9Y5R6	373 aa		13.96	□□□□□ -0.17
SPIN3-238	ENST00000640421	C2CD3	Q4AC94	2353 aa		13.96	□□□□□ -0.18
SPIN3-238	ENST00000640421	HMSD	A8MTL9	139 aa		13.95	□□□□□ -0.18
SPIN3-238	ENST00000640421	TRIM77	I1YAP6	450 aa		13.95	□□□□□ -0.18
SPIN3-238	ENST00000640421	TSC22D2	O75157	780 aa		13.95	□□□□□ -0.18
SPIN3-238	ENST00000640421	HNRNPC	P07910	306 aa	Known RBP eCLIP	13.95	□□□□□ -0.18
SPIN3-238	ENST00000640421	MFAP2	P55001	183 aa		13.95	□□□□□ -0.18
SPIN3-238	ENST00000640421	RPL23A	P62750	156 aa	Known RBP	13.95	□□□□□ -0.18
SPIN3-238	ENST00000640421	SRSF2	Q01130	221 aa	Known RBP	13.95	□□□□□ -0.18
SPIN3-238	ENST00000640421	ECSCR	Q19T08	205 aa		13.95	□□□□□ -0.18
SPIN3-238	ENST00000640421	C19orf54	Q5BKX5	351 aa		13.95	□□□□□ -0.18
SPIN3-238	ENST00000640421	TMEM252	Q8N6L7	170 aa		13.95	□□□□□ -0.18
SPIN3-238	ENST00000640421	SLC24A4	Q8NFF2	622 aa		13.95	□□□□□ -0.18
SPIN3-238	ENST00000640421	BSCL2	Q96G97	398 aa	Predicted RBP	13.95	□□□□□ -0.18
SPIN3-238	ENST00000640421	HYLS1	Q96M11	299 aa		13.95	□□□□□ -0.18
SPIN3-238	ENST00000640421	P2RX4	Q99571	388 aa		13.95	□□□□□ -0.18
SPIN3-238	ENST00000640421	NPFFR1	Q9GZQ6	430 aa		13.95	□□□□□ -0.18
SPIN3-238	ENST00000640421	IFNA10	P01566	189 aa		13.95	□□□□□ -0.18
SPIN3-238	ENST00000640421	IGF1	P05019	195 aa		13.95	□□□□□ -0.18
SPIN3-238	ENST00000640421	METTL15P1	P0C7V9	234 aa		13.95	□□□□□ -0.18
SPIN3-238	ENST00000640421	CXCL2	P19875	107 aa		13.95	□□□□□ -0.18
SPIN3-238	ENST00000640421	RPL12	P30050	165 aa	Known RBP	13.95	□□□□□ -0.18
SPIN3-238	ENST00000640421	EIF2B2	P49770	351 aa	Known RBP	13.95	□□□□□ -0.18
SPIN3-238	ENST00000640421	TMEM14EP	Q6UXP3	125 aa		13.95	□□□□□ -0.18
SPIN3-238	ENST00000640421	HAPLN4	Q86UW8	402 aa		13.95	□□□□□ -0.18
SPIN3-238	ENST00000640421	SRSF8	Q9BRL6	282 aa	Known RBP	13.95	□□□□□ -0.18
SPIN3-238	ENST00000640421		U3KQ87	197 aa		13.95	□□□□□ -0.18
SPIN3-238	ENST00000640421	CST7	O76096	145 aa		13.94	□□□□□ -0.18
SPIN3-238	ENST00000640421	CTRB1	P17538	263 aa		13.94	□□□□□ -0.18
SPIN3-238	ENST00000640421	NPY1R	P25929	384 aa		13.94	□□□□□ -0.18
SPIN3-238	ENST00000640421	CRIP2	P52943	208 aa	Predicted RBP	13.94	□□□□□ -0.18
SPIN3-238	ENST00000640421	AP2S1	P53680	142 aa	Predicted RBP	13.94	□□□□□ -0.18
SPIN3-238	ENST00000640421	ERH	P84090	104 aa	Known RBP	13.94	□□□□□ -0.18
SPIN3-238	ENST00000640421	EWSR1	Q01844	656 aa	Known RBP eCLIP	13.94	□□□□□ -0.18
SPIN3-238	ENST00000640421	NHLH2	Q02577	135 aa		13.94	□□□□□ -0.18
SPIN3-238	ENST00000640421	CTRB2	Q6GPI1	263 aa		13.94	□□□□□ -0.18
SPIN3-238	ENST00000640421	LAMTOR1	Q6IAA8	161 aa		13.94	□□□□□ -0.18
SPIN3-238	ENST00000640421	AQP10	Q96PS8	301 aa		13.94	□□□□□ -0.18
SPIN3-238	ENST00000640421	PRSS22	Q9GZN4	317 aa		13.94	□□□□□ -0.18
SPIN3-238	ENST00000640421	STRAP	Q9Y3F4	350 aa	Known RBP	13.94	□□□□□ -0.18
SPIN3-238	ENST00000640421	PMS2P5	A8MQ11	134 aa		13.93	□□□□□ -0.18
SPIN3-238	ENST00000640421	HTR2B	P41595	481 aa		13.93	□□□□□ -0.18
SPIN3-238	ENST00000640421	ARL16	Q0P5N6	197 aa		13.93	□□□□□ -0.18
SPIN3-238	ENST00000640421	LGALSL	Q3ZCW2	172 aa	Predicted RBP	13.93	□□□□□ -0.18
SPIN3-238	ENST00000640421	UNQ5815/PRO19632	Q6UWF5	114 aa		13.93	□□□□□ -0.18
SPIN3-238	ENST00000640421	ZNF114	Q8NC26	417 aa		13.93	□□□□□ -0.18
SPIN3-238	ENST00000640421	PAIP2B	Q9ULR5	123 aa	Known RBP	13.93	□□□□□ -0.18
SPIN3-238	ENST00000640421	SOX15	O60248	233 aa		13.93	□□□□□ -0.18
SPIN3-238	ENST00000640421	PRH1	P02810	166 aa		13.93	□□□□□ -0.18
SPIN3-238	ENST00000640421	CRYGC	P07315	174 aa		13.93	□□□□□ -0.18
SPIN3-238	ENST00000640421	SNCA	P37840	140 aa		13.93	□□□□□ -0.18
SPIN3-238	ENST00000640421	AKIRIN2	Q53H80	203 aa		13.93	□□□□□ -0.18
SPIN3-238	ENST00000640421	C2orf83	Q53S99	150 aa		13.93	□□□□□ -0.18
SPIN3-238	ENST00000640421	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	13.93	□□□□□ -0.18
SPIN3-238	ENST00000640421		Q8N2B8	174 aa		13.93	□□□□□ -0.18
SPIN3-238	ENST00000640421	C9orf62	Q8N4C0	152 aa		13.93	□□□□□ -0.18
SPIN3-238	ENST00000640421	TTC9C	Q8N5M4	171 aa		13.93	□□□□□ -0.18
SPIN3-238	ENST00000640421	OR5T1	Q8NG75	326 aa		13.93	□□□□□ -0.18
SPIN3-238	ENST00000640421	MFF	Q9GZY8	342 aa		13.93	□□□□□ -0.18
SPIN3-238	ENST00000640421	F11R	Q9Y624	299 aa	Known RBP	13.93	□□□□□ -0.18
SPIN3-238	ENST00000640421	TRAV41	A0A0B4J266	112 aa		13.92	□□□□□ -0.18
SPIN3-238	ENST00000640421	NPIPB5	A8MRT5	1133 aa		13.92	□□□□□ -0.18
SPIN3-238	ENST00000640421	TCF21	O43680	179 aa		13.92	□□□□□ -0.18
SPIN3-238	ENST00000640421	FBXO24	O75426	580 aa		13.92	□□□□□ -0.18
SPIN3-238	ENST00000640421		Q6ZSV7	163 aa		13.92	□□□□□ -0.18
SPIN3-238	ENST00000640421	INO80E	Q8NBZ0	244 aa	Predicted RBP	13.92	□□□□□ -0.18
SPIN3-238	ENST00000640421	WNT10A	Q9GZT5	417 aa		13.92	□□□□□ -0.18
SPIN3-238	ENST00000640421	PRSS46	E5RG02	174 aa		13.91	□□□□□ -0.18
SPIN3-238	ENST00000640421	AP4M1	O00189	453 aa		13.91	□□□□□ -0.18
SPIN3-238	ENST00000640421	LY86	O95711	162 aa		13.91	□□□□□ -0.18
SPIN3-238	ENST00000640421	OR8G2P	Q6IF36	304 aa		13.91	□□□□□ -0.18
SPIN3-238	ENST00000640421	ACOT7L	Q6ZUV0	252 aa		13.91	□□□□□ -0.18
SPIN3-238	ENST00000640421	TMEM217	Q8N7C4	229 aa		13.91	□□□□□ -0.18
SPIN3-238	ENST00000640421	PPP1R14B	Q96C90	147 aa		13.91	□□□□□ -0.18
SPIN3-238	ENST00000640421	SULT1A1	P50225	295 aa		13.91	□□□□□ -0.18
SPIN3-238	ENST00000640421	PVRIG	Q6DKI7	326 aa		13.91	□□□□□ -0.18
SPIN3-238	ENST00000640421	MRPL41	Q8IXM3	137 aa	Known RBP	13.91	□□□□□ -0.18
SPIN3-238	ENST00000640421	STPG2	Q8N412	459 aa		13.91	□□□□□ -0.18
SPIN3-238	ENST00000640421	OR1P1	Q8NH06	330 aa		13.91	□□□□□ -0.18
SPIN3-238	ENST00000640421	JMJD8	Q96S16	334 aa		13.91	□□□□□ -0.18
SPIN3-238	ENST00000640421	SERTAD4	Q9NUC0	356 aa		13.91	□□□□□ -0.18
SPIN3-238	ENST00000640421	BOLA1	Q9Y3E2	137 aa		13.91	□□□□□ -0.18
SPIN3-238	ENST00000640421	OR8U8	P0C7N1	319 aa		13.9	□□□□□ -0.18
SPIN3-238	ENST00000640421	PPIF	P30405	207 aa	Known RBP	13.9	□□□□□ -0.18
SPIN3-238	ENST00000640421	CFHR3	Q02985	330 aa		13.9	□□□□□ -0.18
SPIN3-238	ENST00000640421	FAM110D	Q8TAY7	271 aa	Predicted RBP	13.9	□□□□□ -0.18
SPIN3-238	ENST00000640421	FANCD2OS	Q96PS1	177 aa		13.9	□□□□□ -0.18
SPIN3-238	ENST00000640421	SLC25A31	Q9H0C2	315 aa		13.9	□□□□□ -0.18
SPIN3-238	ENST00000640421	HSPB11	Q9Y547	144 aa		13.9	□□□□□ -0.18
SPIN3-238	ENST00000640421	IFNA4	P05014	189 aa		13.89	□□□□□ -0.19
SPIN3-238	ENST00000640421	RPP30	P78346	268 aa	Known RBP	13.89	□□□□□ -0.19
SPIN3-238	ENST00000640421	DEFA5	Q01523	94 aa		13.89	□□□□□ -0.19
SPIN3-238	ENST00000640421	ZNF345	Q14585	488 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms