RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 IGHV3-48P01763 117 aa10.97□□□□□ -0.65
SYNE2-228ENST00000639659 RLN1P04808 185 aa10.97□□□□□ -0.65
SYNE2-228ENST00000639659 HERV-K104P61576 105 aa10.97□□□□□ -0.65
SYNE2-228ENST00000639659 RPL11P62913 178 aaKnown RBP10.97□□□□□ -0.65
SYNE2-228ENST00000639659 RELQ04864 619 aaPredicted RBP10.97□□□□□ -0.65
SYNE2-228ENST00000639659 POU2AF1Q16633 256 aa10.97□□□□□ -0.65
SYNE2-228ENST00000639659 TCF24Q7RTU0 167 aa10.97□□□□□ -0.65
SYNE2-228ENST00000639659 HSD17B13Q7Z5P4 300 aaPredicted RBP10.97□□□□□ -0.65
SYNE2-228ENST00000639659 TSPAN14Q8NG11 270 aa10.97□□□□□ -0.65
SYNE2-228ENST00000639659 SLC25A46Q96AG3 418 aa10.97□□□□□ -0.65
SYNE2-228ENST00000639659 PLEKHA2Q9HB19 425 aa10.97□□□□□ -0.65
SYNE2-228ENST00000639659 RHBDL2Q9NX52 303 aa10.97□□□□□ -0.65
SYNE2-228ENST00000639659 ETV7Q9Y603 341 aa10.97□□□□□ -0.65
SYNE2-228ENST00000639659 RYR1P21817 5038 aa10.97□□□□□ -0.65
SYNE2-228ENST00000639659 MEIS3P1A6NDR6 274 aa10.96□□□□□ -0.65
SYNE2-228ENST00000639659 MARCH11A6NNE9 402 aa10.96□□□□□ -0.65
SYNE2-228ENST00000639659 DNASE2O00115 360 aaPredicted RBP10.96□□□□□ -0.65
SYNE2-228ENST00000639659 SNAPC5O75971 98 aa10.96□□□□□ -0.65
SYNE2-228ENST00000639659 KRASP01116 189 aa10.96□□□□□ -0.65
SYNE2-228ENST00000639659 G6PCP35575 357 aa10.96□□□□□ -0.65
SYNE2-228ENST00000639659 TCTAP57738 103 aa10.96□□□□□ -0.65
SYNE2-228ENST00000639659 DEFB131AP59861 70 aa10.96□□□□□ -0.65
SYNE2-228ENST00000639659 PAFAH1B2P68402 229 aa10.96□□□□□ -0.65
SYNE2-228ENST00000639659 MSMO1Q15800 293 aa10.96□□□□□ -0.65
SYNE2-228ENST00000639659 CENPSQ8N2Z9 138 aa10.96□□□□□ -0.65
SYNE2-228ENST00000639659 COMMD9Q9P000 198 aa10.96□□□□□ -0.65
SYNE2-228ENST00000639659 TRAV14DV4A0A0A6YYC5 116 aa10.95□□□□□ -0.66
SYNE2-228ENST00000639659 ST8SIA3O43173 380 aa10.95□□□□□ -0.66
SYNE2-228ENST00000639659 CTSGP08311 255 aa10.95□□□□□ -0.66
SYNE2-228ENST00000639659 LPAR6P43657 344 aa10.95□□□□□ -0.66
SYNE2-228ENST00000639659 HOGA1Q86XE5 327 aa10.95□□□□□ -0.66
SYNE2-228ENST00000639659 STHQ8IWL8 128 aa10.95□□□□□ -0.66
SYNE2-228ENST00000639659 PINX1Q96BK5 328 aaKnown RBP10.95□□□□□ -0.66
SYNE2-228ENST00000639659 NDUFA4L2Q9NRX3 87 aa10.95□□□□□ -0.66
SYNE2-228ENST00000639659 IGHV4-28A0A0C4DH34 117 aa10.94□□□□□ -0.66
SYNE2-228ENST00000639659 C11orf94C9JXX5 98 aa10.94□□□□□ -0.66
SYNE2-228ENST00000639659 ANKRD65E5RJM6 399 aa10.94□□□□□ -0.66
SYNE2-228ENST00000639659 HLA-DMBP28068 263 aa10.94□□□□□ -0.66
SYNE2-228ENST00000639659 MFAP4P55083 255 aa10.94□□□□□ -0.66
SYNE2-228ENST00000639659 MXD1Q05195 221 aa10.94□□□□□ -0.66
SYNE2-228ENST00000639659 SFXN4Q6P4A7 337 aa10.94□□□□□ -0.66
SYNE2-228ENST00000639659 Q6ZTC4 211 aa10.94□□□□□ -0.66
SYNE2-228ENST00000639659 ST8SIA2Q92186 375 aa10.94□□□□□ -0.66
SYNE2-228ENST00000639659 CNBD2Q96M20 576 aa10.94□□□□□ -0.66
SYNE2-228ENST00000639659 TMEM56Q96MV1 263 aa10.94□□□□□ -0.66
SYNE2-228ENST00000639659 TXNL4BQ9NX01 149 aaKnown RBP10.94□□□□□ -0.66
SYNE2-228ENST00000639659 RABAC1Q9UI14 185 aa10.94□□□□□ -0.66
SYNE2-228ENST00000639659 BLOC1S6Q9UL45 172 aa10.94□□□□□ -0.66
SYNE2-228ENST00000639659 DNAH6Q9C0G6 4158 aa10.93□□□□□ -0.66
SYNE2-228ENST00000639659 IGHV4-4A0A075B6R2 117 aa10.93□□□□□ -0.66
SYNE2-228ENST00000639659 M0R2N4 97 aa10.93□□□□□ -0.66
SYNE2-228ENST00000639659 GNG7O60262 68 aa10.93□□□□□ -0.66
SYNE2-228ENST00000639659 PSMB9P28065 219 aa10.93□□□□□ -0.66
SYNE2-228ENST00000639659 LINC00336Q6ZUF6 198 aa10.93□□□□□ -0.66
SYNE2-228ENST00000639659 TPRA1Q86W33 373 aa10.93□□□□□ -0.66
SYNE2-228ENST00000639659 FAM24BQ8N5W8 94 aa10.93□□□□□ -0.66
SYNE2-228ENST00000639659 Q8NAQ8 132 aa10.93□□□□□ -0.66
SYNE2-228ENST00000639659 OR5H6Q8NGV6 325 aa10.93□□□□□ -0.66
SYNE2-228ENST00000639659 NRG4Q8WWG1 115 aa10.93□□□□□ -0.66
SYNE2-228ENST00000639659 FCAMRQ8WWV6 532 aa10.93□□□□□ -0.66
SYNE2-228ENST00000639659 ATP6V0BQ99437 205 aa10.93□□□□□ -0.66
SYNE2-228ENST00000639659 GINS3Q9BRX5 216 aa10.93□□□□□ -0.66
SYNE2-228ENST00000639659 IFT46Q9NQC8 304 aa10.93□□□□□ -0.66
SYNE2-228ENST00000639659 EHFQ9NZC4 300 aa10.93□□□□□ -0.66
SYNE2-228ENST00000639659 TRAV10A0A0B4J240 114 aa10.92□□□□□ -0.66
SYNE2-228ENST00000639659 C15orf61A6NNL5 157 aa10.92□□□□□ -0.66
SYNE2-228ENST00000639659 DFFBO76075 338 aa10.92□□□□□ -0.66
SYNE2-228ENST00000639659 APOHP02749 345 aaPredicted RBP10.92□□□□□ -0.66
SYNE2-228ENST00000639659 F2RP25116 425 aa10.92□□□□□ -0.66
SYNE2-228ENST00000639659 IDNKQ5T6J7 187 aa10.92□□□□□ -0.66
SYNE2-228ENST00000639659 ZNF767PQ75MW2 155 aa10.92□□□□□ -0.66
SYNE2-228ENST00000639659 ZNF414Q96IQ9 312 aa10.92□□□□□ -0.66
SYNE2-228ENST00000639659 OR10C1Q96KK4 312 aa10.92□□□□□ -0.66
SYNE2-228ENST00000639659 MS4A6AQ9H2W1 248 aa10.92□□□□□ -0.66
SYNE2-228ENST00000639659 PRNDQ9UKY0 176 aa10.92□□□□□ -0.66
SYNE2-228ENST00000639659 PRSS29PA6NIE9 313 aa10.91□□□□□ -0.66
SYNE2-228ENST00000639659 DBX1A6NMT0 343 aa10.91□□□□□ -0.66
SYNE2-228ENST00000639659 MT-CO2P00403 227 aa10.91□□□□□ -0.66
SYNE2-228ENST00000639659 FGF2P09038 288 aa10.91□□□□□ -0.66
SYNE2-228ENST00000639659 CLEC2LP0C7M8 214 aa10.91□□□□□ -0.66
SYNE2-228ENST00000639659 RBMY1A1P0DJD3 496 aaKnown RBP10.91□□□□□ -0.66
SYNE2-228ENST00000639659 RBMY1CP0DJD4 496 aa10.91□□□□□ -0.66
SYNE2-228ENST00000639659 GNRHRP30968 328 aa10.91□□□□□ -0.66
SYNE2-228ENST00000639659 RBMY1FQ15415 496 aaKnown RBP10.91□□□□□ -0.66
SYNE2-228ENST00000639659 FAM90A2PQ658T7 463 aa10.91□□□□□ -0.66
SYNE2-228ENST00000639659 OR5AP2Q8NGF4 316 aa10.91□□□□□ -0.66
SYNE2-228ENST00000639659 OR1P1Q8NH06 330 aa10.91□□□□□ -0.66
SYNE2-228ENST00000639659 BORCS5Q969J3 196 aa10.91□□□□□ -0.66
SYNE2-228ENST00000639659 DGCR14Q96DF8 476 aaKnown RBP10.91□□□□□ -0.66
SYNE2-228ENST00000639659 SLC25A38Q96DW6 304 aa10.91□□□□□ -0.66
SYNE2-228ENST00000639659 ZNF2Q9BSG1 426 aaPredicted RBP10.91□□□□□ -0.66
SYNE2-228ENST00000639659 NXF2Q9GZY0 626 aaKnown RBP10.91□□□□□ -0.66
SYNE2-228ENST00000639659 CLEC5AQ9NY25 188 aa10.91□□□□□ -0.66
SYNE2-228ENST00000639659 KNCNA6PVL3 124 aa10.9□□□□□ -0.66
SYNE2-228ENST00000639659 I3L2K1 104 aa10.9□□□□□ -0.66
SYNE2-228ENST00000639659 PGLYRP1O75594 196 aaPredicted RBP10.9□□□□□ -0.66
SYNE2-228ENST00000639659 LILRB2Q8N423 598 aa10.9□□□□□ -0.66
SYNE2-228ENST00000639659 STXBP6Q8NFX7 210 aa10.9□□□□□ -0.66
SYNE2-228ENST00000639659 MOB3AQ96BX8 217 aa10.9□□□□□ -0.66
SYNE2-228ENST00000639659 AUNIPQ9H7T9 357 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms