RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 CD177Q8N6Q3 437 aa2.27□□□□□ -2.05
CCDC7-213ENST00000639290 CT45A3Q8NHU0 189 aa2.27□□□□□ -2.05
CCDC7-213ENST00000639290 SLC35G5Q96KT7 338 aa2.27□□□□□ -2.05
CCDC7-213ENST00000639290 PPP1R36Q96LQ0 422 aa2.27□□□□□ -2.05
CCDC7-213ENST00000639290 SULT4A1Q9BR01 284 aa2.27□□□□□ -2.05
CCDC7-213ENST00000639290 AGMATQ9BSE5 352 aa2.27□□□□□ -2.05
CCDC7-213ENST00000639290 SCRT1Q9BWW7 348 aa2.27□□□□□ -2.05
CCDC7-213ENST00000639290 ZNF446Q9NWS9 450 aa2.27□□□□□ -2.05
CCDC7-213ENST00000639290 SLC25A37Q9NYZ2 338 aa2.27□□□□□ -2.05
CCDC7-213ENST00000639290 RIMS3Q9UJD0 308 aa2.27□□□□□ -2.05
CCDC7-213ENST00000639290 TFR2Q9UP52 801 aa2.27□□□□□ -2.05
CCDC7-213ENST00000639290 DSCAML1Q8TD84 2053 aa2.27□□□□□ -2.05
CCDC7-213ENST00000639290 A0A1B0GWB2 263 aa2.27□□□□□ -2.05
CCDC7-213ENST00000639290 KPNA4O00629 521 aaPredicted RBP2.27□□□□□ -2.05
CCDC7-213ENST00000639290 ATP8B1O43520 1251 aa2.27□□□□□ -2.05
CCDC7-213ENST00000639290 LALBAP00709 142 aa2.27□□□□□ -2.05
CCDC7-213ENST00000639290 IL6P05231 212 aa2.27□□□□□ -2.05
CCDC7-213ENST00000639290 TBPP20226 339 aa2.27□□□□□ -2.05
CCDC7-213ENST00000639290 IL3RAP26951 378 aa2.27□□□□□ -2.05
CCDC7-213ENST00000639290 GLP1RP43220 463 aa2.27□□□□□ -2.05
CCDC7-213ENST00000639290 SERPINB8P50452 374 aa2.27□□□□□ -2.05
CCDC7-213ENST00000639290 GPM6AP51674 278 aa2.27□□□□□ -2.05
CCDC7-213ENST00000639290 CKAP4Q07065 602 aaKnown RBP2.27□□□□□ -2.05
CCDC7-213ENST00000639290 TNFAIP8L2Q6P589 184 aaPredicted RBP2.27□□□□□ -2.05
CCDC7-213ENST00000639290 DRAM2Q6UX65 266 aa2.27□□□□□ -2.05
CCDC7-213ENST00000639290 ENTHD1Q8IYW4 607 aa2.27□□□□□ -2.05
CCDC7-213ENST00000639290 LINC00311Q8N616 119 aa2.27□□□□□ -2.05
CCDC7-213ENST00000639290 NPBQ8NG41 125 aa2.27□□□□□ -2.05
CCDC7-213ENST00000639290 TSNAXQ99598 290 aaKnown RBP2.27□□□□□ -2.05
CCDC7-213ENST00000639290 CCDC28BQ9BUN5 200 aa2.27□□□□□ -2.05
CCDC7-213ENST00000639290 IL1RAPQ9NPH3 570 aa2.27□□□□□ -2.05
CCDC7-213ENST00000639290 TAS2R5Q9NYW4 299 aa2.27□□□□□ -2.05
CCDC7-213ENST00000639290 BTNL2Q9UIR0 455 aa2.27□□□□□ -2.05
CCDC7-213ENST00000639290 PCTPQ9UKL6 214 aa2.27□□□□□ -2.05
CCDC7-213ENST00000639290 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.26□□□□□ -2.05
CCDC7-213ENST00000639290 TRAV26-2A0A0B4J265 109 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 A0A1W2PQL4 384 aaPredicted RBP2.26□□□□□ -2.05
CCDC7-213ENST00000639290 FAM223BA6NKX1 122 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 SMKR1H3BMG3 65 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 PGRMC1O00264 195 aaKnown RBP2.26□□□□□ -2.05
CCDC7-213ENST00000639290 ZNF324O75467 553 aaPredicted RBP2.26□□□□□ -2.05
CCDC7-213ENST00000639290 NDUFA3O95167 84 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 GCGP01275 180 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 PRSS1P07477 247 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 RPS17P08708 135 aaKnown RBP2.26□□□□□ -2.05
CCDC7-213ENST00000639290 HIST1H1CP16403 213 aaKnown RBP2.26□□□□□ -2.05
CCDC7-213ENST00000639290 CXCR4P61073 352 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 PAFAH1B2P68402 229 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 ST3GAL4Q11206 333 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 RAB31Q13636 194 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 PDZD11Q5EBL8 140 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 GCSAMLQ5JQS6 135 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 MUC21Q5SSG8 566 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 OR10K2Q6IF99 312 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 FAM223AQ8IWN6 122 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 HS3ST5Q8IZT8 346 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 ZNF680Q8NEM1 530 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 OR10G7Q8NGN6 311 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 C11orf52Q96A22 123 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 EEF1AKMT3Q96AZ1 226 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 YIPF6Q96EC8 236 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 ZNF486Q96H40 463 aaPredicted RBP2.26□□□□□ -2.05
CCDC7-213ENST00000639290 C9orf85Q96MD7 179 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 C1QTNF4Q9BXJ3 329 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 ZNF436Q9C0F3 470 aaPredicted RBP2.26□□□□□ -2.05
CCDC7-213ENST00000639290 CACYBPQ9HB71 228 aaKnown RBP2.26□□□□□ -2.05
CCDC7-213ENST00000639290 IFT46Q9NQC8 304 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 FGFR1OP2Q9NVK5 253 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 MLXQ9UH92 298 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 PSORS1C2Q9UIG4 136 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 SNX24Q9Y343 169 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 RFNGQ9Y644 331 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 TRGV10A0A0A0MS01 117 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 TRAV2A0A0B4J234 112 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 OR2T8A6NH00 312 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 ZNF729A6NN14 1252 aaPredicted RBP2.26□□□□□ -2.05
CCDC7-213ENST00000639290 HPGDSO60760 199 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 FKBP6O75344 327 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 ZNF737O75373 536 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 HLA-AP01891 365 aaKnown RBP2.26□□□□□ -2.05
CCDC7-213ENST00000639290 TSPAN19P0C672 248 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 MARCKSL1P49006 195 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 HCCSP53701 268 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 PAX9P55771 341 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 PRKCDQ05655 676 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 POU2AF1Q16633 256 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 ZBED5Q49AG3 693 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 OGFRL1Q5TC84 451 aaPredicted RBP2.26□□□□□ -2.05
CCDC7-213ENST00000639290 ZNF664Q8N3J9 261 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 TEX47Q8TBZ9 253 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 DYNC2LI1Q8TCX1 351 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 PTH2Q96A98 100 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 CCDC42Q96M95 316 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 SCGB3A2Q96PL1 93 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 LINC00574Q9H8X3 128 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 HES4Q9HCC6 221 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 Q9UF83 564 aa2.26□□□□□ -2.05
CCDC7-213ENST00000639290 A0A0B4J2E0 115 aa2.25□□□□□ -2.05
CCDC7-213ENST00000639290 A0A1B0GX12 115 aa2.25□□□□□ -2.05
CCDC7-213ENST00000639290 RFPL4AA6NLU0 287 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms