RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 CACNA1DQ01668 2161 aa6.05□□□□□ -1.44
SCARB2-209ENST00000638409 ANKRD17O75179 2603 aaKnown RBP6.05□□□□□ -1.44
SCARB2-209ENST00000638409 TINCRA0A1B0GVN0 87 aa6.05□□□□□ -1.44
SCARB2-209ENST00000638409 TMEM269A0A1B0GVZ9 245 aa6.05□□□□□ -1.44
SCARB2-209ENST00000638409 MSGN1A6NI15 193 aa6.05□□□□□ -1.44
SCARB2-209ENST00000638409 CD55P08174 381 aa6.05□□□□□ -1.44
SCARB2-209ENST00000638409 MUC1P15941 1255 aaPredicted RBP6.05□□□□□ -1.44
SCARB2-209ENST00000638409 FCGR2CP31995 323 aa6.05□□□□□ -1.44
SCARB2-209ENST00000638409 EFNA4P52798 201 aa6.05□□□□□ -1.44
SCARB2-209ENST00000638409 OR8G5Q8NG78 346 aa6.05□□□□□ -1.44
SCARB2-209ENST00000638409 SEC22AQ96IW7 307 aa6.05□□□□□ -1.44
SCARB2-209ENST00000638409 PRAC1Q96KF2 57 aa6.05□□□□□ -1.44
SCARB2-209ENST00000638409 ZNF471Q9BX82 626 aaPredicted RBP6.05□□□□□ -1.44
SCARB2-209ENST00000638409 PBOV1Q9GZY1 135 aa6.05□□□□□ -1.44
SCARB2-209ENST00000638409 ALX4Q9H161 411 aaPredicted RBP6.05□□□□□ -1.44
SCARB2-209ENST00000638409 PLCE1Q9P212 2302 aa6.05□□□□□ -1.44
SCARB2-209ENST00000638409 C5orf63A6NC05 138 aa6.05□□□□□ -1.44
SCARB2-209ENST00000638409 OR8U9P0C7N5 309 aa6.05□□□□□ -1.44
SCARB2-209ENST00000638409 DVL1P1P54792 670 aaPredicted RBP6.05□□□□□ -1.44
SCARB2-209ENST00000638409 MRPS11P82912 194 aaKnown RBP6.05□□□□□ -1.44
SCARB2-209ENST00000638409 FAM3AP98173 230 aa6.05□□□□□ -1.44
SCARB2-209ENST00000638409 OR8B8Q15620 311 aa6.05□□□□□ -1.44
SCARB2-209ENST00000638409 MPPED2Q15777 294 aa6.05□□□□□ -1.44
SCARB2-209ENST00000638409 SCGB2B2Q4G0G5 96 aa6.05□□□□□ -1.44
SCARB2-209ENST00000638409 Q6ZN92 141 aa6.05□□□□□ -1.44
SCARB2-209ENST00000638409 CCDC54Q8NEL0 328 aa6.05□□□□□ -1.44
SCARB2-209ENST00000638409 OR8B12Q8NGG6 310 aa6.05□□□□□ -1.44
SCARB2-209ENST00000638409 OR8U1Q8NH10 309 aa6.05□□□□□ -1.44
SCARB2-209ENST00000638409 C15orf40Q8WUR7 153 aa6.05□□□□□ -1.44
SCARB2-209ENST00000638409 FAM3DQ96BQ1 224 aa6.05□□□□□ -1.44
SCARB2-209ENST00000638409 REEP6Q96HR9 211 aa6.05□□□□□ -1.44
SCARB2-209ENST00000638409 MYOZ1Q9NP98 299 aaPredicted RBP6.05□□□□□ -1.44
SCARB2-209ENST00000638409 TGIF2-C20orf24A0A0A6YYL0 155 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 KANTRA0A1W2PQU2 76 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 OR5H14A6NHG9 310 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 BCL2L11O43521 198 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 SLC2A1P11166 492 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 CCL1P22362 96 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 CD34P28906 385 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 GUCA2BQ16661 112 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 GLT8D1Q68CQ7 371 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 OR10K2Q6IF99 312 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 HAGHLQ6PII5 290 aaPredicted RBP6.04□□□□□ -1.44
SCARB2-209ENST00000638409 KRTAP1-3Q8IUG1 177 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 OR51E1Q8TCB6 317 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 LYZL4Q96KX0 146 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 TAS2R8Q9NYW2 309 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 OR52A1Q9UKL2 312 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 NOP16Q9Y3C1 178 aaKnown RBP6.04□□□□□ -1.44
SCARB2-209ENST00000638409 DHRS7CA6NNS2 312 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 CD300LBA8K4G0 201 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 LYRM9A8MSI8 78 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 SNAPC5O75971 98 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 TTRP02766 147 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 ISG15P05161 165 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 CRYBA1P05813 215 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 ADCYAP1P18509 176 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 PMELP40967 661 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 DSCR9P59020 149 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 DHRS2Q13268 280 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 C4orf26Q17RF5 130 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 OR2T2Q6IF00 324 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 Q6ZR03 302 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 KCNRGQ8N5I3 272 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 OR4S1Q8NGB4 309 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 OR13G1Q8NGZ3 307 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 SEH1LQ96EE3 360 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 DYNLRB1Q9NP97 96 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 TAS2R4Q9NYW5 299 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 TNFSF18Q9UNG2 199 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 ARFGEF3Q5TH69 2177 aa6.04□□□□□ -1.44
SCARB2-209ENST00000638409 TMEM212A6NML5 194 aa6.03□□□□□ -1.44
SCARB2-209ENST00000638409 DISC1C4P0D8 188 aa6.03□□□□□ -1.44
SCARB2-209ENST00000638409 H7C1H1 209 aa6.03□□□□□ -1.44
SCARB2-209ENST00000638409 IGHV1-46P01743 117 aa6.03□□□□□ -1.44
SCARB2-209ENST00000638409 HLA-AP01891 365 aaKnown RBP6.03□□□□□ -1.44
SCARB2-209ENST00000638409 SPNS3Q6ZMD2 512 aa6.03□□□□□ -1.44
SCARB2-209ENST00000638409 C14orf144Q96I85 54 aa6.03□□□□□ -1.44
SCARB2-209ENST00000638409 C8orf49Q96NF6 230 aa6.03□□□□□ -1.44
SCARB2-209ENST00000638409 TSNAXQ99598 290 aaKnown RBP6.03□□□□□ -1.44
SCARB2-209ENST00000638409 KIR2DL4Q99706 377 aa6.03□□□□□ -1.44
SCARB2-209ENST00000638409 TMEM100Q9NV29 134 aa6.03□□□□□ -1.44
SCARB2-209ENST00000638409 VSIG4Q9Y279 399 aa6.03□□□□□ -1.44
SCARB2-209ENST00000638409 V9GYS6 101 aa6.03□□□□□ -1.44
SCARB2-209ENST00000638409 VPS13CQ709C8 3753 aa6.03□□□□□ -1.44
SCARB2-209ENST00000638409 A0A0D9SG52 128 aa6.03□□□□□ -1.44
SCARB2-209ENST00000638409 SLC17A2O00624 439 aa6.03□□□□□ -1.44
SCARB2-209ENST00000638409 TAS2R19P59542 299 aa6.03□□□□□ -1.44
SCARB2-209ENST00000638409 SPIN3Q5JUX0 258 aa6.03□□□□□ -1.44
SCARB2-209ENST00000638409 AVPI1Q5T686 147 aa6.03□□□□□ -1.44
SCARB2-209ENST00000638409 TPTE2P1Q5T6R2 138 aa6.03□□□□□ -1.44
SCARB2-209ENST00000638409 C11orf87Q6NUJ2 197 aa6.03□□□□□ -1.44
SCARB2-209ENST00000638409 OR51A2Q8NGJ7 313 aa6.03□□□□□ -1.44
SCARB2-209ENST00000638409 DDB2Q92466 427 aa6.03□□□□□ -1.44
SCARB2-209ENST00000638409 RTTNQ86VV8 2226 aa6.03□□□□□ -1.44
SCARB2-209ENST00000638409 A0A0G2JLM5 398 aa6.02□□□□□ -1.45
SCARB2-209ENST00000638409 TMEM235A6NFC5 223 aa6.02□□□□□ -1.45
SCARB2-209ENST00000638409 LMX1BO60663 402 aa6.02□□□□□ -1.45
SCARB2-209ENST00000638409 USF1P22415 310 aaPredicted RBP6.02□□□□□ -1.45
SCARB2-209ENST00000638409 RND2P52198 227 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms