RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 LCN15Q6UWW0 184 aa9.82□□□□□ -0.84
CACNA1D-228ENST00000638120 MRPL41Q8IXM3 137 aaKnown RBP9.82□□□□□ -0.84
CACNA1D-228ENST00000638120 SVBPQ8N300 66 aa9.82□□□□□ -0.84
CACNA1D-228ENST00000638120 OR10G4Q8NGN3 311 aa9.82□□□□□ -0.84
CACNA1D-228ENST00000638120 OR10G9Q8NGN4 311 aa9.82□□□□□ -0.84
CACNA1D-228ENST00000638120 OR10G7Q8NGN6 311 aa9.82□□□□□ -0.84
CACNA1D-228ENST00000638120 MAP1LC3BQ9GZQ8 125 aa9.82□□□□□ -0.84
CACNA1D-228ENST00000638120 KCNIP2Q9NS61 270 aa9.82□□□□□ -0.84
CACNA1D-228ENST00000638120 IGLC7A0M8Q6 106 aa9.81□□□□□ -0.84
CACNA1D-228ENST00000638120 A1L4Q6 167 aa9.81□□□□□ -0.84
CACNA1D-228ENST00000638120 UBE2E1P51965 193 aa9.81□□□□□ -0.84
CACNA1D-228ENST00000638120 LGALS4P56470 323 aa9.81□□□□□ -0.84
CACNA1D-228ENST00000638120 CD69Q07108 199 aa9.81□□□□□ -0.84
CACNA1D-228ENST00000638120 SSX2Q16385 188 aa9.81□□□□□ -0.84
CACNA1D-228ENST00000638120 GUCA2BQ16661 112 aa9.81□□□□□ -0.84
CACNA1D-228ENST00000638120 ACOT6Q3I5F7 207 aaPredicted RBP9.81□□□□□ -0.84
CACNA1D-228ENST00000638120 ZNF506Q5JVG8 444 aa9.81□□□□□ -0.84
CACNA1D-228ENST00000638120 ATRAIDQ6UW56 229 aa9.81□□□□□ -0.84
CACNA1D-228ENST00000638120 RARRES2Q99969 163 aa9.81□□□□□ -0.84
CACNA1D-228ENST00000638120 FBXL15Q9H469 300 aa9.81□□□□□ -0.84
CACNA1D-228ENST00000638120 SLC25A22Q9H936 323 aa9.81□□□□□ -0.84
CACNA1D-228ENST00000638120 TBL2Q9Y4P3 447 aaKnown RBP9.81□□□□□ -0.84
CACNA1D-228ENST00000638120 MOSP00540 346 aa9.8□□□□□ -0.84
CACNA1D-228ENST00000638120 OR13C7P0DN81 318 aa9.8□□□□□ -0.84
CACNA1D-228ENST00000638120 PAX1P15863 534 aa9.8□□□□□ -0.84
CACNA1D-228ENST00000638120 SUB1P53999 127 aaKnown RBP eCLIP9.8□□□□□ -0.84
CACNA1D-228ENST00000638120 MMDQ15546 238 aa9.8□□□□□ -0.84
CACNA1D-228ENST00000638120 TMEM144Q7Z5S9 345 aa9.8□□□□□ -0.84
CACNA1D-228ENST00000638120 DYNAPQ8N1N2 210 aa9.8□□□□□ -0.84
CACNA1D-228ENST00000638120 RNASEH2CQ8TDP1 164 aaKnown RBP9.8□□□□□ -0.84
CACNA1D-228ENST00000638120 P2RX4Q99571 388 aa9.8□□□□□ -0.84
CACNA1D-228ENST00000638120 ACTR3CQ9C0K3 210 aaPredicted RBP9.8□□□□□ -0.84
CACNA1D-228ENST00000638120 SLC39A9Q9NUM3 307 aa9.8□□□□□ -0.84
CACNA1D-228ENST00000638120 PXMP4Q9Y6I8 212 aa9.8□□□□□ -0.84
CACNA1D-228ENST00000638120 IGHV4-30-2A0A087WSY4 118 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 SEC14L6B5MCN3 397 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 NBR2O15453 112 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 YIF1AO95070 293 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 NDUFA3O95167 84 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 PAX6P26367 422 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 GPX4P36969 197 aaPredicted RBP9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 FGF8P55075 233 aaPredicted RBP9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 SSBP2P81877 361 aaPredicted RBP9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 RAB31Q13636 194 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 HAGHQ16775 308 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 MIC13Q5XKP0 118 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 FAM122CQ6P4D5 195 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 ZNF114Q8NC26 417 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 NPBQ8NG41 125 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 CACNG8Q8WXS5 425 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 PERPQ96FX8 193 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 EAF1Q96JC9 268 aaPredicted RBP9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 SLC35B3Q9H1N7 401 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 LPAR2Q9HBW0 351 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 LOC102723971A0A1B0GUV8 181 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 CYB5BO43169 146 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 SNRNP70P08621 437 aaKnown RBP9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 RPL29P47914 159 aaKnown RBP9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 CDC34P49427 236 aaPredicted RBP9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 PMS2P11Q13670 270 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 GAMTQ14353 236 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 ICAM4Q14773 271 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 PLGLAQ15195 96 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 KHDC3LQ587J8 217 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 PVRIGQ6DKI7 326 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 SLC16A13Q7RTY0 426 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 OR2T10Q8NGZ9 312 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 C17orf50Q8WW18 174 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 RAB24Q969Q5 203 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 NKX6-2Q9C056 277 aaPredicted RBP9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 GNG13Q9P2W3 67 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 TACC2O95359 2948 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 ABCA2Q9BZC7 2435 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 NAV3Q8IVL0 2385 aa9.79□□□□□ -0.84
CACNA1D-228ENST00000638120 TEX22C9J3V5 150 aa9.78□□□□□ -0.84
CACNA1D-228ENST00000638120 FCN1O00602 326 aa9.78□□□□□ -0.84
CACNA1D-228ENST00000638120 EIF3GO75821 320 aaKnown RBP eCLIP9.78□□□□□ -0.84
CACNA1D-228ENST00000638120 HSPB1P04792 205 aaKnown RBP9.78□□□□□ -0.84
CACNA1D-228ENST00000638120 BCL2P10415 239 aa9.78□□□□□ -0.84
CACNA1D-228ENST00000638120 DSCR9P59020 149 aa9.78□□□□□ -0.84
CACNA1D-228ENST00000638120 B2MP61769 119 aa9.78□□□□□ -0.84
CACNA1D-228ENST00000638120 GNB1P62873 340 aa9.78□□□□□ -0.84
CACNA1D-228ENST00000638120 PAX8Q06710 450 aa9.78□□□□□ -0.84
CACNA1D-228ENST00000638120 EBI3Q14213 229 aa9.78□□□□□ -0.84
CACNA1D-228ENST00000638120 FBLN7Q53RD9 439 aa9.78□□□□□ -0.84
CACNA1D-228ENST00000638120 GCSAMLQ5JQS6 135 aa9.78□□□□□ -0.84
CACNA1D-228ENST00000638120 SSMEM1Q8WWF3 244 aa9.78□□□□□ -0.84
CACNA1D-228ENST00000638120 SRSF12Q8WXF0 261 aaKnown RBP9.78□□□□□ -0.84
CACNA1D-228ENST00000638120 NRGNQ92686 78 aa9.78□□□□□ -0.84
CACNA1D-228ENST00000638120 MALSU1Q96EH3 234 aa9.78□□□□□ -0.84
CACNA1D-228ENST00000638120 WNK2Q9Y3S1 2297 aa9.78□□□□□ -0.84
CACNA1D-228ENST00000638120 IGKV1OR2-108A0A075B7D4 117 aa9.77□□□□□ -0.84
CACNA1D-228ENST00000638120 SNAPINO95295 136 aa9.77□□□□□ -0.84
CACNA1D-228ENST00000638120 REG1AP05451 166 aa9.77□□□□□ -0.84
CACNA1D-228ENST00000638120 DEFA4P12838 97 aa9.77□□□□□ -0.84
CACNA1D-228ENST00000638120 AREGP15514 252 aa9.77□□□□□ -0.84
CACNA1D-228ENST00000638120 CD24P25063 80 aa9.77□□□□□ -0.84
CACNA1D-228ENST00000638120 PRR20EP86478 221 aa9.77□□□□□ -0.84
CACNA1D-228ENST00000638120 PRR20CP86479 221 aa9.77□□□□□ -0.84
CACNA1D-228ENST00000638120 PRR20DP86480 221 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms