RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 RGS13O14921 159 aa9.34□□□□□ -0.91
CLN6-223ENST00000637823 IFNA7P01567 189 aa9.34□□□□□ -0.91
CLN6-223ENST00000637823 IFNA4P05014 189 aa9.34□□□□□ -0.91
CLN6-223ENST00000637823 RNASE2P10153 161 aaKnown RBP9.34□□□□□ -0.91
CLN6-223ENST00000637823 TPT1P13693 172 aaKnown RBP9.34□□□□□ -0.91
CLN6-223ENST00000637823 IER3P46695 156 aa9.34□□□□□ -0.91
CLN6-223ENST00000637823 CX3CL1P78423 397 aa9.34□□□□□ -0.91
CLN6-223ENST00000637823 WT1-ASQ06250 92 aa9.34□□□□□ -0.91
CLN6-223ENST00000637823 SLC38A11Q08AI6 406 aa9.34□□□□□ -0.91
CLN6-223ENST00000637823 ZNF266Q14584 549 aa9.34□□□□□ -0.91
CLN6-223ENST00000637823 CLINT1Q14677 625 aa9.34□□□□□ -0.91
CLN6-223ENST00000637823 RPL7L1Q6DKI1 246 aaKnown RBP9.34□□□□□ -0.91
CLN6-223ENST00000637823 Q6YL49 198 aa9.34□□□□□ -0.91
CLN6-223ENST00000637823 ETV3LQ6ZN32 361 aa9.34□□□□□ -0.91
CLN6-223ENST00000637823 ZNF767PQ75MW2 155 aa9.34□□□□□ -0.91
CLN6-223ENST00000637823 TMEM219Q86XT9 240 aa9.34□□□□□ -0.91
CLN6-223ENST00000637823 BAP18Q8IXM2 172 aa9.34□□□□□ -0.91
CLN6-223ENST00000637823 C5orf56Q8N8D9 126 aa9.34□□□□□ -0.91
CLN6-223ENST00000637823 ZNF680Q8NEM1 530 aa9.34□□□□□ -0.91
CLN6-223ENST00000637823 OR5R1Q8NH85 324 aa9.34□□□□□ -0.91
CLN6-223ENST00000637823 TMEM170AQ8WVE7 144 aa9.34□□□□□ -0.91
CLN6-223ENST00000637823 ATP5SQ99766 215 aa9.34□□□□□ -0.91
CLN6-223ENST00000637823 ARV1Q9H2C2 271 aa9.34□□□□□ -0.91
CLN6-223ENST00000637823 MXRA5Q9NR99 2828 aa9.33□□□□□ -0.92
CLN6-223ENST00000637823 MDFIC2A0A1B0GVS7 189 aa9.33□□□□□ -0.92
CLN6-223ENST00000637823 CFDP00746 253 aaPredicted RBP9.33□□□□□ -0.92
CLN6-223ENST00000637823 IFNA5P01569 189 aa9.33□□□□□ -0.92
CLN6-223ENST00000637823 HNF1AP20823 631 aa9.33□□□□□ -0.92
CLN6-223ENST00000637823 SRP14P37108 136 aaKnown RBP9.33□□□□□ -0.92
CLN6-223ENST00000637823 LY6EQ16553 131 aa9.33□□□□□ -0.92
CLN6-223ENST00000637823 SPNS3Q6ZMD2 512 aa9.33□□□□□ -0.92
CLN6-223ENST00000637823 LILRB2Q8N423 598 aa9.33□□□□□ -0.92
CLN6-223ENST00000637823 ZNF114Q8NC26 417 aa9.33□□□□□ -0.92
CLN6-223ENST00000637823 SSMEM1Q8WWF3 244 aa9.33□□□□□ -0.92
CLN6-223ENST00000637823 C22orf15Q8WYQ4 148 aa9.33□□□□□ -0.92
CLN6-223ENST00000637823 ARPC1AQ92747 370 aa9.33□□□□□ -0.92
CLN6-223ENST00000637823 PHYHIPLQ96FC7 376 aa9.33□□□□□ -0.92
CLN6-223ENST00000637823 GGACTQ9BVM4 153 aa9.33□□□□□ -0.92
CLN6-223ENST00000637823 TMEM160Q9NX00 188 aa9.33□□□□□ -0.92
CLN6-223ENST00000637823 ACANP16112 2415 aa9.33□□□□□ -0.92
CLN6-223ENST00000637823 TLN2Q9Y4G6 2542 aa9.33□□□□□ -0.92
CLN6-223ENST00000637823 NOTCH2Q04721 2471 aa9.32□□□□□ -0.92
CLN6-223ENST00000637823 IGHV7-81A0A0B4J1V7 117 aa9.32□□□□□ -0.92
CLN6-223ENST00000637823 BTBD17A6NE02 478 aa9.32□□□□□ -0.92
CLN6-223ENST00000637823 PRSS46E5RG02 174 aa9.32□□□□□ -0.92
CLN6-223ENST00000637823 DLK1P80370 383 aa9.32□□□□□ -0.92
CLN6-223ENST00000637823 TUSC1Q2TAM9 212 aa9.32□□□□□ -0.92
CLN6-223ENST00000637823 EIF5AL1Q6IS14 154 aaKnown RBP9.32□□□□□ -0.92
CLN6-223ENST00000637823 SCGB1C1Q8TD33 95 aa9.32□□□□□ -0.92
CLN6-223ENST00000637823 RNASEH2CQ8TDP1 164 aaKnown RBP9.32□□□□□ -0.92
CLN6-223ENST00000637823 ABHD5Q8WTS1 349 aa9.32□□□□□ -0.92
CLN6-223ENST00000637823 P2RX4Q99571 388 aa9.32□□□□□ -0.92
CLN6-223ENST00000637823 GINS3Q9BRX5 216 aa9.32□□□□□ -0.92
CLN6-223ENST00000637823 TMEM147Q9BVK8 224 aa9.32□□□□□ -0.92
CLN6-223ENST00000637823 PARD6GQ9BYG4 376 aaPredicted RBP9.32□□□□□ -0.92
CLN6-223ENST00000637823 FNDC10F2Z333 226 aa9.31□□□□□ -0.92
CLN6-223ENST00000637823 IGHV4-59P01825 116 aa9.31□□□□□ -0.92
CLN6-223ENST00000637823 AMY1AP04745 511 aa9.31□□□□□ -0.92
CLN6-223ENST00000637823 REG1AP05451 166 aa9.31□□□□□ -0.92
CLN6-223ENST00000637823 EGR2P11161 476 aaPredicted RBP9.31□□□□□ -0.92
CLN6-223ENST00000637823 FOSL1P15407 271 aa9.31□□□□□ -0.92
CLN6-223ENST00000637823 AREGP15514 252 aa9.31□□□□□ -0.92
CLN6-223ENST00000637823 GPX4P36969 197 aaPredicted RBP9.31□□□□□ -0.92
CLN6-223ENST00000637823 EXOSC2Q13868 293 aaKnown RBP9.31□□□□□ -0.92
CLN6-223ENST00000637823 VWC2Q2TAL6 325 aa9.31□□□□□ -0.92
CLN6-223ENST00000637823 PVRIGQ6DKI7 326 aa9.31□□□□□ -0.92
CLN6-223ENST00000637823 OR1L6Q8NGR2 347 aa9.31□□□□□ -0.92
CLN6-223ENST00000637823 OR1P1Q8NH06 330 aa9.31□□□□□ -0.92
CLN6-223ENST00000637823 SCARB1Q8WTV0 552 aa9.31□□□□□ -0.92
CLN6-223ENST00000637823 TMEM68Q96MH6 324 aa9.31□□□□□ -0.92
CLN6-223ENST00000637823 ZNF48Q96MX3 618 aaPredicted RBP9.31□□□□□ -0.92
CLN6-223ENST00000637823 UQCC1Q9NVA1 299 aa9.31□□□□□ -0.92
CLN6-223ENST00000637823 UBQLN2Q9UHD9 624 aa9.31□□□□□ -0.92
CLN6-223ENST00000637823 NPIPB5A8MRT5 1133 aa9.3□□□□□ -0.92
CLN6-223ENST00000637823 TSPAN9O75954 239 aa9.3□□□□□ -0.92
CLN6-223ENST00000637823 CRYGCP07315 174 aa9.3□□□□□ -0.92
CLN6-223ENST00000637823 APELAP0DMC3 54 aa9.3□□□□□ -0.92
CLN6-223ENST00000637823 CTRB1P17538 263 aa9.3□□□□□ -0.92
CLN6-223ENST00000637823 SCGB2A2Q13296 93 aa9.3□□□□□ -0.92
CLN6-223ENST00000637823 CTRB2Q6GPI1 263 aa9.3□□□□□ -0.92
CLN6-223ENST00000637823 SLC25A24Q6NUK1 477 aa9.3□□□□□ -0.92
CLN6-223ENST00000637823 ALKAL2Q6UX46 152 aa9.3□□□□□ -0.92
CLN6-223ENST00000637823 IL17RELQ6ZVW7 336 aa9.3□□□□□ -0.92
CLN6-223ENST00000637823 TTC9CQ8N5M4 171 aa9.3□□□□□ -0.92
CLN6-223ENST00000637823 SGMS2Q8NHU3 365 aa9.3□□□□□ -0.92
CLN6-223ENST00000637823 CACNG8Q8WXS5 425 aa9.3□□□□□ -0.92
CLN6-223ENST00000637823 GNPNAT1Q96EK6 184 aaPredicted RBP9.3□□□□□ -0.92
CLN6-223ENST00000637823 HSPB9Q9BQS6 159 aa9.3□□□□□ -0.92
CLN6-223ENST00000637823 TMUB1Q9BVT8 246 aa9.3□□□□□ -0.92
CLN6-223ENST00000637823 F11RQ9Y624 299 aaKnown RBP9.3□□□□□ -0.92
CLN6-223ENST00000637823 TEP1Q99973 2627 aaKnown RBP9.29□□□□□ -0.92
CLN6-223ENST00000637823 CORTO00230 105 aa9.29□□□□□ -0.92
CLN6-223ENST00000637823 CYB5BO43169 146 aa9.29□□□□□ -0.92
CLN6-223ENST00000637823 LY6G6DO95868 133 aa9.29□□□□□ -0.92
CLN6-223ENST00000637823 SEC11BP0C7V7 166 aa9.29□□□□□ -0.92
CLN6-223ENST00000637823 CD99P14209 185 aa9.29□□□□□ -0.92
CLN6-223ENST00000637823 MDKP21741 143 aaPredicted RBP9.29□□□□□ -0.92
CLN6-223ENST00000637823 NDPQ00604 133 aa9.29□□□□□ -0.92
CLN6-223ENST00000637823 CD69Q07108 199 aa9.29□□□□□ -0.92
CLN6-223ENST00000637823 ASPHD1Q5U4P2 390 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms