RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 TMEM56Q96MV1 263 aa15□□□□□ -0.01
CLN6-222ENST00000637667 CHRDL1Q9BU40 450 aa15□□□□□ -0.01
CLN6-222ENST00000637667 DAZ1Q9NQZ3 744 aaKnown RBP15□□□□□ -0.01
CLN6-222ENST00000637667 TMEM14BQ9NUH8 114 aa15□□□□□ -0.01
CLN6-222ENST00000637667 LOC102724200A0A096LPH7 203 aaPredicted RBP14.99□□□□□ -0.01
CLN6-222ENST00000637667 DBX1A6NMT0 343 aa14.99□□□□□ -0.01
CLN6-222ENST00000637667 C15orf61A6NNL5 157 aa14.99□□□□□ -0.01
CLN6-222ENST00000637667 NDUFA4O00483 81 aa14.99□□□□□ -0.01
CLN6-222ENST00000637667 TBC1D26Q86UD7 250 aa14.99□□□□□ -0.01
CLN6-222ENST00000637667 LYSTQ99698 3801 aa14.99□□□□□ -0.01
CLN6-222ENST00000637667 SPAG8Q99932 426 aaPredicted RBP14.99□□□□□ -0.01
CLN6-222ENST00000637667 F8W735 103 aaPredicted RBP14.98□□□□□ -0.01
CLN6-222ENST00000637667 ELK1P19419 428 aa14.98□□□□□ -0.01
CLN6-222ENST00000637667 ADMP35318 185 aa14.98□□□□□ -0.01
CLN6-222ENST00000637667 UCP3P55916 312 aa14.98□□□□□ -0.01
CLN6-222ENST00000637667 SLC38A6Q8IZM9 456 aa14.98□□□□□ -0.01
CLN6-222ENST00000637667 OR2C3Q8N628 320 aa14.98□□□□□ -0.01
CLN6-222ENST00000637667 OR1P1Q8NH06 330 aa14.98□□□□□ -0.01
CLN6-222ENST00000637667 SEC22AQ96IW7 307 aa14.98□□□□□ -0.01
CLN6-222ENST00000637667 C20orf24Q9BUV8 137 aa14.98□□□□□ -0.01
CLN6-222ENST00000637667 TSPAN4O14817 238 aa14.97□□□□□ -0.01
CLN6-222ENST00000637667 HPGDSO60760 199 aa14.97□□□□□ -0.01
CLN6-222ENST00000637667 Q56UQ5 140 aa14.97□□□□□ -0.01
CLN6-222ENST00000637667 UBAC2Q8NBM4 344 aa14.97□□□□□ -0.01
CLN6-222ENST00000637667 OVOL2Q9BRP0 275 aa14.97□□□□□ -0.01
CLN6-222ENST00000637667 IGHV3OR16-8A0A075B7F1 116 aa14.96□□□□□ -0.01
CLN6-222ENST00000637667 IGKV1-39P01597 117 aa14.96□□□□□ -0.01
CLN6-222ENST00000637667 IGKV1D-39P04432 117 aa14.96□□□□□ -0.01
CLN6-222ENST00000637667 H2BFWTQ7Z2G1 175 aa14.96□□□□□ -0.01
CLN6-222ENST00000637667 OR4A16Q8NH70 328 aa14.96□□□□□ -0.01
CLN6-222ENST00000637667 K7EMT4 169 aa14.95□□□□□ -0.02
CLN6-222ENST00000637667 M0QYG6 137 aa14.95□□□□□ -0.02
CLN6-222ENST00000637667 RORCP51449 518 aa14.95□□□□□ -0.02
CLN6-222ENST00000637667 LAMTOR1Q6IAA8 161 aa14.95□□□□□ -0.02
CLN6-222ENST00000637667 MRGPRFQ96AM1 343 aa14.95□□□□□ -0.02
CLN6-222ENST00000637667 ZNF207O43670 478 aaKnown RBP14.94□□□□□ -0.02
CLN6-222ENST00000637667 JTBO76095 146 aa14.94□□□□□ -0.02
CLN6-222ENST00000637667 CTSGP08311 255 aa14.94□□□□□ -0.02
CLN6-222ENST00000637667 PRCDQ00LT1 54 aa14.94□□□□□ -0.02
CLN6-222ENST00000637667 MZT2AQ6P582 158 aa14.94□□□□□ -0.02
CLN6-222ENST00000637667 MISP3Q96FF7 219 aa14.94□□□□□ -0.02
CLN6-222ENST00000637667 UBQLN2Q9UHD9 624 aa14.94□□□□□ -0.02
CLN6-222ENST00000637667 C15orf62A8K5M9 175 aa14.93□□□□□ -0.02
CLN6-222ENST00000637667 FAM25AB3EWG3 89 aa14.93□□□□□ -0.02
CLN6-222ENST00000637667 FAM25CB3EWG5 89 aa14.93□□□□□ -0.02
CLN6-222ENST00000637667 FAM25GB3EWG6 89 aa14.93□□□□□ -0.02
CLN6-222ENST00000637667 I3L2K1 104 aa14.93□□□□□ -0.02
CLN6-222ENST00000637667 NUPL2O15504 423 aaKnown RBP14.93□□□□□ -0.02
CLN6-222ENST00000637667 RELQ04864 619 aaPredicted RBP14.93□□□□□ -0.02
CLN6-222ENST00000637667 RNASE12Q5GAN4 147 aaKnown RBP14.93□□□□□ -0.02
CLN6-222ENST00000637667 ZNF114Q8NC26 417 aa14.93□□□□□ -0.02
CLN6-222ENST00000637667 OR4C46A6NHA9 309 aa14.92□□□□□ -0.02
CLN6-222ENST00000637667 PGAM2P15259 253 aa14.92□□□□□ -0.02
CLN6-222ENST00000637667 FCGR2BP31994 310 aaPredicted RBP14.92□□□□□ -0.02
CLN6-222ENST00000637667 APOC4P55056 127 aa14.92□□□□□ -0.02
CLN6-222ENST00000637667 MFAP4P55083 255 aa14.92□□□□□ -0.02
CLN6-222ENST00000637667 RND3P61587 244 aa14.92□□□□□ -0.02
CLN6-222ENST00000637667 HSPE1P61604 102 aaKnown RBP14.92□□□□□ -0.02
CLN6-222ENST00000637667 ODF3L2Q3SX64 289 aa14.92□□□□□ -0.02
CLN6-222ENST00000637667 AP3S1Q92572 193 aa14.92□□□□□ -0.02
CLN6-222ENST00000637667 ZNF414Q96IQ9 312 aa14.92□□□□□ -0.02
CLN6-222ENST00000637667 TXN2Q99757 166 aa14.92□□□□□ -0.02
CLN6-222ENST00000637667 NAA50Q9GZZ1 169 aaKnown RBP14.92□□□□□ -0.02
CLN6-222ENST00000637667 KLK11Q9UBX7 282 aa14.92□□□□□ -0.02
CLN6-222ENST00000637667 SMPXQ9UHP9 88 aa14.92□□□□□ -0.02
CLN6-222ENST00000637667 PLECQ15149 4684 aaKnown RBP14.91□□□□□ -0.02
CLN6-222ENST00000637667 MT-CO2P00403 227 aa14.91□□□□□ -0.02
CLN6-222ENST00000637667 CTSDP07339 412 aaPredicted RBP14.91□□□□□ -0.02
CLN6-222ENST00000637667 RNASE10Q5GAN6 216 aaKnown RBP14.91□□□□□ -0.02
CLN6-222ENST00000637667 OR52I2Q8NH67 350 aa14.91□□□□□ -0.02
CLN6-222ENST00000637667 ZNF486Q96H40 463 aaPredicted RBP14.91□□□□□ -0.02
CLN6-222ENST00000637667 YIF1AO95070 293 aa14.9□□□□□ -0.02
CLN6-222ENST00000637667 GABARAPO95166 117 aa14.9□□□□□ -0.02
CLN6-222ENST00000637667 PI3P19957 117 aa14.9□□□□□ -0.02
CLN6-222ENST00000637667 PIGPP57054 158 aa14.9□□□□□ -0.02
CLN6-222ENST00000637667 ERHP84090 104 aaKnown RBP14.9□□□□□ -0.02
CLN6-222ENST00000637667 CTF1Q16619 201 aa14.9□□□□□ -0.02
CLN6-222ENST00000637667 IZUMO4Q1ZYL8 232 aa14.9□□□□□ -0.02
CLN6-222ENST00000637667 Q6ZWC4 215 aa14.9□□□□□ -0.02
CLN6-222ENST00000637667 LHFPL1Q86WI0 220 aa14.9□□□□□ -0.02
CLN6-222ENST00000637667 RHPN1-AS1Q9BWJ2 59 aa14.9□□□□□ -0.02
CLN6-222ENST00000637667 TP53TG1Q9Y2A0 90 aa14.9□□□□□ -0.02
CLN6-222ENST00000637667 IGHV7-4-1A0A0J9YVY3 117 aa14.89□□□□□ -0.03
CLN6-222ENST00000637667 UBE2CO00762 179 aa14.89□□□□□ -0.03
CLN6-222ENST00000637667 IGKV1-5P01602 117 aa14.89□□□□□ -0.03
CLN6-222ENST00000637667 IGHV3-48P01763 117 aa14.89□□□□□ -0.03
CLN6-222ENST00000637667 CD3DP04234 171 aa14.89□□□□□ -0.03
CLN6-222ENST00000637667 ZNF182P17025 639 aaPredicted RBP14.89□□□□□ -0.03
CLN6-222ENST00000637667 WFDC3Q8IUB2 231 aa14.89□□□□□ -0.03
CLN6-222ENST00000637667 ARRDC1Q8N5I2 433 aa14.89□□□□□ -0.03
CLN6-222ENST00000637667 TMEM116Q8NCL8 245 aa14.89□□□□□ -0.03
CLN6-222ENST00000637667 PINX1Q96BK5 328 aaKnown RBP14.89□□□□□ -0.03
CLN6-222ENST00000637667 OR10C1Q96KK4 312 aa14.89□□□□□ -0.03
CLN6-222ENST00000637667 RNF2Q99496 336 aa14.89□□□□□ -0.03
CLN6-222ENST00000637667 NXF2Q9GZY0 626 aaKnown RBP14.89□□□□□ -0.03
CLN6-222ENST00000637667 EXTL2Q9UBQ6 330 aa14.89□□□□□ -0.03
CLN6-222ENST00000637667 MTFP1Q9UDX5 166 aa14.89□□□□□ -0.03
CLN6-222ENST00000637667 KIR2DL5BA0A0G2JN68 375 aa14.88□□□□□ -0.03
CLN6-222ENST00000637667 KIR2DL5BA0A0G2JPC4 375 aa14.88□□□□□ -0.03
CLN6-222ENST00000637667 CHEK1O14757 476 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms