RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 PVRIGQ6DKI7 326 aa10.57□□□□□ -0.72
LINC00643-207ENST00000637212 TMEM14EPQ6UXP3 125 aa10.57□□□□□ -0.72
LINC00643-207ENST00000637212 TMEM252Q8N6L7 170 aa10.57□□□□□ -0.72
LINC00643-207ENST00000637212 ZNF114Q8NC26 417 aa10.57□□□□□ -0.72
LINC00643-207ENST00000637212 GRPEL2Q8TAA5 225 aa10.57□□□□□ -0.72
LINC00643-207ENST00000637212 MFFQ9GZY8 342 aa10.57□□□□□ -0.72
LINC00643-207ENST00000637212 HIVEP2P31629 2446 aa10.57□□□□□ -0.72
LINC00643-207ENST00000637212 SVEP1Q4LDE5 3571 aa10.56□□□□□ -0.72
LINC00643-207ENST00000637212 FAM24AA6NFZ4 105 aa10.56□□□□□ -0.72
LINC00643-207ENST00000637212 NPIPB5A8MRT5 1133 aa10.56□□□□□ -0.72
LINC00643-207ENST00000637212 TRIM77I1YAP6 450 aa10.56□□□□□ -0.72
LINC00643-207ENST00000637212 RNASE1P07998 156 aaKnown RBP10.56□□□□□ -0.72
LINC00643-207ENST00000637212 RAB11AP62491 216 aa10.56□□□□□ -0.72
LINC00643-207ENST00000637212 BAXQ07812 192 aa10.56□□□□□ -0.72
LINC00643-207ENST00000637212 SLC35E3Q7Z769 313 aa10.56□□□□□ -0.72
LINC00643-207ENST00000637212 Q8N2B8 174 aa10.56□□□□□ -0.72
LINC00643-207ENST00000637212 SLC24A4Q8NFF2 622 aa10.56□□□□□ -0.72
LINC00643-207ENST00000637212 OR1P1Q8NH06 330 aa10.56□□□□□ -0.72
LINC00643-207ENST00000637212 ABHD5Q8WTS1 349 aa10.56□□□□□ -0.72
LINC00643-207ENST00000637212 ESM1Q9NQ30 184 aa10.56□□□□□ -0.72
LINC00643-207ENST00000637212 LINC01548A6NM66 108 aa10.55□□□□□ -0.72
LINC00643-207ENST00000637212 C15orf62A8K5M9 175 aa10.55□□□□□ -0.72
LINC00643-207ENST00000637212 AP4M1O00189 453 aa10.55□□□□□ -0.72
LINC00643-207ENST00000637212 ARPC5O15511 151 aa10.55□□□□□ -0.72
LINC00643-207ENST00000637212 CYB5BO43169 146 aa10.55□□□□□ -0.72
LINC00643-207ENST00000637212 RNASE2P10153 161 aaKnown RBP10.55□□□□□ -0.72
LINC00643-207ENST00000637212 AREGP15514 252 aa10.55□□□□□ -0.72
LINC00643-207ENST00000637212 CTRB1P17538 263 aa10.55□□□□□ -0.72
LINC00643-207ENST00000637212 NPY1RP25929 384 aa10.55□□□□□ -0.72
LINC00643-207ENST00000637212 SULT1A1P50225 295 aa10.55□□□□□ -0.72
LINC00643-207ENST00000637212 NDPQ00604 133 aa10.55□□□□□ -0.72
LINC00643-207ENST00000637212 ZNF345Q14585 488 aa10.55□□□□□ -0.72
LINC00643-207ENST00000637212 KLK9Q2XQG4 91 aa10.55□□□□□ -0.72
LINC00643-207ENST00000637212 C9orf152Q5JTZ5 239 aa10.55□□□□□ -0.72
LINC00643-207ENST00000637212 ASPHD1Q5U4P2 390 aa10.55□□□□□ -0.72
LINC00643-207ENST00000637212 CTRB2Q6GPI1 263 aa10.55□□□□□ -0.72
LINC00643-207ENST00000637212 STX12Q86Y82 276 aa10.55□□□□□ -0.72
LINC00643-207ENST00000637212 KCNRGQ8N5I3 272 aa10.55□□□□□ -0.72
LINC00643-207ENST00000637212 LFNGQ8NES3 379 aa10.55□□□□□ -0.72
LINC00643-207ENST00000637212 OR4C12Q96R67 309 aa10.55□□□□□ -0.72
LINC00643-207ENST00000637212 P2RX4Q99571 388 aa10.55□□□□□ -0.72
LINC00643-207ENST00000637212 PARP11Q9NR21 331 aa10.55□□□□□ -0.72
LINC00643-207ENST00000637212 KLK9Q9UKQ9 250 aa10.55□□□□□ -0.72
LINC00643-207ENST00000637212 TRAV41A0A0B4J266 112 aa10.54□□□□□ -0.72
LINC00643-207ENST00000637212 IGSF23A1L1A6 192 aa10.54□□□□□ -0.72
LINC00643-207ENST00000637212 RNF222A6NCQ9 220 aa10.54□□□□□ -0.72
LINC00643-207ENST00000637212 SH2D7A6NKC9 451 aaPredicted RBP10.54□□□□□ -0.72
LINC00643-207ENST00000637212 TAAR5O14804 337 aa10.54□□□□□ -0.72
LINC00643-207ENST00000637212 ATP6V0E1O15342 81 aa10.54□□□□□ -0.72
LINC00643-207ENST00000637212 TCF21O43680 179 aa10.54□□□□□ -0.72
LINC00643-207ENST00000637212 BRI3O95415 125 aa10.54□□□□□ -0.72
LINC00643-207ENST00000637212 CRYBA1P05813 215 aa10.54□□□□□ -0.72
LINC00643-207ENST00000637212 OR8U8P0C7N1 319 aa10.54□□□□□ -0.72
LINC00643-207ENST00000637212 C4BPBP20851 252 aa10.54□□□□□ -0.72
LINC00643-207ENST00000637212 S100A11P31949 105 aa10.54□□□□□ -0.72
LINC00643-207ENST00000637212 EIF2B2P49770 351 aaKnown RBP10.54□□□□□ -0.72
LINC00643-207ENST00000637212 UBA52P62987 128 aaKnown RBP10.54□□□□□ -0.72
LINC00643-207ENST00000637212 EWSR1Q01844 656 aaKnown RBP eCLIP10.54□□□□□ -0.72
LINC00643-207ENST00000637212 LGALSLQ3ZCW2 172 aaPredicted RBP10.54□□□□□ -0.72
LINC00643-207ENST00000637212 C19orf54Q5BKX5 351 aa10.54□□□□□ -0.72
LINC00643-207ENST00000637212 UNQ5815/PRO19632Q6UWF5 114 aa10.54□□□□□ -0.72
LINC00643-207ENST00000637212 OR10P1Q8NGE3 313 aa10.54□□□□□ -0.72
LINC00643-207ENST00000637212 RNASEH2CQ8TDP1 164 aaKnown RBP10.54□□□□□ -0.72
LINC00643-207ENST00000637212 FAM103A1Q9BTL3 118 aaKnown RBP10.54□□□□□ -0.72
LINC00643-207ENST00000637212 GGACTQ9BVM4 153 aa10.54□□□□□ -0.72
LINC00643-207ENST00000637212 GON7Q9BXV9 100 aa10.54□□□□□ -0.72
LINC00643-207ENST00000637212 WNT10AQ9GZT5 417 aa10.54□□□□□ -0.72
LINC00643-207ENST00000637212 ZC4H2Q9NQZ6 224 aa10.54□□□□□ -0.72
LINC00643-207ENST00000637212 FBXO7Q9Y3I1 522 aa10.54□□□□□ -0.72
LINC00643-207ENST00000637212 F11RQ9Y624 299 aaKnown RBP10.54□□□□□ -0.72
LINC00643-207ENST00000637212 FAM181BA6NEQ2 426 aa10.53□□□□□ -0.72
LINC00643-207ENST00000637212 PMS2P5A8MQ11 134 aa10.53□□□□□ -0.72
LINC00643-207ENST00000637212 H3BP45 60 aa10.53□□□□□ -0.72
LINC00643-207ENST00000637212 BOLA2-SMG1P6H3BVE0 249 aa10.53□□□□□ -0.72
LINC00643-207ENST00000637212 CORTO00230 105 aa10.53□□□□□ -0.72
LINC00643-207ENST00000637212 FBXO24O75426 580 aa10.53□□□□□ -0.72
LINC00643-207ENST00000637212 IFNA4P05014 189 aa10.53□□□□□ -0.72
LINC00643-207ENST00000637212 HIST1H1BP16401 226 aaKnown RBP10.53□□□□□ -0.72
LINC00643-207ENST00000637212 CXCL2P19875 107 aa10.53□□□□□ -0.72
LINC00643-207ENST00000637212 GPX4P36969 197 aaPredicted RBP10.53□□□□□ -0.72
LINC00643-207ENST00000637212 HBG1P69891 147 aa10.53□□□□□ -0.72
LINC00643-207ENST00000637212 HBG2P69892 147 aa10.53□□□□□ -0.72
LINC00643-207ENST00000637212 NHLH2Q02577 135 aa10.53□□□□□ -0.72
LINC00643-207ENST00000637212 ATP6V1FQ16864 119 aa10.53□□□□□ -0.72
LINC00643-207ENST00000637212 ETV3LQ6ZN32 361 aa10.53□□□□□ -0.72
LINC00643-207ENST00000637212 Q6ZS46 218 aa10.53□□□□□ -0.72
LINC00643-207ENST00000637212 STPG2Q8N412 459 aa10.53□□□□□ -0.72
LINC00643-207ENST00000637212 C9orf62Q8N4C0 152 aa10.53□□□□□ -0.72
LINC00643-207ENST00000637212 FAM110DQ8TAY7 271 aaPredicted RBP10.53□□□□□ -0.72
LINC00643-207ENST00000637212 TMEM170AQ8WVE7 144 aa10.53□□□□□ -0.72
LINC00643-207ENST00000637212 CACNG8Q8WXS5 425 aa10.53□□□□□ -0.72
LINC00643-207ENST00000637212 PINX1Q96BK5 328 aaKnown RBP10.53□□□□□ -0.72
LINC00643-207ENST00000637212 DUX5Q96PT3 197 aa10.53□□□□□ -0.72
LINC00643-207ENST00000637212 ZNF702PQ9H963 129 aa10.53□□□□□ -0.72
LINC00643-207ENST00000637212 HSPB11Q9Y547 144 aa10.53□□□□□ -0.72
LINC00643-207ENST00000637212 ANK3Q12955 4377 aaKnown RBP10.53□□□□□ -0.72
LINC00643-207ENST00000637212 TLN2Q9Y4G6 2542 aa10.52□□□□□ -0.72
LINC00643-207ENST00000637212 METTL15P1P0C7V9 234 aa10.52□□□□□ -0.73
LINC00643-207ENST00000637212 DEFA4P12838 97 aa10.52□□□□□ -0.73
LINC00643-207ENST00000637212 AP2S1P53680 142 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms