RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 IL19Q9UHD0 177 aa11.91□□□□□ -0.5
CLN6-215ENST00000636674 OR51B2Q9Y5P1 312 aa11.91□□□□□ -0.5
CLN6-215ENST00000636674 ACACBO00763 2458 aa11.91□□□□□ -0.5
CLN6-215ENST00000636674 CHD8Q9HCK8 2581 aa11.91□□□□□ -0.5
CLN6-215ENST00000636674 DSCAMO60469 2012 aa11.91□□□□□ -0.5
CLN6-215ENST00000636674 IGLV3-9A0A075B6K5 115 aa11.91□□□□□ -0.5
CLN6-215ENST00000636674 TCAPO15273 167 aa11.91□□□□□ -0.5
CLN6-215ENST00000636674 SERF1AO75920 110 aa11.91□□□□□ -0.5
CLN6-215ENST00000636674 GLRXP35754 106 aa11.91□□□□□ -0.5
CLN6-215ENST00000636674 RPL19P84098 196 aaKnown RBP11.91□□□□□ -0.5
CLN6-215ENST00000636674 KRTCAP3Q53RY4 240 aa11.91□□□□□ -0.5
CLN6-215ENST00000636674 SPRNQ5BIV9 151 aa11.91□□□□□ -0.5
CLN6-215ENST00000636674 PQLC2Q6ZP29 291 aa11.91□□□□□ -0.5
CLN6-215ENST00000636674 NABP2Q9BQ15 211 aa11.91□□□□□ -0.5
CLN6-215ENST00000636674 PLEKHA3Q9HB20 300 aa11.91□□□□□ -0.5
CLN6-215ENST00000636674 OSTCQ9NRP0 149 aa11.91□□□□□ -0.5
CLN6-215ENST00000636674 TECRQ9NZ01 308 aaKnown RBP11.91□□□□□ -0.5
CLN6-215ENST00000636674 CELSR3Q9NYQ7 3312 aa11.9□□□□□ -0.5
CLN6-215ENST00000636674 MBD3L4A6NDZ8 208 aaPredicted RBP11.9□□□□□ -0.5
CLN6-215ENST00000636674 MBD3L3A6NE82 208 aaPredicted RBP11.9□□□□□ -0.5
CLN6-215ENST00000636674 MBD3L5A6NJ08 208 aaPredicted RBP11.9□□□□□ -0.5
CLN6-215ENST00000636674 OR5G3P0C626 314 aa11.9□□□□□ -0.5
CLN6-215ENST00000636674 GNG4P50150 75 aa11.9□□□□□ -0.5
CLN6-215ENST00000636674 KLF3P57682 345 aaPredicted RBP11.9□□□□□ -0.5
CLN6-215ENST00000636674 C2orf83Q53S99 150 aa11.9□□□□□ -0.5
CLN6-215ENST00000636674 CENPWQ5EE01 88 aa11.9□□□□□ -0.5
CLN6-215ENST00000636674 WDR73Q6P4I2 378 aa11.9□□□□□ -0.5
CLN6-215ENST00000636674 MBD3L2Q8NHZ7 208 aaPredicted RBP11.9□□□□□ -0.5
CLN6-215ENST00000636674 MSRB2Q9Y3D2 182 aa11.9□□□□□ -0.5
CLN6-215ENST00000636674 UPK2O00526 184 aa11.89□□□□□ -0.51
CLN6-215ENST00000636674 FCN1O00602 326 aa11.89□□□□□ -0.51
CLN6-215ENST00000636674 CCL11P51671 97 aa11.89□□□□□ -0.51
CLN6-215ENST00000636674 CX3CL1P78423 397 aa11.89□□□□□ -0.51
CLN6-215ENST00000636674 PSG5Q15238 335 aa11.89□□□□□ -0.51
CLN6-215ENST00000636674 STUMQ69YW2 141 aa11.89□□□□□ -0.51
CLN6-215ENST00000636674 LEAP2Q969E1 77 aa11.89□□□□□ -0.51
CLN6-215ENST00000636674 ZNF503Q96F45 646 aa11.89□□□□□ -0.51
CLN6-215ENST00000636674 HELTA6NFD8 242 aa11.89□□□□□ -0.51
CLN6-215ENST00000636674 ZNF705FA8MVS1 300 aaPredicted RBP11.89□□□□□ -0.51
CLN6-215ENST00000636674 SNURFLB1AK76 121 aa11.89□□□□□ -0.51
CLN6-215ENST00000636674 J3QR06 171 aa11.89□□□□□ -0.51
CLN6-215ENST00000636674 M0QZK8 103 aa11.89□□□□□ -0.51
CLN6-215ENST00000636674 NKX2-8O15522 239 aa11.89□□□□□ -0.51
CLN6-215ENST00000636674 ZNF705DP0CH99 300 aaPredicted RBP11.89□□□□□ -0.51
CLN6-215ENST00000636674 ZNF705BP0CI00 300 aaPredicted RBP11.89□□□□□ -0.51
CLN6-215ENST00000636674 TDGF1P3P51864 188 aa11.89□□□□□ -0.51
CLN6-215ENST00000636674 TIMM23BQ5SRD1 257 aa11.89□□□□□ -0.51
CLN6-215ENST00000636674 LYG1Q8N1E2 194 aa11.89□□□□□ -0.51
CLN6-215ENST00000636674 OR1L8Q8NGR8 309 aa11.89□□□□□ -0.51
CLN6-215ENST00000636674 ITLN1Q8WWA0 313 aa11.89□□□□□ -0.51
CLN6-215ENST00000636674 IER3P46695 156 aa11.88□□□□□ -0.51
CLN6-215ENST00000636674 TAS2R45P59539 299 aa11.88□□□□□ -0.51
CLN6-215ENST00000636674 TOMM20LQ6UXN7 152 aa11.88□□□□□ -0.51
CLN6-215ENST00000636674 OR5AU1Q8NGC0 362 aa11.88□□□□□ -0.51
CLN6-215ENST00000636674 BET1LQ9NYM9 111 aa11.88□□□□□ -0.51
CLN6-215ENST00000636674 RAI1Q7Z5J4 1906 aaPredicted RBP11.88□□□□□ -0.51
CLN6-215ENST00000636674 IGKV1OR2-108A0A075B7D4 117 aa11.87□□□□□ -0.51
CLN6-215ENST00000636674 A0A1W2PRE2 83 aa11.87□□□□□ -0.51
CLN6-215ENST00000636674 ISLRO14498 428 aa11.87□□□□□ -0.51
CLN6-215ENST00000636674 CRYBB3P26998 211 aa11.87□□□□□ -0.51
CLN6-215ENST00000636674 ZNF124Q15973 351 aa11.87□□□□□ -0.51
CLN6-215ENST00000636674 TMEM183BQ1AE95 376 aa11.87□□□□□ -0.51
CLN6-215ENST00000636674 OR10J3Q5JRS4 329 aa11.87□□□□□ -0.51
CLN6-215ENST00000636674 SLC25A48Q6ZT89 311 aaKnown RBP11.87□□□□□ -0.51
CLN6-215ENST00000636674 SEM1Q6ZVN7 128 aa11.87□□□□□ -0.51
CLN6-215ENST00000636674 OR8I2Q8N0Y5 310 aa11.87□□□□□ -0.51
CLN6-215ENST00000636674 OR5B3Q8NH48 314 aa11.87□□□□□ -0.51
CLN6-215ENST00000636674 HSPB9Q9BQS6 159 aa11.87□□□□□ -0.51
CLN6-215ENST00000636674 MRPL32Q9BYC8 188 aaKnown RBP11.87□□□□□ -0.51
CLN6-215ENST00000636674 RNF7Q9UBF6 113 aa11.87□□□□□ -0.51
CLN6-215ENST00000636674 AKAP13Q12802 2813 aa11.87□□□□□ -0.51
CLN6-215ENST00000636674 GGTLC3B5MD39 225 aa11.87□□□□□ -0.51
CLN6-215ENST00000636674 ACTL6BO94805 426 aa11.87□□□□□ -0.51
CLN6-215ENST00000636674 MYOD1P15172 320 aa11.87□□□□□ -0.51
CLN6-215ENST00000636674 ZNF83P51522 516 aa11.87□□□□□ -0.51
CLN6-215ENST00000636674 OR5I1Q13606 314 aa11.87□□□□□ -0.51
CLN6-215ENST00000636674 TIGITQ495A1 244 aa11.87□□□□□ -0.51
CLN6-215ENST00000636674 BAGE3Q86Y29 109 aa11.87□□□□□ -0.51
CLN6-215ENST00000636674 BAGE2Q86Y30 109 aa11.87□□□□□ -0.51
CLN6-215ENST00000636674 ST6GALNAC3Q8NDV1 305 aa11.87□□□□□ -0.51
CLN6-215ENST00000636674 IGF2BP2-AS1Q96M15 143 aa11.87□□□□□ -0.51
CLN6-215ENST00000636674 GAFA1Q96PS6 74 aa11.87□□□□□ -0.51
CLN6-215ENST00000636674 MAP1BP46821 2468 aaKnown RBP11.86□□□□□ -0.51
CLN6-215ENST00000636674 URB1O60287 2271 aaKnown RBP11.86□□□□□ -0.51
CLN6-215ENST00000636674 INS-IGF2F8WCM5 200 aa11.86□□□□□ -0.51
CLN6-215ENST00000636674 SPRY3O43610 288 aa11.86□□□□□ -0.51
CLN6-215ENST00000636674 CT45A6P0DMU7 189 aa11.86□□□□□ -0.51
CLN6-215ENST00000636674 CT45A5P0DMU8 189 aa11.86□□□□□ -0.51
CLN6-215ENST00000636674 CT45A7P0DMV0 189 aa11.86□□□□□ -0.51
CLN6-215ENST00000636674 RNASE2P10153 161 aaKnown RBP11.86□□□□□ -0.51
CLN6-215ENST00000636674 COMPP49747 757 aaPredicted RBP11.86□□□□□ -0.51
CLN6-215ENST00000636674 TMEM136Q6ZRR5 245 aa11.86□□□□□ -0.51
CLN6-215ENST00000636674 MIEN1Q9BRT3 115 aa11.86□□□□□ -0.51
CLN6-215ENST00000636674 SLC35D1Q9NTN3 355 aa11.86□□□□□ -0.51
CLN6-215ENST00000636674 RPUSD1Q9UJJ7 312 aaKnown RBP11.86□□□□□ -0.51
CLN6-215ENST00000636674 TEX50A0A1B0GTY4 177 aa11.86□□□□□ -0.51
CLN6-215ENST00000636674 M0R1B8 84 aa11.86□□□□□ -0.51
CLN6-215ENST00000636674 IGLV2-8P01709 118 aa11.86□□□□□ -0.51
CLN6-215ENST00000636674 COL8A2P25067 703 aa11.86□□□□□ -0.51
CLN6-215ENST00000636674 PPOXP50336 477 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms