RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 GAR1Q9NY12 217 aaKnown RBP13.47□□□□□ -0.25
PNKP-225ENST00000636214 RBMY1BA6NDE4 496 aaKnown RBP13.46□□□□□ -0.25
PNKP-225ENST00000636214 RBMY1EA6NEQ0 496 aaKnown RBP13.46□□□□□ -0.25
PNKP-225ENST00000636214 C15orf61A6NNL5 157 aa13.46□□□□□ -0.25
PNKP-225ENST00000636214 RBMY1DP0C7P1 496 aaKnown RBP13.46□□□□□ -0.25
PNKP-225ENST00000636214 RNASE12Q5GAN4 147 aaKnown RBP13.46□□□□□ -0.25
PNKP-225ENST00000636214 LINC00322Q6ZN03 302 aaPredicted RBP13.46□□□□□ -0.25
PNKP-225ENST00000636214 TENM2Q9NT68 2774 aa13.45□□□□□ -0.26
PNKP-225ENST00000636214 NDUFA4O00483 81 aa13.45□□□□□ -0.26
PNKP-225ENST00000636214 C8orf88P0DMB2 117 aa13.45□□□□□ -0.26
PNKP-225ENST00000636214 UCP3P55916 312 aa13.45□□□□□ -0.26
PNKP-225ENST00000636214 RNASE10Q5GAN6 216 aaKnown RBP13.45□□□□□ -0.26
PNKP-225ENST00000636214 OR1P1Q8NH06 330 aa13.45□□□□□ -0.26
PNKP-225ENST00000636214 GGTLC1Q9BX51 225 aa13.45□□□□□ -0.26
PNKP-225ENST00000636214 TMEM14BQ9NUH8 114 aa13.45□□□□□ -0.26
PNKP-225ENST00000636214 LOC102724200A0A096LPH7 203 aaPredicted RBP13.44□□□□□ -0.26
PNKP-225ENST00000636214 M0QYG6 137 aa13.44□□□□□ -0.26
PNKP-225ENST00000636214 NUPL2O15504 423 aaKnown RBP13.44□□□□□ -0.26
PNKP-225ENST00000636214 ATG12O94817 140 aa13.44□□□□□ -0.26
PNKP-225ENST00000636214 RELQ04864 619 aaPredicted RBP13.44□□□□□ -0.26
PNKP-225ENST00000636214 OR2C3Q8N628 320 aa13.44□□□□□ -0.26
PNKP-225ENST00000636214 SCARB1Q8WTV0 552 aa13.44□□□□□ -0.26
PNKP-225ENST00000636214 C15orf40Q8WUR7 153 aa13.44□□□□□ -0.26
PNKP-225ENST00000636214 MISP3Q96FF7 219 aa13.44□□□□□ -0.26
PNKP-225ENST00000636214 SPAG8Q99932 426 aaPredicted RBP13.44□□□□□ -0.26
PNKP-225ENST00000636214 C5orf66Q9H5L9 145 aa13.44□□□□□ -0.26
PNKP-225ENST00000636214 LCE6AA0A183 80 aa13.43□□□□□ -0.26
PNKP-225ENST00000636214 ZNF182P17025 639 aaPredicted RBP13.43□□□□□ -0.26
PNKP-225ENST00000636214 ERHP84090 104 aaKnown RBP13.43□□□□□ -0.26
PNKP-225ENST00000636214 MRGPRFQ96AM1 343 aa13.43□□□□□ -0.26
PNKP-225ENST00000636214 ZNF486Q96H40 463 aaPredicted RBP13.43□□□□□ -0.26
PNKP-225ENST00000636214 SEC22AQ96IW7 307 aa13.43□□□□□ -0.26
PNKP-225ENST00000636214 STARD9Q9P2P6 4700 aa13.43□□□□□ -0.26
PNKP-225ENST00000636214 EXTL2Q9UBQ6 330 aa13.43□□□□□ -0.26
PNKP-225ENST00000636214 TBPP20226 339 aa13.42□□□□□ -0.26
PNKP-225ENST00000636214 AKR1C2P52895 323 aa13.42□□□□□ -0.26
PNKP-225ENST00000636214 MFAP2P55001 183 aa13.42□□□□□ -0.26
PNKP-225ENST00000636214 PDCD10Q9BUL8 212 aa13.42□□□□□ -0.26
PNKP-225ENST00000636214 DYNC2H1Q8NCM8 4307 aaKnown RBP13.41□□□□□ -0.26
PNKP-225ENST00000636214 RYR2Q92736 4967 aa13.41□□□□□ -0.26
PNKP-225ENST00000636214 OR4C46A6NHA9 309 aa13.41□□□□□ -0.26
PNKP-225ENST00000636214 K7EIM0 57 aa13.41□□□□□ -0.26
PNKP-225ENST00000636214 TSPAN4O14817 238 aa13.41□□□□□ -0.26
PNKP-225ENST00000636214 JTBO76095 146 aa13.41□□□□□ -0.26
PNKP-225ENST00000636214 YIF1AO95070 293 aa13.41□□□□□ -0.26
PNKP-225ENST00000636214 GABARAPO95166 117 aa13.41□□□□□ -0.26
PNKP-225ENST00000636214 MFAP4P55083 255 aa13.41□□□□□ -0.26
PNKP-225ENST00000636214 PRCDQ00LT1 54 aa13.41□□□□□ -0.26
PNKP-225ENST00000636214 ARRDC1Q8N5I2 433 aa13.41□□□□□ -0.26
PNKP-225ENST00000636214 SLC35G3Q8N808 338 aa13.41□□□□□ -0.26
PNKP-225ENST00000636214 CCDC71LQ8N9Z2 235 aa13.41□□□□□ -0.26
PNKP-225ENST00000636214 CHRDL1Q9BU40 450 aa13.41□□□□□ -0.26
PNKP-225ENST00000636214 COPZ2Q9P299 210 aa13.41□□□□□ -0.26
PNKP-225ENST00000636214 DBX1A6NMT0 343 aa13.4□□□□□ -0.26
PNKP-225ENST00000636214 K7EMT4 169 aa13.4□□□□□ -0.26
PNKP-225ENST00000636214 GNG7O60262 68 aa13.4□□□□□ -0.26
PNKP-225ENST00000636214 SNCAP37840 140 aa13.4□□□□□ -0.26
PNKP-225ENST00000636214 PPP5CP53041 499 aa13.4□□□□□ -0.26
PNKP-225ENST00000636214 APOC4P55056 127 aa13.4□□□□□ -0.26
PNKP-225ENST00000636214 PIGPP57054 158 aa13.4□□□□□ -0.26
PNKP-225ENST00000636214 RND3P61587 244 aa13.4□□□□□ -0.26
PNKP-225ENST00000636214 HSPE1P61604 102 aaKnown RBP13.4□□□□□ -0.26
PNKP-225ENST00000636214 TRIM16LQ309B1 348 aa13.4□□□□□ -0.26
PNKP-225ENST00000636214 GPR107Q5VW38 600 aa13.4□□□□□ -0.26
PNKP-225ENST00000636214 OR52I2Q8NH67 350 aa13.4□□□□□ -0.26
PNKP-225ENST00000636214 RNASE11Q8TAA1 199 aaKnown RBP13.4□□□□□ -0.26
PNKP-225ENST00000636214 ZFAND1Q8TCF1 268 aa13.4□□□□□ -0.26
PNKP-225ENST00000636214 PINX1Q96BK5 328 aaKnown RBP13.4□□□□□ -0.26
PNKP-225ENST00000636214 NAA50Q9GZZ1 169 aaKnown RBP13.4□□□□□ -0.26
PNKP-225ENST00000636214 IGHV3OR16-8A0A075B7F1 116 aa13.39□□□□□ -0.27
PNKP-225ENST00000636214 C15orf62A8K5M9 175 aa13.39□□□□□ -0.27
PNKP-225ENST00000636214 RGS5O15539 181 aa13.39□□□□□ -0.27
PNKP-225ENST00000636214 ZNF207O43670 478 aaKnown RBP13.39□□□□□ -0.27
PNKP-225ENST00000636214 CD3DP04234 171 aa13.39□□□□□ -0.27
PNKP-225ENST00000636214 PI3P19957 117 aa13.39□□□□□ -0.27
PNKP-225ENST00000636214 BMI1P35226 326 aa13.39□□□□□ -0.27
PNKP-225ENST00000636214 SCGB2B2Q4G0G5 96 aa13.39□□□□□ -0.27
PNKP-225ENST00000636214 GPR141Q7Z602 305 aa13.39□□□□□ -0.27
PNKP-225ENST00000636214 TXN2Q99757 166 aa13.39□□□□□ -0.27
PNKP-225ENST00000636214 ENY2Q9NPA8 101 aa13.39□□□□□ -0.27
PNKP-225ENST00000636214 KLK11Q9UBX7 282 aa13.39□□□□□ -0.27
PNKP-225ENST00000636214 MTFP1Q9UDX5 166 aa13.39□□□□□ -0.27
PNKP-225ENST00000636214 UBQLN2Q9UHD9 624 aa13.39□□□□□ -0.27
PNKP-225ENST00000636214 CSMD3Q7Z407 3707 aa13.38□□□□□ -0.27
PNKP-225ENST00000636214 MT-CO2P00403 227 aa13.38□□□□□ -0.27
PNKP-225ENST00000636214 IFNA17P01571 189 aa13.38□□□□□ -0.27
PNKP-225ENST00000636214 IGKV1-39P01597 117 aa13.38□□□□□ -0.27
PNKP-225ENST00000636214 IGKV1D-39P04432 117 aa13.38□□□□□ -0.27
PNKP-225ENST00000636214 ADMP35318 185 aa13.38□□□□□ -0.27
PNKP-225ENST00000636214 TAS2R19P59542 299 aa13.38□□□□□ -0.27
PNKP-225ENST00000636214 CTF1Q16619 201 aa13.38□□□□□ -0.27
PNKP-225ENST00000636214 ZNF114Q8NC26 417 aa13.38□□□□□ -0.27
PNKP-225ENST00000636214 MRPS26Q9BYN8 205 aaKnown RBP13.38□□□□□ -0.27
PNKP-225ENST00000636214 C6orf62Q9GZU0 229 aaPredicted RBP13.38□□□□□ -0.27
PNKP-225ENST00000636214 C3orf85A0A1B0GTC6 90 aa13.37□□□□□ -0.27
PNKP-225ENST00000636214 RAB3DO95716 219 aa13.37□□□□□ -0.27
PNKP-225ENST00000636214 CTSDP07339 412 aaPredicted RBP13.37□□□□□ -0.27
PNKP-225ENST00000636214 CTSGP08311 255 aa13.37□□□□□ -0.27
PNKP-225ENST00000636214 SMIM18P0DKX4 95 aa13.37□□□□□ -0.27
PNKP-225ENST00000636214 NPBWR1P48145 328 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms