RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 PLAC1Q9HBJ0 212 aa13.58□□□□□ -0.24
CACNA1A-221ENST00000636012 C12orf54Q6X4T0 127 aa13.58□□□□□ -0.24
CACNA1A-221ENST00000636012 KCNS1Q96KK3 526 aa13.58□□□□□ -0.24
CACNA1A-221ENST00000636012 SPOCK3Q9BQ16 436 aa13.58□□□□□ -0.24
CACNA1A-221ENST00000636012 SIRT4Q9Y6E7 314 aaPredicted RBP13.58□□□□□ -0.24
CACNA1A-221ENST00000636012 A0A0G2JLM5 398 aa13.57□□□□□ -0.24
CACNA1A-221ENST00000636012 GRIFINA4D1Z8 144 aa13.57□□□□□ -0.24
CACNA1A-221ENST00000636012 FOLR2P14207 255 aa13.57□□□□□ -0.24
CACNA1A-221ENST00000636012 SRIP30626 198 aa13.57□□□□□ -0.24
CACNA1A-221ENST00000636012 COLCA1Q6ZS62 124 aa13.57□□□□□ -0.24
CACNA1A-221ENST00000636012 FAM201AQ5SY85 155 aa13.57□□□□□ -0.24
CACNA1A-221ENST00000636012 JPT1Q9UK76 154 aa13.57□□□□□ -0.24
CACNA1A-221ENST00000636012 COL24A1Q17RW2 1714 aa13.57□□□□□ -0.24
CACNA1A-221ENST00000636012 SCN10AQ9Y5Y9 1956 aa13.57□□□□□ -0.24
CACNA1A-221ENST00000636012 ZNF729A6NN14 1252 aaPredicted RBP13.57□□□□□ -0.24
CACNA1A-221ENST00000636012 HOXB1P14653 301 aaPredicted RBP13.57□□□□□ -0.24
CACNA1A-221ENST00000636012 P2RY4P51582 365 aa13.57□□□□□ -0.24
CACNA1A-221ENST00000636012 NRN1LQ496H8 165 aa13.57□□□□□ -0.24
CACNA1A-221ENST00000636012 DERL1Q9BUN8 251 aa13.57□□□□□ -0.24
CACNA1A-221ENST00000636012 PKIBQ9C010 78 aa13.57□□□□□ -0.24
CACNA1A-221ENST00000636012 KCNE5Q9UJ90 142 aa13.57□□□□□ -0.24
CACNA1A-221ENST00000636012 FBXL7Q9UJT9 491 aa13.57□□□□□ -0.24
CACNA1A-221ENST00000636012 LINC00158P58513 81 aa13.57□□□□□ -0.24
CACNA1A-221ENST00000636012 PPP1R27Q86WC6 154 aa13.57□□□□□ -0.24
CACNA1A-221ENST00000636012 SEMA5BQ9P283 1151 aa13.57□□□□□ -0.24
CACNA1A-221ENST00000636012 IGHV3-11P01762 117 aa13.57□□□□□ -0.24
CACNA1A-221ENST00000636012 LDLRAD2Q5SZI1 272 aa13.57□□□□□ -0.24
CACNA1A-221ENST00000636012 AMELYQ99218 206 aa13.57□□□□□ -0.24
CACNA1A-221ENST00000636012 ATP5LO75964 103 aa13.57□□□□□ -0.24
CACNA1A-221ENST00000636012 ZNF600Q6ZNG1 722 aa13.56□□□□□ -0.24
CACNA1A-221ENST00000636012 Q6ZT83 130 aa13.56□□□□□ -0.24
CACNA1A-221ENST00000636012 GREB1LQ9C091 1923 aaPredicted RBP13.56□□□□□ -0.24
CACNA1A-221ENST00000636012 SCGB3A1Q96QR1 104 aa13.56□□□□□ -0.24
CACNA1A-221ENST00000636012 LY6DQ14210 128 aa13.56□□□□□ -0.24
CACNA1A-221ENST00000636012 TIMM23BQ5SRD1 257 aa13.56□□□□□ -0.24
CACNA1A-221ENST00000636012 CYP2G1PQ6ZSU1 146 aa13.56□□□□□ -0.24
CACNA1A-221ENST00000636012 SP7Q8TDD2 431 aaPredicted RBP13.56□□□□□ -0.24
CACNA1A-221ENST00000636012 PILRAQ9UKJ1 303 aa13.56□□□□□ -0.24
CACNA1A-221ENST00000636012 TCRBV4S1A1TA0A5B7 111 aa13.56□□□□□ -0.24
CACNA1A-221ENST00000636012 NGFRP08138 427 aa13.56□□□□□ -0.24
CACNA1A-221ENST00000636012 CDKN1AP38936 164 aa13.56□□□□□ -0.24
CACNA1A-221ENST00000636012 ZNF818PQ6ZRF7 136 aa13.56□□□□□ -0.24
CACNA1A-221ENST00000636012 NEU4Q8WWR8 484 aaPredicted RBP13.55□□□□□ -0.24
CACNA1A-221ENST00000636012 ARPC1AQ92747 370 aa13.55□□□□□ -0.24
CACNA1A-221ENST00000636012 FOXD3Q9UJU5 478 aaPredicted RBP13.55□□□□□ -0.24
CACNA1A-221ENST00000636012 FAM71F2Q6NXP2 309 aa13.55□□□□□ -0.24
CACNA1A-221ENST00000636012 HLA-DQA1P01909 254 aa13.55□□□□□ -0.24
CACNA1A-221ENST00000636012 NABP2Q9BQ15 211 aa13.55□□□□□ -0.24
CACNA1A-221ENST00000636012 TSC2P49815 1807 aa13.55□□□□□ -0.24
CACNA1A-221ENST00000636012 NOTCH3Q9UM47 2321 aa13.55□□□□□ -0.24
CACNA1A-221ENST00000636012 TRAV8-4A0A0B4J246 113 aa13.55□□□□□ -0.24
CACNA1A-221ENST00000636012 H3BRM9 83 aa13.55□□□□□ -0.24
CACNA1A-221ENST00000636012 H7C1H1 209 aa13.55□□□□□ -0.24
CACNA1A-221ENST00000636012 PPP1R32Q7Z5V6 425 aa13.55□□□□□ -0.24
CACNA1A-221ENST00000636012 PEMTQ9UBM1 199 aa13.55□□□□□ -0.24
CACNA1A-221ENST00000636012 TGIF2-C20orf24A0A0A6YYL0 155 aa13.55□□□□□ -0.24
CACNA1A-221ENST00000636012 AGAP20933 346 aa13.55□□□□□ -0.24
CACNA1A-221ENST00000636012 TCF19Q9Y242 345 aa13.55□□□□□ -0.24
CACNA1A-221ENST00000636012 GLRXP35754 106 aa13.55□□□□□ -0.24
CACNA1A-221ENST00000636012 ASIPP42127 132 aa13.55□□□□□ -0.24
CACNA1A-221ENST00000636012 LHX2P50458 406 aa13.55□□□□□ -0.24
CACNA1A-221ENST00000636012 ZNF345Q14585 488 aa13.55□□□□□ -0.24
CACNA1A-221ENST00000636012 FNDC4Q9H6D8 234 aaPredicted RBP13.55□□□□□ -0.24
CACNA1A-221ENST00000636012 IGHV3-73A0A0B4J1V6 119 aa13.54□□□□□ -0.24
CACNA1A-221ENST00000636012 MT-ND6P03923 174 aa13.54□□□□□ -0.24
CACNA1A-221ENST00000636012 MTURNQ8N3F0 131 aa13.54□□□□□ -0.24
CACNA1A-221ENST00000636012 JMJD8Q96S16 334 aa13.54□□□□□ -0.24
CACNA1A-221ENST00000636012 OR10S1Q8NGN2 331 aa13.54□□□□□ -0.24
CACNA1A-221ENST00000636012 SDF2L1Q9HCN8 221 aa13.54□□□□□ -0.24
CACNA1A-221ENST00000636012 CELA3AP09093 270 aa13.54□□□□□ -0.24
CACNA1A-221ENST00000636012 PMCHL1Q16048 86 aa13.54□□□□□ -0.24
CACNA1A-221ENST00000636012 C5orf47Q569G3 176 aa13.54□□□□□ -0.24
CACNA1A-221ENST00000636012 STPG2Q8N412 459 aa13.54□□□□□ -0.24
CACNA1A-221ENST00000636012 NRIP2Q9BQI9 281 aa13.54□□□□□ -0.24
CACNA1A-221ENST00000636012 MEGF9Q9H1U4 602 aa13.54□□□□□ -0.24
CACNA1A-221ENST00000636012 HLA-DRB1P01911 266 aa13.54□□□□□ -0.24
CACNA1A-221ENST00000636012 JPT2Q9H910 190 aa13.54□□□□□ -0.24
CACNA1A-221ENST00000636012 GGTLC3B5MD39 225 aa13.54□□□□□ -0.24
CACNA1A-221ENST00000636012 HBDP02042 147 aa13.54□□□□□ -0.24
CACNA1A-221ENST00000636012 CXCL2P19875 107 aa13.54□□□□□ -0.24
CACNA1A-221ENST00000636012 CENPWQ5EE01 88 aa13.54□□□□□ -0.24
CACNA1A-221ENST00000636012 PRSS23O95084 383 aa13.54□□□□□ -0.24
CACNA1A-221ENST00000636012 TRGV4A0A0C4DH28 118 aa13.53□□□□□ -0.24
CACNA1A-221ENST00000636012 C7orf66A4D0T2 115 aa13.53□□□□□ -0.24
CACNA1A-221ENST00000636012 RFPL3SP0C7P2 107 aa13.53□□□□□ -0.24
CACNA1A-221ENST00000636012 SLC25A34Q6PIV7 304 aa13.53□□□□□ -0.24
CACNA1A-221ENST00000636012 PLA2G10O15496 165 aa13.53□□□□□ -0.24
CACNA1A-221ENST00000636012 SRSF7Q16629 238 aaKnown RBP eCLIP13.53□□□□□ -0.24
CACNA1A-221ENST00000636012 ZNF703Q9H7S9 590 aaPredicted RBP13.53□□□□□ -0.24
CACNA1A-221ENST00000636012 CBLN4Q9NTU7 201 aa13.53□□□□□ -0.24
CACNA1A-221ENST00000636012 TRAV24A0A0B4J272 114 aa13.53□□□□□ -0.24
CACNA1A-221ENST00000636012 NPIPB4C9JG80 1138 aa13.53□□□□□ -0.24
CACNA1A-221ENST00000636012 CEACAM1P13688 526 aa13.53□□□□□ -0.24
CACNA1A-221ENST00000636012 HOXA5P20719 270 aa13.53□□□□□ -0.24
CACNA1A-221ENST00000636012 DRAM1Q8N682 238 aa13.53□□□□□ -0.24
CACNA1A-221ENST00000636012 ORAOV1Q8WV07 137 aa13.53□□□□□ -0.24
CACNA1A-221ENST00000636012 TXNDC17Q9BRA2 123 aa13.53□□□□□ -0.24
CACNA1A-221ENST00000636012 CNOT1A5YKK6 2376 aaKnown RBP13.53□□□□□ -0.24
CACNA1A-221ENST00000636012 FAM209AQ5JX71 171 aa13.53□□□□□ -0.24
CACNA1A-221ENST00000636012 PAPPA-AS1Q5QFB9 102 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms