RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 NAGKQ9UJ70 344 aa12.69□□□□□ -0.38
CLN8-209ENST00000635970 TMEM30CPA0ZSE6 113 aa12.68□□□□□ -0.38
CLN8-209ENST00000635970 RNF223E7ERA6 249 aa12.68□□□□□ -0.38
CLN8-209ENST00000635970 SIRPB1O00241 398 aa12.68□□□□□ -0.38
CLN8-209ENST00000635970 KRASP01116 189 aa12.68□□□□□ -0.38
CLN8-209ENST00000635970 H2BFWTQ7Z2G1 175 aa12.68□□□□□ -0.38
CLN8-209ENST00000635970 WDR86Q86TI4 376 aa12.68□□□□□ -0.38
CLN8-209ENST00000635970 GCM1Q9NP62 436 aa12.68□□□□□ -0.38
CLN8-209ENST00000635970 OOEPA6NGQ2 149 aa12.67□□□□□ -0.38
CLN8-209ENST00000635970 FAM90A9PA6NNJ1 464 aa12.67□□□□□ -0.38
CLN8-209ENST00000635970 HMGB3O15347 200 aaKnown RBP12.67□□□□□ -0.38
CLN8-209ENST00000635970 G6PCP35575 357 aa12.67□□□□□ -0.38
CLN8-209ENST00000635970 SELENOTP62341 195 aa12.67□□□□□ -0.38
CLN8-209ENST00000635970 RANP62826 216 aaKnown RBP12.67□□□□□ -0.38
CLN8-209ENST00000635970 HOXA4Q00056 320 aaPredicted RBP12.67□□□□□ -0.38
CLN8-209ENST00000635970 SLC35E4Q6ICL7 350 aa12.67□□□□□ -0.38
CLN8-209ENST00000635970 MOGAT3Q86VF5 341 aa12.67□□□□□ -0.38
CLN8-209ENST00000635970 FAM216AQ8WUB2 273 aa12.67□□□□□ -0.38
CLN8-209ENST00000635970 GATAD1Q8WUU5 269 aa12.67□□□□□ -0.38
CLN8-209ENST00000635970 PIMREGQ9BSJ6 248 aa12.67□□□□□ -0.38
CLN8-209ENST00000635970 SNHG12Q9BXW3 62 aa12.67□□□□□ -0.38
CLN8-209ENST00000635970 CLN8Q9UBY8 286 aa12.67□□□□□ -0.38
CLN8-209ENST00000635970 WDR83OSQ9Y284 106 aa12.67□□□□□ -0.38
CLN8-209ENST00000635970 ESDP10768 282 aa12.67□□□□□ -0.38
CLN8-209ENST00000635970 TNFRSF1AP19438 455 aa12.67□□□□□ -0.38
CLN8-209ENST00000635970 NPPCP23582 126 aa12.67□□□□□ -0.38
CLN8-209ENST00000635970 CHRNA7P36544 502 aa12.67□□□□□ -0.38
CLN8-209ENST00000635970 MRPS11P82912 194 aaKnown RBP12.67□□□□□ -0.38
CLN8-209ENST00000635970 SCCPDHQ8NBX0 429 aa12.67□□□□□ -0.38
CLN8-209ENST00000635970 SFRP2Q96HF1 295 aa12.67□□□□□ -0.38
CLN8-209ENST00000635970 MS4A10Q96PG2 267 aa12.67□□□□□ -0.38
CLN8-209ENST00000635970 OR2D2Q9H210 308 aa12.67□□□□□ -0.38
CLN8-209ENST00000635970 MDFIC2A0A1B0GVS7 189 aa12.66□□□□□ -0.38
CLN8-209ENST00000635970 A0A1W2PPV4 95 aa12.66□□□□□ -0.38
CLN8-209ENST00000635970 VWC2LB2RUY7 222 aa12.66□□□□□ -0.38
CLN8-209ENST00000635970 RAMP3O60896 148 aa12.66□□□□□ -0.38
CLN8-209ENST00000635970 NXPH2O95156 264 aa12.66□□□□□ -0.38
CLN8-209ENST00000635970 DSCR9P59020 149 aa12.66□□□□□ -0.38
CLN8-209ENST00000635970 GNB1P62873 340 aa12.66□□□□□ -0.38
CLN8-209ENST00000635970 AARDQ4LEZ3 155 aa12.66□□□□□ -0.38
CLN8-209ENST00000635970 TMEM68Q96MH6 324 aa12.66□□□□□ -0.38
CLN8-209ENST00000635970 HSD17B10Q99714 261 aaKnown RBP12.66□□□□□ -0.38
CLN8-209ENST00000635970 KIAA2026Q5HYC2 2103 aa12.65□□□□□ -0.38
CLN8-209ENST00000635970 A0A096LNT2 108 aa12.65□□□□□ -0.38
CLN8-209ENST00000635970 EREGO14944 169 aa12.65□□□□□ -0.38
CLN8-209ENST00000635970 SMAD7O15105 426 aaKnown RBP12.65□□□□□ -0.38
CLN8-209ENST00000635970 GRPP07492 148 aa12.65□□□□□ -0.38
CLN8-209ENST00000635970 CD1BP29016 333 aa12.65□□□□□ -0.38
CLN8-209ENST00000635970 OPRK1P41145 380 aa12.65□□□□□ -0.38
CLN8-209ENST00000635970 TEX38Q6PEX7 206 aa12.65□□□□□ -0.38
CLN8-209ENST00000635970 OR1L1Q8NH94 360 aa12.65□□□□□ -0.38
CLN8-209ENST00000635970 TMEM106BQ9NUM4 274 aa12.65□□□□□ -0.38
CLN8-209ENST00000635970 YLPM1P49750 1951 aaKnown RBP12.65□□□□□ -0.38
CLN8-209ENST00000635970 ACANP16112 2415 aa12.65□□□□□ -0.38
CLN8-209ENST00000635970 SVEP1Q4LDE5 3571 aa12.65□□□□□ -0.38
CLN8-209ENST00000635970 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.65□□□□□ -0.38
CLN8-209ENST00000635970 NDUFS8O00217 210 aa12.65□□□□□ -0.38
CLN8-209ENST00000635970 WNT9BO14905 357 aa12.65□□□□□ -0.38
CLN8-209ENST00000635970 S1PR2O95136 353 aa12.65□□□□□ -0.38
CLN8-209ENST00000635970 GATA4P43694 442 aa12.65□□□□□ -0.38
CLN8-209ENST00000635970 TPPP2P59282 170 aa12.65□□□□□ -0.38
CLN8-209ENST00000635970 ZNF826PQ6ZT77 177 aa12.65□□□□□ -0.38
CLN8-209ENST00000635970 SGMS2Q8NHU3 365 aa12.65□□□□□ -0.38
CLN8-209ENST00000635970 C20orf144Q9BQM9 153 aa12.65□□□□□ -0.38
CLN8-209ENST00000635970 POLR3KQ9Y2Y1 108 aaPredicted RBP12.65□□□□□ -0.38
CLN8-209ENST00000635970 LY96Q9Y6Y9 160 aa12.65□□□□□ -0.38
CLN8-209ENST00000635970 TRAV39A0A0B4J263 110 aa12.64□□□□□ -0.39
CLN8-209ENST00000635970 IGHV4-61A0A0C4DH41 118 aa12.64□□□□□ -0.39
CLN8-209ENST00000635970 NDUFB4O95168 129 aa12.64□□□□□ -0.39
CLN8-209ENST00000635970 GPR6P46095 362 aaPredicted RBP12.64□□□□□ -0.39
CLN8-209ENST00000635970 RPL30P62888 115 aaKnown RBP12.64□□□□□ -0.39
CLN8-209ENST00000635970 RPL19P84098 196 aaKnown RBP12.64□□□□□ -0.39
CLN8-209ENST00000635970 ZNF816Q0VGE8 651 aaPredicted RBP12.64□□□□□ -0.39
CLN8-209ENST00000635970 CST9LP1Q5W188 147 aa12.64□□□□□ -0.39
CLN8-209ENST00000635970 CMTM2Q8TAZ6 248 aa12.64□□□□□ -0.39
CLN8-209ENST00000635970 HES4Q9HCC6 221 aa12.64□□□□□ -0.39
CLN8-209ENST00000635970 ABCA2Q9BZC7 2435 aa12.64□□□□□ -0.39
CLN8-209ENST00000635970 CXorf1O96002 111 aa12.63□□□□□ -0.39
CLN8-209ENST00000635970 HAND1O96004 215 aa12.63□□□□□ -0.39
CLN8-209ENST00000635970 SLC25A16P16260 332 aa12.63□□□□□ -0.39
CLN8-209ENST00000635970 GAGE1Q13065 139 aa12.63□□□□□ -0.39
CLN8-209ENST00000635970 FAM201AQ5SY85 155 aa12.63□□□□□ -0.39
CLN8-209ENST00000635970 Q8N7P7 452 aa12.63□□□□□ -0.39
CLN8-209ENST00000635970 MED13LQ71F56 2210 aa12.63□□□□□ -0.39
CLN8-209ENST00000635970 F8P00451 2351 aa12.63□□□□□ -0.39
CLN8-209ENST00000635970 TRBV9A0A0B4J1U6 114 aa12.63□□□□□ -0.39
CLN8-209ENST00000635970 C3orf80F5H4A9 247 aa12.63□□□□□ -0.39
CLN8-209ENST00000635970 OR3A1P47881 315 aa12.63□□□□□ -0.39
CLN8-209ENST00000635970 TRAT1Q6PIZ9 186 aa12.63□□□□□ -0.39
CLN8-209ENST00000635970 OR52E5Q8NH55 327 aa12.63□□□□□ -0.39
CLN8-209ENST00000635970 TMUB1Q9BVT8 246 aa12.63□□□□□ -0.39
CLN8-209ENST00000635970 C15orf62A8K5M9 175 aa12.62□□□□□ -0.39
CLN8-209ENST00000635970 C17orf98A8MV24 154 aa12.62□□□□□ -0.39
CLN8-209ENST00000635970 C12orf77C9JDV5 145 aa12.62□□□□□ -0.39
CLN8-209ENST00000635970 TMEM178BH3BS89 294 aa12.62□□□□□ -0.39
CLN8-209ENST00000635970 RBMXL2O75526 392 aaKnown RBP12.62□□□□□ -0.39
CLN8-209ENST00000635970 STAG3L2P0CL84 134 aa12.62□□□□□ -0.39
CLN8-209ENST00000635970 STAG3L3P0CL85 134 aa12.62□□□□□ -0.39
CLN8-209ENST00000635970 BTF3P20290 206 aaKnown RBP12.62□□□□□ -0.39
CLN8-209ENST00000635970 PDLIM3Q53GG5 364 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms