RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 C11orf68Q9H3H3 251 aaKnown RBP9.38□□□□□ -0.91
LINC00339-206ENST00000634451 NDUFA4L2Q9NRX3 87 aa9.38□□□□□ -0.91
LINC00339-206ENST00000634451 RRP15Q9Y3B9 282 aaKnown RBP9.38□□□□□ -0.91
LINC00339-206ENST00000634451 A0A1B0GVY2 172 aa9.37□□□□□ -0.91
LINC00339-206ENST00000634451 K7EMT4 169 aa9.37□□□□□ -0.91
LINC00339-206ENST00000634451 NUPL2O15504 423 aaKnown RBP9.37□□□□□ -0.91
LINC00339-206ENST00000634451 GIG44P09565 113 aaPredicted RBP9.37□□□□□ -0.91
LINC00339-206ENST00000634451 RBMY1A1P0DJD3 496 aaKnown RBP9.37□□□□□ -0.91
LINC00339-206ENST00000634451 RBMY1CP0DJD4 496 aa9.37□□□□□ -0.91
LINC00339-206ENST00000634451 G6PCP35575 357 aa9.37□□□□□ -0.91
LINC00339-206ENST00000634451 ARL6IP1Q15041 203 aa9.37□□□□□ -0.91
LINC00339-206ENST00000634451 RBMY1FQ15415 496 aaKnown RBP9.37□□□□□ -0.91
LINC00339-206ENST00000634451 SFXN4Q6P4A7 337 aa9.37□□□□□ -0.91
LINC00339-206ENST00000634451 Q8NAQ8 132 aa9.37□□□□□ -0.91
LINC00339-206ENST00000634451 TMEM116Q8NCL8 245 aa9.37□□□□□ -0.91
LINC00339-206ENST00000634451 C2CD4CQ8TF44 421 aa9.37□□□□□ -0.91
LINC00339-206ENST00000634451 GIMAP1Q8WWP7 306 aa9.37□□□□□ -0.91
LINC00339-206ENST00000634451 FCAMRQ8WWV6 532 aa9.37□□□□□ -0.91
LINC00339-206ENST00000634451 CNBD2Q96M20 576 aa9.37□□□□□ -0.91
LINC00339-206ENST00000634451 SRSF8Q9BRL6 282 aaKnown RBP9.37□□□□□ -0.91
LINC00339-206ENST00000634451 PLEKHA2Q9HB19 425 aa9.37□□□□□ -0.91
LINC00339-206ENST00000634451 THYN1Q9P016 225 aa9.37□□□□□ -0.91
LINC00339-206ENST00000634451 MARCH11A6NNE9 402 aa9.36□□□□□ -0.91
LINC00339-206ENST00000634451 C15orf62A8K5M9 175 aa9.36□□□□□ -0.91
LINC00339-206ENST00000634451 YIF1AO95070 293 aa9.36□□□□□ -0.91
LINC00339-206ENST00000634451 KRASP01116 189 aa9.36□□□□□ -0.91
LINC00339-206ENST00000634451 IFNA4P05014 189 aa9.36□□□□□ -0.91
LINC00339-206ENST00000634451 GNRHRP30968 328 aa9.36□□□□□ -0.91
LINC00339-206ENST00000634451 LPAR6P43657 344 aa9.36□□□□□ -0.91
LINC00339-206ENST00000634451 MXD1Q05195 221 aa9.36□□□□□ -0.91
LINC00339-206ENST00000634451 CATR1Q13166 79 aa9.36□□□□□ -0.91
LINC00339-206ENST00000634451 MSMO1Q15800 293 aa9.36□□□□□ -0.91
LINC00339-206ENST00000634451 SPSB3Q6PJ21 355 aa9.36□□□□□ -0.91
LINC00339-206ENST00000634451 ZNF767PQ75MW2 155 aa9.36□□□□□ -0.91
LINC00339-206ENST00000634451 OR1L8Q8NGR8 309 aa9.36□□□□□ -0.91
LINC00339-206ENST00000634451 ST8SIA2Q92186 375 aa9.36□□□□□ -0.91
LINC00339-206ENST00000634451 LSM10Q969L4 123 aaKnown RBP9.36□□□□□ -0.91
LINC00339-206ENST00000634451 SLC25A46Q96AG3 418 aa9.36□□□□□ -0.91
LINC00339-206ENST00000634451 MISP3Q96FF7 219 aa9.36□□□□□ -0.91
LINC00339-206ENST00000634451 KRTAP4-5Q9BYR2 181 aa9.36□□□□□ -0.91
LINC00339-206ENST00000634451 OR51B2Q9Y5P1 312 aa9.36□□□□□ -0.91
LINC00339-206ENST00000634451 IGHV4-28A0A0C4DH34 117 aa9.35□□□□□ -0.91
LINC00339-206ENST00000634451 I3L2K1 104 aa9.35□□□□□ -0.91
LINC00339-206ENST00000634451 C4BPBP20851 252 aa9.35□□□□□ -0.91
LINC00339-206ENST00000634451 SDC2P34741 201 aa9.35□□□□□ -0.91
LINC00339-206ENST00000634451 RANBP1P43487 201 aa9.35□□□□□ -0.91
LINC00339-206ENST00000634451 DEFB131AP59861 70 aa9.35□□□□□ -0.91
LINC00339-206ENST00000634451 Q6ZTC4 211 aa9.35□□□□□ -0.91
LINC00339-206ENST00000634451 TCF24Q7RTU0 167 aa9.35□□□□□ -0.91
LINC00339-206ENST00000634451 ZBTB34Q8NCN2 500 aa9.35□□□□□ -0.91
LINC00339-206ENST00000634451 MFFQ9GZY8 342 aa9.35□□□□□ -0.91
LINC00339-206ENST00000634451 FXYD6Q9H0Q3 95 aa9.35□□□□□ -0.91
LINC00339-206ENST00000634451 AUNIPQ9H7T9 357 aa9.35□□□□□ -0.91
LINC00339-206ENST00000634451 COMMD9Q9P000 198 aa9.35□□□□□ -0.91
LINC00339-206ENST00000634451 PGLYRP1O75594 196 aaPredicted RBP9.34□□□□□ -0.91
LINC00339-206ENST00000634451 DFFBO76075 338 aa9.34□□□□□ -0.91
LINC00339-206ENST00000634451 PSMB9P28065 219 aa9.34□□□□□ -0.91
LINC00339-206ENST00000634451 HLA-DMBP28068 263 aa9.34□□□□□ -0.91
LINC00339-206ENST00000634451 RFX2P48378 723 aa9.34□□□□□ -0.91
LINC00339-206ENST00000634451 SPINK9Q5DT21 86 aa9.34□□□□□ -0.91
LINC00339-206ENST00000634451 IZUMO2Q6UXV1 221 aa9.34□□□□□ -0.91
LINC00339-206ENST00000634451 OR10C1Q96KK4 312 aa9.34□□□□□ -0.91
LINC00339-206ENST00000634451 ELOA3CA0A087WX78 387 aaPredicted RBP9.33□□□□□ -0.92
LINC00339-206ENST00000634451 KNCNA6PVL3 124 aa9.33□□□□□ -0.92
LINC00339-206ENST00000634451 MT-CO2P00403 227 aa9.33□□□□□ -0.92
LINC00339-206ENST00000634451 FGF9P31371 208 aaPredicted RBP9.33□□□□□ -0.92
LINC00339-206ENST00000634451 ERVK-16P61578 105 aa9.33□□□□□ -0.92
LINC00339-206ENST00000634451 TMEM187Q14656 261 aa9.33□□□□□ -0.92
LINC00339-206ENST00000634451 IZUMO4Q1ZYL8 232 aa9.33□□□□□ -0.92
LINC00339-206ENST00000634451 IDNKQ5T6J7 187 aa9.33□□□□□ -0.92
LINC00339-206ENST00000634451 TOMM20LQ6UXN7 152 aa9.33□□□□□ -0.92
LINC00339-206ENST00000634451 C6orf62Q9GZU0 229 aaPredicted RBP9.33□□□□□ -0.92
LINC00339-206ENST00000634451 NXF2Q9GZY0 626 aaKnown RBP9.33□□□□□ -0.92
LINC00339-206ENST00000634451 MS4A6AQ9H2W1 248 aa9.33□□□□□ -0.92
LINC00339-206ENST00000634451 CLEC5AQ9NY25 188 aa9.33□□□□□ -0.92
LINC00339-206ENST00000634451 EHFQ9NZC4 300 aa9.33□□□□□ -0.92
LINC00339-206ENST00000634451 CELA1Q9UNI1 258 aa9.33□□□□□ -0.92
LINC00339-206ENST00000634451 PKD1P98161 4303 aa9.32□□□□□ -0.92
LINC00339-206ENST00000634451 IGHV4-4A0A075B6R2 117 aa9.32□□□□□ -0.92
LINC00339-206ENST00000634451 TRAV14DV4A0A0A6YYC5 116 aa9.32□□□□□ -0.92
LINC00339-206ENST00000634451 RTL8CO15255 209 aa9.32□□□□□ -0.92
LINC00339-206ENST00000634451 IGKV1-39P01597 117 aa9.32□□□□□ -0.92
LINC00339-206ENST00000634451 PMP2P02689 132 aa9.32□□□□□ -0.92
LINC00339-206ENST00000634451 IGKV1D-39P04432 117 aa9.32□□□□□ -0.92
LINC00339-206ENST00000634451 F2RP25116 425 aa9.32□□□□□ -0.92
LINC00339-206ENST00000634451 TGFBR1P36897 503 aa9.32□□□□□ -0.92
LINC00339-206ENST00000634451 HERV-K104P61576 105 aa9.32□□□□□ -0.92
LINC00339-206ENST00000634451 UBE2UQ5VVX9 321 aa9.32□□□□□ -0.92
LINC00339-206ENST00000634451 SPARTQ8N0X7 666 aa9.32□□□□□ -0.92
LINC00339-206ENST00000634451 OR5AP2Q8NGF4 316 aa9.32□□□□□ -0.92
LINC00339-206ENST00000634451 PINX1Q96BK5 328 aaKnown RBP9.32□□□□□ -0.92
LINC00339-206ENST00000634451 DGCR14Q96DF8 476 aaKnown RBP9.32□□□□□ -0.92
LINC00339-206ENST00000634451 AIFM2Q9BRQ8 373 aa9.32□□□□□ -0.92
LINC00339-206ENST00000634451 ZNF2Q9BSG1 426 aaPredicted RBP9.32□□□□□ -0.92
LINC00339-206ENST00000634451 ZFAND3Q9H8U3 227 aa9.32□□□□□ -0.92
LINC00339-206ENST00000634451 MRPL36Q9P0J6 103 aaKnown RBP9.32□□□□□ -0.92
LINC00339-206ENST00000634451 X6R8D5 127 aa9.32□□□□□ -0.92
LINC00339-206ENST00000634451 A0A1B0GU03 582 aa9.31□□□□□ -0.92
LINC00339-206ENST00000634451 C15orf61A6NNL5 157 aa9.31□□□□□ -0.92
LINC00339-206ENST00000634451 M0R2N4 97 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms