RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 COL4A5P29400 1685 aa9.92□□□□□ -0.82
SHPRH-211ENST00000629427 CGAP01215 116 aa9.92□□□□□ -0.82
SHPRH-211ENST00000629427 SLC25A34Q6PIV7 304 aa9.92□□□□□ -0.82
SHPRH-211ENST00000629427 UQCR10Q9UDW1 63 aa9.92□□□□□ -0.82
SHPRH-211ENST00000629427 IL6RP08887 468 aaPredicted RBP9.92□□□□□ -0.82
SHPRH-211ENST00000629427 IGFBP2P18065 325 aa9.92□□□□□ -0.82
SHPRH-211ENST00000629427 CFAP161Q6P656 301 aa9.92□□□□□ -0.82
SHPRH-211ENST00000629427 GREM1O60565 184 aa9.92□□□□□ -0.82
SHPRH-211ENST00000629427 EGR4Q05215 589 aa9.92□□□□□ -0.82
SHPRH-211ENST00000629427 SLC25A38Q96DW6 304 aa9.92□□□□□ -0.82
SHPRH-211ENST00000629427 WFIKKN1Q96NZ8 548 aa9.92□□□□□ -0.82
SHPRH-211ENST00000629427 VGLL1Q99990 258 aa9.92□□□□□ -0.82
SHPRH-211ENST00000629427 RPRMQ9NS64 109 aa9.92□□□□□ -0.82
SHPRH-211ENST00000629427 TRBV9A0A0B4J1U6 114 aa9.92□□□□□ -0.82
SHPRH-211ENST00000629427 ZNF815PA8K554 130 aa9.92□□□□□ -0.82
SHPRH-211ENST00000629427 C17orf100A8MU93 164 aa9.92□□□□□ -0.82
SHPRH-211ENST00000629427 TMEM250H0YL14 139 aa9.92□□□□□ -0.82
SHPRH-211ENST00000629427 K7ERU9 68 aa9.92□□□□□ -0.82
SHPRH-211ENST00000629427 SOD3P08294 240 aa9.92□□□□□ -0.82
SHPRH-211ENST00000629427 UCP3P55916 312 aa9.92□□□□□ -0.82
SHPRH-211ENST00000629427 OSR1Q8TAX0 266 aaPredicted RBP9.92□□□□□ -0.82
SHPRH-211ENST00000629427 HIST1H2BAQ96A08 127 aa9.92□□□□□ -0.82
SHPRH-211ENST00000629427 SCGB3A1Q96QR1 104 aa9.92□□□□□ -0.82
SHPRH-211ENST00000629427 WNT10AQ9GZT5 417 aa9.92□□□□□ -0.82
SHPRH-211ENST00000629427 KBTBD11-OT1A0A1B0GTJ5 212 aa9.91□□□□□ -0.82
SHPRH-211ENST00000629427 IFI6P09912 130 aa9.91□□□□□ -0.82
SHPRH-211ENST00000629427 ZNF385CQ66K41 422 aaPredicted RBP9.91□□□□□ -0.82
SHPRH-211ENST00000629427 ZNF660Q6AZW8 331 aaPredicted RBP9.91□□□□□ -0.82
SHPRH-211ENST00000629427 METRNQ9UJH8 293 aa9.91□□□□□ -0.82
SHPRH-211ENST00000629427 H3BRM9 83 aa9.91□□□□□ -0.82
SHPRH-211ENST00000629427 CNTFRP26992 372 aa9.91□□□□□ -0.82
SHPRH-211ENST00000629427 GATAD1Q8WUU5 269 aa9.91□□□□□ -0.82
SHPRH-211ENST00000629427 ZNF414Q96IQ9 312 aa9.91□□□□□ -0.82
SHPRH-211ENST00000629427 CBLN4Q9NTU7 201 aa9.91□□□□□ -0.82
SHPRH-211ENST00000629427 MRPL16Q9NX20 251 aaKnown RBP9.91□□□□□ -0.82
SHPRH-211ENST00000629427 COL4A1P02462 1669 aa9.91□□□□□ -0.82
SHPRH-211ENST00000629427 ARFGEF3Q5TH69 2177 aa9.91□□□□□ -0.82
SHPRH-211ENST00000629427 NRN1LQ496H8 165 aa9.91□□□□□ -0.82
SHPRH-211ENST00000629427 C9orf106Q8NAJ2 232 aa9.91□□□□□ -0.82
SHPRH-211ENST00000629427 MRPL20Q9BYC9 149 aaKnown RBP9.91□□□□□ -0.82
SHPRH-211ENST00000629427 PRSS22Q9GZN4 317 aa9.91□□□□□ -0.82
SHPRH-211ENST00000629427 CD7P09564 240 aa9.91□□□□□ -0.82
SHPRH-211ENST00000629427 FAM71F2Q6NXP2 309 aa9.91□□□□□ -0.82
SHPRH-211ENST00000629427 CNOT1A5YKK6 2376 aaKnown RBP9.91□□□□□ -0.82
SHPRH-211ENST00000629427 CD24P25063 80 aa9.91□□□□□ -0.82
SHPRH-211ENST00000629427 GPX4P36969 197 aaPredicted RBP9.91□□□□□ -0.82
SHPRH-211ENST00000629427 PSG7Q13046 419 aa9.91□□□□□ -0.82
SHPRH-211ENST00000629427 APCDD1LQ8NCL9 501 aa9.91□□□□□ -0.82
SHPRH-211ENST00000629427 IFI27L2Q9H2X8 130 aa9.91□□□□□ -0.82
SHPRH-211ENST00000629427 JKAMPQ9P055 326 aa9.91□□□□□ -0.82
SHPRH-211ENST00000629427 NDUFA3O95167 84 aa9.91□□□□□ -0.82
SHPRH-211ENST00000629427 POC1AQ8NBT0 407 aa9.91□□□□□ -0.82
SHPRH-211ENST00000629427 SRD5A1P18405 259 aa9.9□□□□□ -0.82
SHPRH-211ENST00000629427 ATP5IP56385 69 aaPredicted RBP9.9□□□□□ -0.82
SHPRH-211ENST00000629427 C1QL2Q7Z5L3 287 aa9.9□□□□□ -0.82
SHPRH-211ENST00000629427 TMEM167AQ8TBQ9 72 aa9.9□□□□□ -0.82
SHPRH-211ENST00000629427 WDYHV1Q96HA8 205 aa9.9□□□□□ -0.82
SHPRH-211ENST00000629427 PLSCR2Q9NRY7 297 aa9.9□□□□□ -0.82
SHPRH-211ENST00000629427 TRBV7-9A0A0J9YWB2 115 aa9.9□□□□□ -0.82
SHPRH-211ENST00000629427 BEND2Q8NDZ0 799 aa9.9□□□□□ -0.82
SHPRH-211ENST00000629427 J3QW42 95 aa9.9□□□□□ -0.82
SHPRH-211ENST00000629427 PIN1P1O15428 100 aa9.9□□□□□ -0.82
SHPRH-211ENST00000629427 SMIM13P0DJ93 91 aa9.9□□□□□ -0.82
SHPRH-211ENST00000629427 NUDT10Q8NFP7 164 aa9.9□□□□□ -0.82
SHPRH-211ENST00000629427 NUDT11Q96G61 164 aa9.9□□□□□ -0.82
SHPRH-211ENST00000629427 NPCDR1Q9BY65 106 aa9.9□□□□□ -0.82
SHPRH-211ENST00000629427 SOX21Q9Y651 276 aaPredicted RBP9.9□□□□□ -0.82
SHPRH-211ENST00000629427 SAA1P0DJI8 122 aaPredicted RBP9.9□□□□□ -0.82
SHPRH-211ENST00000629427 FHITP49789 147 aa9.9□□□□□ -0.82
SHPRH-211ENST00000629427 C12orf77C9JDV5 145 aa9.9□□□□□ -0.83
SHPRH-211ENST00000629427 GCM2O75603 506 aaPredicted RBP9.9□□□□□ -0.83
SHPRH-211ENST00000629427 DANCRP0C864 163 aa9.9□□□□□ -0.83
SHPRH-211ENST00000629427 CBLN1P23435 193 aa9.9□□□□□ -0.83
SHPRH-211ENST00000629427 MYOD1P15172 320 aa9.9□□□□□ -0.83
SHPRH-211ENST00000629427 TFF3Q07654 80 aa9.9□□□□□ -0.83
SHPRH-211ENST00000629427 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.9□□□□□ -0.83
SHPRH-211ENST00000629427 FMC1Q96HJ9 113 aa9.9□□□□□ -0.83
SHPRH-211ENST00000629427 PMCHL2Q9BQD1 86 aa9.9□□□□□ -0.83
SHPRH-211ENST00000629427 AICDAQ9GZX7 198 aa9.9□□□□□ -0.83
SHPRH-211ENST00000629427 ADAMTS7Q9UKP4 1686 aa9.89□□□□□ -0.83
SHPRH-211ENST00000629427 NPIPB13A6NJU9 1138 aa9.89□□□□□ -0.83
SHPRH-211ENST00000629427 PAX1P15863 534 aa9.89□□□□□ -0.83
SHPRH-211ENST00000629427 TMEM105Q8N8V8 129 aa9.89□□□□□ -0.83
SHPRH-211ENST00000629427 C17orf98A8MV24 154 aa9.89□□□□□ -0.83
SHPRH-211ENST00000629427 FOXA3P55318 350 aaPredicted RBP9.89□□□□□ -0.83
SHPRH-211ENST00000629427 C8orf46Q8TAG6 207 aa9.89□□□□□ -0.83
SHPRH-211ENST00000629427 KCNS1Q96KK3 526 aa9.89□□□□□ -0.83
SHPRH-211ENST00000629427 NACAE9PAV3 2078 aa9.89□□□□□ -0.83
SHPRH-211ENST00000629427 TBR1Q16650 682 aa9.89□□□□□ -0.83
SHPRH-211ENST00000629427 TMEM183AQ8IXX5 376 aa9.89□□□□□ -0.83
SHPRH-211ENST00000629427 TMEM14DPA8MWL7 114 aa9.89□□□□□ -0.83
SHPRH-211ENST00000629427 H2BFSP57053 126 aa9.89□□□□□ -0.83
SHPRH-211ENST00000629427 C2orf68Q2NKX9 166 aa9.89□□□□□ -0.83
SHPRH-211ENST00000629427 TMEM42Q69YG0 159 aa9.89□□□□□ -0.83
SHPRH-211ENST00000629427 OR13A1Q8NGR1 328 aa9.89□□□□□ -0.83
SHPRH-211ENST00000629427 OR52E5Q8NH55 327 aa9.89□□□□□ -0.83
SHPRH-211ENST00000629427 MGAMO43451 1857 aa9.89□□□□□ -0.83
SHPRH-211ENST00000629427 WDR81Q562E7 1941 aa9.89□□□□□ -0.83
SHPRH-211ENST00000629427 LINC01590Q5TEZ4 76 aa9.89□□□□□ -0.83
SHPRH-211ENST00000629427 LINC00312Q9Y6C7 94 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms