RNA–Protein interactions for RNA: ENST00000629104.1

CHD2-216, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-216ENST00000629104 ST8SIA3O43173 380 aa6.83□□□□□ -1.32
CHD2-216ENST00000629104 LYRM1O43325 122 aa6.83□□□□□ -1.32
CHD2-216ENST00000629104 NDUFB8O95169 186 aa6.83□□□□□ -1.32
CHD2-216ENST00000629104 TRBV12-3P01733 135 aa6.83□□□□□ -1.32
CHD2-216ENST00000629104 VAMP1P23763 118 aa6.83□□□□□ -1.32
CHD2-216ENST00000629104 MECP2P51608 486 aaKnown RBP6.83□□□□□ -1.32
CHD2-216ENST00000629104 SLURP1P55000 103 aa6.83□□□□□ -1.32
CHD2-216ENST00000629104 SRPXP78539 464 aa6.83□□□□□ -1.32
CHD2-216ENST00000629104 PPP1R1AQ13522 171 aa6.83□□□□□ -1.32
CHD2-216ENST00000629104 EXOSC2Q13868 293 aaKnown RBP6.83□□□□□ -1.32
CHD2-216ENST00000629104 ZNF846Q147U1 533 aa6.83□□□□□ -1.32
CHD2-216ENST00000629104 BEAN1Q3B7T3 259 aa6.83□□□□□ -1.32
CHD2-216ENST00000629104 KPRPQ5T749 579 aaPredicted RBP6.83□□□□□ -1.32
CHD2-216ENST00000629104 Q6ZRM9 215 aa6.83□□□□□ -1.32
CHD2-216ENST00000629104 SLC35G3Q8N808 338 aa6.83□□□□□ -1.32
CHD2-216ENST00000629104 DCUN1D4Q92564 292 aa6.83□□□□□ -1.32
CHD2-216ENST00000629104 MCRIP2Q9BUT9 160 aaKnown RBP6.83□□□□□ -1.32
CHD2-216ENST00000629104 WDR12Q9GZL7 423 aaKnown RBP6.83□□□□□ -1.32
CHD2-216ENST00000629104 RANGRFQ9HD47 186 aaPredicted RBP6.83□□□□□ -1.32
CHD2-216ENST00000629104 PEF1Q9UBV8 284 aaKnown RBP6.83□□□□□ -1.32
CHD2-216ENST00000629104 F11RQ9Y624 299 aaKnown RBP6.83□□□□□ -1.32
CHD2-216ENST00000629104 NOTCH3Q9UM47 2321 aa6.82□□□□□ -1.32
CHD2-216ENST00000629104 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.82□□□□□ -1.32
CHD2-216ENST00000629104 A0A0B4J2A0 478 aa6.82□□□□□ -1.32
CHD2-216ENST00000629104 OVOL1O14753 267 aa6.82□□□□□ -1.32
CHD2-216ENST00000629104 CYB5BO43169 146 aa6.82□□□□□ -1.32
CHD2-216ENST00000629104 SFT2D2O95562 160 aa6.82□□□□□ -1.32
CHD2-216ENST00000629104 IFNA17P01571 189 aa6.82□□□□□ -1.32
CHD2-216ENST00000629104 ZP3P21754 424 aa6.82□□□□□ -1.32
CHD2-216ENST00000629104 HOXD3P31249 432 aaPredicted RBP6.82□□□□□ -1.32
CHD2-216ENST00000629104 MFAP2P55001 183 aa6.82□□□□□ -1.32
CHD2-216ENST00000629104 UBE2MP61081 183 aaKnown RBP6.82□□□□□ -1.32
CHD2-216ENST00000629104 ANKRD55Q3KP44 614 aa6.82□□□□□ -1.32
CHD2-216ENST00000629104 AARDQ4LEZ3 155 aa6.82□□□□□ -1.32
CHD2-216ENST00000629104 SPINK9Q5DT21 86 aa6.82□□□□□ -1.32
CHD2-216ENST00000629104 LYZL2Q7Z4W2 148 aa6.82□□□□□ -1.32
CHD2-216ENST00000629104 LGI3Q8N145 548 aa6.82□□□□□ -1.32
CHD2-216ENST00000629104 OR2C3Q8N628 320 aa6.82□□□□□ -1.32
CHD2-216ENST00000629104 DLX4Q92988 240 aaPredicted RBP6.82□□□□□ -1.32
CHD2-216ENST00000629104 GPR146Q96CH1 333 aa6.82□□□□□ -1.32
CHD2-216ENST00000629104 PDCD10Q9BUL8 212 aa6.82□□□□□ -1.32
CHD2-216ENST00000629104 GPR61Q9BZJ8 451 aa6.82□□□□□ -1.32
CHD2-216ENST00000629104 PLEKHA3Q9HB20 300 aa6.82□□□□□ -1.32
CHD2-216ENST00000629104 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.82□□□□□ -1.32
CHD2-216ENST00000629104 THYN1Q9P016 225 aa6.82□□□□□ -1.32
CHD2-216ENST00000629104 CACNG5Q9UF02 275 aa6.82□□□□□ -1.32
CHD2-216ENST00000629104 SHPKQ9UHJ6 478 aa6.82□□□□□ -1.32
CHD2-216ENST00000629104 FLVCR2Q9UPI3 526 aa6.82□□□□□ -1.32
CHD2-216ENST00000629104 PIGBOS1A0A0B4J2F0 54 aa6.81□□□□□ -1.32
CHD2-216ENST00000629104 DUXBA0A1W2PPF3 345 aa6.81□□□□□ -1.32
CHD2-216ENST00000629104 MFSD2BA6NFX1 497 aa6.81□□□□□ -1.32
CHD2-216ENST00000629104 INS-IGF2F8WCM5 200 aa6.81□□□□□ -1.32
CHD2-216ENST00000629104 UPK1BO75841 260 aa6.81□□□□□ -1.32
CHD2-216ENST00000629104 IGHV3-23P01764 117 aa6.81□□□□□ -1.32
CHD2-216ENST00000629104 ERHP84090 104 aaKnown RBP6.81□□□□□ -1.32
CHD2-216ENST00000629104 PDLIM3Q53GG5 364 aaPredicted RBP6.81□□□□□ -1.32
CHD2-216ENST00000629104 NMSQ5H8A3 153 aa6.81□□□□□ -1.32
CHD2-216ENST00000629104 FAM209BQ5JX69 171 aa6.81□□□□□ -1.32
CHD2-216ENST00000629104 SLC25A24Q6NUK1 477 aa6.81□□□□□ -1.32
CHD2-216ENST00000629104 LRTM2Q8N967 370 aa6.81□□□□□ -1.32
CHD2-216ENST00000629104 ZNF114Q8NC26 417 aa6.81□□□□□ -1.32
CHD2-216ENST00000629104 OR1L6Q8NGR2 347 aa6.81□□□□□ -1.32
CHD2-216ENST00000629104 OR1P1Q8NH06 330 aa6.81□□□□□ -1.32
CHD2-216ENST00000629104 OR52E5Q8NH55 327 aa6.81□□□□□ -1.32
CHD2-216ENST00000629104 EEF1AKMT3Q96AZ1 226 aa6.81□□□□□ -1.32
CHD2-216ENST00000629104 CXorf58Q96LI9 332 aa6.81□□□□□ -1.32
CHD2-216ENST00000629104 CCDC140Q96MF4 163 aa6.81□□□□□ -1.32
CHD2-216ENST00000629104 TBC1D24Q9ULP9 559 aa6.81□□□□□ -1.32
CHD2-216ENST00000629104 S4R3C0 116 aa6.81□□□□□ -1.32
CHD2-216ENST00000629104 TRBV7-1A0A0A6YYK4 115 aa6.8□□□□□ -1.32
CHD2-216ENST00000629104 C9orf170A2RU37 121 aa6.8□□□□□ -1.32
CHD2-216ENST00000629104 SEC14L6B5MCN3 397 aa6.8□□□□□ -1.32
CHD2-216ENST00000629104 J3QL48 77 aa6.8□□□□□ -1.32
CHD2-216ENST00000629104 BMPR1BO00238 502 aa6.8□□□□□ -1.32
CHD2-216ENST00000629104 WIPF1O43516 503 aa6.8□□□□□ -1.32
CHD2-216ENST00000629104 HLA-AP01891 365 aaKnown RBP6.8□□□□□ -1.32
CHD2-216ENST00000629104 TCRBP04435 133 aa6.8□□□□□ -1.32
CHD2-216ENST00000629104 OR4E1P0C645 316 aa6.8□□□□□ -1.32
CHD2-216ENST00000629104 SULT1A3P0DMM9 295 aa6.8□□□□□ -1.32
CHD2-216ENST00000629104 SULT1A4P0DMN0 295 aa6.8□□□□□ -1.32
CHD2-216ENST00000629104 ANXA7P20073 488 aaKnown RBP6.8□□□□□ -1.32
CHD2-216ENST00000629104 HOXA1P49639 335 aaPredicted RBP6.8□□□□□ -1.32
CHD2-216ENST00000629104 SPCS3P61009 180 aa6.8□□□□□ -1.32
CHD2-216ENST00000629104 DEFA6Q01524 100 aa6.8□□□□□ -1.32
CHD2-216ENST00000629104 ASAH1Q13510 395 aa6.8□□□□□ -1.32
CHD2-216ENST00000629104 KLF5Q13887 457 aaPredicted RBP6.8□□□□□ -1.32
CHD2-216ENST00000629104 SMCO1Q147U7 214 aa6.8□□□□□ -1.32
CHD2-216ENST00000629104 RPEL1Q2QD12 228 aa6.8□□□□□ -1.32
CHD2-216ENST00000629104 C9orf66Q5T8R8 295 aa6.8□□□□□ -1.32
CHD2-216ENST00000629104 CLEC19AQ6UXS0 136 aa6.8□□□□□ -1.32
CHD2-216ENST00000629104 ZNF502Q8TBZ5 544 aa6.8□□□□□ -1.32
CHD2-216ENST00000629104 VN1R17PQ8TDU5 208 aa6.8□□□□□ -1.32
CHD2-216ENST00000629104 C20orf85Q9H1P6 137 aa6.8□□□□□ -1.32
CHD2-216ENST00000629104 NOTCH1P46531 2555 aa6.8□□□□□ -1.32
CHD2-216ENST00000629104 A0A1B0GU03 582 aa6.79□□□□□ -1.32
CHD2-216ENST00000629104 PPP5D1E7EU14 171 aa6.79□□□□□ -1.32
CHD2-216ENST00000629104 K7EIM0 57 aa6.79□□□□□ -1.32
CHD2-216ENST00000629104 GGCTO75223 188 aaKnown RBP6.79□□□□□ -1.32
CHD2-216ENST00000629104 ARL3P36405 182 aa6.79□□□□□ -1.32
CHD2-216ENST00000629104 SNCAP37840 140 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms