RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 TECRQ9NZ01 308 aaKnown RBP3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 CACNG5Q9UF02 275 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 SCN10AQ9Y5Y9 1956 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 TRAV13-1A0A0B4J241 112 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 FAM90A10PA6NDY2 464 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 HCRTO43612 131 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 HSPB1P04792 205 aaKnown RBP3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 MGST1P10620 155 aaKnown RBP3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 PTHLHP12272 177 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 CNTFRP26992 372 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 ZNF85Q03923 595 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 PARM1Q6UWI2 310 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 ADAT3Q96EY9 351 aaPredicted RBP3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 KCNS1Q96KK3 526 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 Q96MF0 132 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 SPANXDQ9BXN6 97 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 LINC00597Q9H2U6 94 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 PDCD11Q14690 1871 aaKnown RBP3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 PIKFYVEQ9Y2I7 2098 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 TRAV8-1A0A0A6YYK1 113 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 KNCNA6PVL3 124 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 E9PLN8 166 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 SLC17A2O00624 439 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 TIAF1O95411 115 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 GYPAP02724 150 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 OR9G9P0C7N8 305 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 TAF10Q12962 218 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 ZNF146Q15072 292 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 LY6KQ17RY6 165 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 UBE2E3Q969T4 207 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 PRDM6Q9NQX0 595 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 SLC39A9Q9NUM3 307 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 CES1P1Q9UKY3 287 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 TIMM8BQ9Y5J9 83 aaPredicted RBP3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 RALGAPA2Q2PPJ7 1873 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 TDRD15B5MCY1 1934 aaKnown RBP3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 MTCL1Q9Y4B5 1905 aaKnown RBP3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 CD300LBA8K4G0 201 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 RRHO14718 337 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 KBTBD11O94819 623 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 FCGR2CP31995 323 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 VEGFBP49765 207 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 HERVK_113P61574 105 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 RPS11P62280 158 aaKnown RBP eCLIP3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 RPS24P62847 133 aaKnown RBP3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 PRDX1Q06830 199 aaKnown RBP3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 RUNX3Q13761 415 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 DUSP5Q16690 384 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 FKBP1CQ5VVH2 108 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 LCN12Q6JVE5 192 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 C6orf201Q7Z4U5 140 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 SPEM1Q8N4L4 309 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 SSMEM1Q8WWF3 244 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 RND1Q92730 232 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 C20orf78Q9BR46 151 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 RPUSD1Q9UJJ7 312 aaKnown RBP3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 VSIG4Q9Y279 399 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 TEX50A0A1B0GTY4 177 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 A0A1W2PPM0 123 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 HMGN4O00479 90 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 SLC25A5P05141 298 aaKnown RBP3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 SMIM10L2AP0DMW4 78 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 SMIM10L2BP0DMW5 78 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 GP9P14770 177 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 KLRB1Q12918 225 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 KLF5Q13887 457 aaPredicted RBP3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 OR1C1Q15619 314 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 CEACAM16Q2WEN9 425 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 HLA-DQA1Q5Y7H0 255 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 Q6AWC8 147 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 ZNF627Q7L945 461 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 Q8TCH9 128 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 SCRT1Q9BWW7 348 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 PRSS22Q9GZN4 317 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 COMMD5Q9GZQ3 224 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 TMEM222Q9H0R3 208 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 HILPDAQ9Y5L2 63 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 SMIM35A0A1B0GVV1 85 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 MSGN1A6NI15 193 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 H3BVH4 76 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 PTGESO14684 152 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 CFPP27918 469 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 SUB1P53999 127 aaKnown RBP eCLIP3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 ERVK-16P61578 105 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 TNFAIP6P98066 277 aaPredicted RBP3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 GTF3C1Q12789 2109 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 SH2D6Q7Z4S9 175 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 ZNF563Q8TA94 476 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 PPDPFLQ8WWR9 84 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 SDF2Q99470 211 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 CXCL16Q9H2A7 254 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 PLEKHF2Q9H8W4 249 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 PILRAQ9UKJ1 303 aa3.25□□□□□ -1.89
R3HDM1-220ENST00000628915 CNTRLQ7Z7A1 2325 aa3.24□□□□□ -1.89
R3HDM1-220ENST00000628915 DOCK8Q8NF50 2099 aa3.24□□□□□ -1.89
R3HDM1-220ENST00000628915 IGLV3-10A0A075B6K4 115 aa3.24□□□□□ -1.89
R3HDM1-220ENST00000628915 LYRM9A8MSI8 78 aa3.24□□□□□ -1.89
R3HDM1-220ENST00000628915 H0YIZ8 118 aa3.24□□□□□ -1.89
R3HDM1-220ENST00000628915 CCL24O00175 119 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms