RNA–Protein interactions for RNA: ENST00000628306.2

CAPNS1-216, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-216ENST00000628306 CIB3Q96Q77 187 aaPredicted RBP18.96■□□□□ 0.63
CAPNS1-216ENST00000628306 TMEM140Q9NV12 185 aa18.96■□□□□ 0.63
CAPNS1-216ENST00000628306 BET1LQ9NYM9 111 aa18.96■□□□□ 0.63
CAPNS1-216ENST00000628306 SH2D7A6NKC9 451 aaPredicted RBP18.95■□□□□ 0.62
CAPNS1-216ENST00000628306 SPCS3P61009 180 aa18.95■□□□□ 0.62
CAPNS1-216ENST00000628306 EIF5AP63241 154 aaKnown RBP18.95■□□□□ 0.62
CAPNS1-216ENST00000628306 TPTE2P1Q5T6R2 138 aa18.95■□□□□ 0.62
CAPNS1-216ENST00000628306 OR8H3Q8N146 312 aa18.95■□□□□ 0.62
CAPNS1-216ENST00000628306 OR4A16Q8NH70 328 aa18.95■□□□□ 0.62
CAPNS1-216ENST00000628306 VSTM2AQ8TAG5 236 aa18.95■□□□□ 0.62
CAPNS1-216ENST00000628306 RPEQ96AT9 228 aa18.95■□□□□ 0.62
CAPNS1-216ENST00000628306 PHYHIPLQ96FC7 376 aa18.95■□□□□ 0.62
CAPNS1-216ENST00000628306 IGHV1-3A0A0C4DH29 117 aa18.94■□□□□ 0.62
CAPNS1-216ENST00000628306 SSSCA1O60232 199 aa18.94■□□□□ 0.62
CAPNS1-216ENST00000628306 TMEM50AO95807 157 aa18.94■□□□□ 0.62
CAPNS1-216ENST00000628306 IGKV1-16P04430 117 aa18.94■□□□□ 0.62
CAPNS1-216ENST00000628306 OR9G9P0C7N8 305 aa18.94■□□□□ 0.62
CAPNS1-216ENST00000628306 DIAPH2-AS1Q14236 149 aa18.94■□□□□ 0.62
CAPNS1-216ENST00000628306 OR4A47Q6IF82 309 aa18.94■□□□□ 0.62
CAPNS1-216ENST00000628306 PUSL1Q8N0Z8 303 aaKnown RBP18.94■□□□□ 0.62
CAPNS1-216ENST00000628306 TMEM252Q8N6L7 170 aa18.94■□□□□ 0.62
CAPNS1-216ENST00000628306 MAGT1Q9H0U3 335 aa18.94■□□□□ 0.62
CAPNS1-216ENST00000628306 FKBP11Q9NYL4 201 aa18.94■□□□□ 0.62
CAPNS1-216ENST00000628306 PRNDQ9UKY0 176 aa18.94■□□□□ 0.62
CAPNS1-216ENST00000628306 FOXA2Q9Y261 457 aaPredicted RBP18.94■□□□□ 0.62
CAPNS1-216ENST00000628306 ZNF257Q9Y2Q1 563 aa18.94■□□□□ 0.62
CAPNS1-216ENST00000628306 CD69Q07108 199 aa18.93■□□□□ 0.62
CAPNS1-216ENST00000628306 MRPL41Q8IXM3 137 aaKnown RBP18.93■□□□□ 0.62
CAPNS1-216ENST00000628306 CYTL1Q9NRR1 136 aa18.93■□□□□ 0.62
CAPNS1-216ENST00000628306 TMEM14BQ9NUH8 114 aa18.93■□□□□ 0.62
CAPNS1-216ENST00000628306 STAB2Q8WWQ8 2551 aa18.93■□□□□ 0.62
CAPNS1-216ENST00000628306 H7C2Y5 167 aa18.93■□□□□ 0.62
CAPNS1-216ENST00000628306 UPK2O00526 184 aa18.93■□□□□ 0.62
CAPNS1-216ENST00000628306 SHOXO15266 292 aa18.93■□□□□ 0.62
CAPNS1-216ENST00000628306 SCAF4O95104 1147 aaKnown RBP18.93■□□□□ 0.62
CAPNS1-216ENST00000628306 CD1BP29016 333 aa18.93■□□□□ 0.62
CAPNS1-216ENST00000628306 REG1BP48304 166 aa18.93■□□□□ 0.62
CAPNS1-216ENST00000628306 CCDC144NLQ6NUI1 221 aa18.93■□□□□ 0.62
CAPNS1-216ENST00000628306 RBM14Q96PK6 669 aaKnown RBP18.93■□□□□ 0.62
CAPNS1-216ENST00000628306 SLC25A33Q9BSK2 321 aa18.93■□□□□ 0.62
CAPNS1-216ENST00000628306 ZC4H2Q9NQZ6 224 aa18.93■□□□□ 0.62
CAPNS1-216ENST00000628306 C15orf61A6NNL5 157 aa18.92■□□□□ 0.62
CAPNS1-216ENST00000628306 SRRM4A7MD48 611 aaKnown RBP18.92■□□□□ 0.62
CAPNS1-216ENST00000628306 JTBO76095 146 aa18.92■□□□□ 0.62
CAPNS1-216ENST00000628306 OR4X2Q8NGF9 303 aa18.92■□□□□ 0.62
CAPNS1-216ENST00000628306 RBKSQ9H477 322 aa18.92■□□□□ 0.62
CAPNS1-216ENST00000628306 FAM24AA6NFZ4 105 aa18.91■□□□□ 0.62
CAPNS1-216ENST00000628306 CAV2P51636 162 aa18.91■□□□□ 0.62
CAPNS1-216ENST00000628306 HSPE1P61604 102 aaKnown RBP18.91■□□□□ 0.62
CAPNS1-216ENST00000628306 EWSR1Q01844 656 aaKnown RBP eCLIP18.91■□□□□ 0.62
CAPNS1-216ENST00000628306 TMEM167AQ8TBQ9 72 aa18.91■□□□□ 0.62
CAPNS1-216ENST00000628306 ST8SIA2Q92186 375 aa18.91■□□□□ 0.62
CAPNS1-216ENST00000628306 HARBI1Q96MB7 349 aa18.91■□□□□ 0.62
CAPNS1-216ENST00000628306 ZNF471Q9BX82 626 aaPredicted RBP18.91■□□□□ 0.62
CAPNS1-216ENST00000628306 A0A1W2PPI3 338 aa18.9■□□□□ 0.62
CAPNS1-216ENST00000628306 RBMXL2O75526 392 aaKnown RBP18.9■□□□□ 0.62
CAPNS1-216ENST00000628306 KBTBD11O94819 623 aa18.9■□□□□ 0.62
CAPNS1-216ENST00000628306 TPT1P13693 172 aaKnown RBP18.9■□□□□ 0.62
CAPNS1-216ENST00000628306 RPS16P62249 146 aaKnown RBP18.9■□□□□ 0.62
CAPNS1-216ENST00000628306 C18orf65Q6ZTR6 163 aa18.9■□□□□ 0.62
CAPNS1-216ENST00000628306 SSX9Q7RTT3 188 aa18.9■□□□□ 0.62
CAPNS1-216ENST00000628306 VKORC1L1Q8N0U8 176 aa18.9■□□□□ 0.62
CAPNS1-216ENST00000628306 STPG2Q8N412 459 aa18.9■□□□□ 0.62
CAPNS1-216ENST00000628306 TEX45Q8NA69 505 aa18.9■□□□□ 0.62
CAPNS1-216ENST00000628306 QTRT1Q9BXR0 403 aaKnown RBP18.9■□□□□ 0.62
CAPNS1-216ENST00000628306 PSENENQ9NZ42 101 aa18.9■□□□□ 0.62
CAPNS1-216ENST00000628306 UBQLN2Q9UHD9 624 aa18.9■□□□□ 0.62
CAPNS1-216ENST00000628306 CFDP00746 253 aaPredicted RBP18.89■□□□□ 0.61
CAPNS1-216ENST00000628306 SULT1A1P50225 295 aa18.89■□□□□ 0.61
CAPNS1-216ENST00000628306 ATP5IP56385 69 aaPredicted RBP18.89■□□□□ 0.61
CAPNS1-216ENST00000628306 NDUFA5Q16718 116 aa18.89■□□□□ 0.61
CAPNS1-216ENST00000628306 VMA21Q3ZAQ7 101 aa18.89■□□□□ 0.61
CAPNS1-216ENST00000628306 BAP18Q8IXM2 172 aa18.89■□□□□ 0.61
CAPNS1-216ENST00000628306 UBAC2Q8NBM4 344 aa18.89■□□□□ 0.61
CAPNS1-216ENST00000628306 OR5B3Q8NH48 314 aa18.89■□□□□ 0.61
CAPNS1-216ENST00000628306 DTD1Q8TEA8 209 aa18.89■□□□□ 0.61
CAPNS1-216ENST00000628306 IGSF23A1L1A6 192 aa18.88■□□□□ 0.61
CAPNS1-216ENST00000628306 IGLV2-23P01705 113 aa18.88■□□□□ 0.61
CAPNS1-216ENST00000628306 SAA1P0DJI8 122 aaPredicted RBP18.88■□□□□ 0.61
CAPNS1-216ENST00000628306 RPP30P78346 268 aaKnown RBP18.88■□□□□ 0.61
CAPNS1-216ENST00000628306 EXOSC2Q13868 293 aaKnown RBP18.88■□□□□ 0.61
CAPNS1-216ENST00000628306 KHDC1LQ5JSQ8 128 aa18.88■□□□□ 0.61
CAPNS1-216ENST00000628306 TMEM14EPQ6UXP3 125 aa18.88■□□□□ 0.61
CAPNS1-216ENST00000628306 MOB3BQ86TA1 216 aa18.88■□□□□ 0.61
CAPNS1-216ENST00000628306 STX12Q86Y82 276 aa18.88■□□□□ 0.61
CAPNS1-216ENST00000628306 SCARB1Q8WTV0 552 aa18.88■□□□□ 0.61
CAPNS1-216ENST00000628306 TSNAXQ99598 290 aaKnown RBP18.88■□□□□ 0.61
CAPNS1-216ENST00000628306 ARV1Q9H2C2 271 aa18.88■□□□□ 0.61
CAPNS1-216ENST00000628306 FBXL17Q9UF56 701 aa18.88■□□□□ 0.61
CAPNS1-216ENST00000628306 BORCS7-ASMTA0A0B4J1R7 106 aa18.87■□□□□ 0.61
CAPNS1-216ENST00000628306 INS-IGF2F8WCM5 200 aa18.87■□□□□ 0.61
CAPNS1-216ENST00000628306 IFNA17P01571 189 aa18.87■□□□□ 0.61
CAPNS1-216ENST00000628306 NHLH2Q02577 135 aa18.87■□□□□ 0.61
CAPNS1-216ENST00000628306 EIF5AL1Q6IS14 154 aaKnown RBP18.87■□□□□ 0.61
CAPNS1-216ENST00000628306 EPPK1P58107 5090 aaKnown RBP18.87■□□□□ 0.61
CAPNS1-216ENST00000628306 TRAV3A0A0B4J244 114 aa18.86■□□□□ 0.61
CAPNS1-216ENST00000628306 CEBPZOSA8MTT3 80 aa18.86■□□□□ 0.61
CAPNS1-216ENST00000628306 SPDEFO95238 335 aa18.86■□□□□ 0.61
CAPNS1-216ENST00000628306 BRS3P32247 399 aa18.86■□□□□ 0.61
CAPNS1-216ENST00000628306 CLCC1Q96S66 551 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms