RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 VAX2Q9UIW0 290 aa15.83■□□□□ 0.13
CHRNA4-209ENST00000627000 COLCA2A8K830 154 aa15.83■□□□□ 0.12
CHRNA4-209ENST00000627000 IGFBP2P18065 325 aa15.83■□□□□ 0.12
CHRNA4-209ENST00000627000 VMA21Q3ZAQ7 101 aa15.83■□□□□ 0.12
CHRNA4-209ENST00000627000 TEPPQ6URK8 271 aa15.83■□□□□ 0.12
CHRNA4-209ENST00000627000 WT1-ASQ06250 92 aa15.82■□□□□ 0.12
CHRNA4-209ENST00000627000 LOC105371242A0A075B767 164 aa15.82■□□□□ 0.12
CHRNA4-209ENST00000627000 hCG_1809904A0A1W2PP81 198 aa15.82■□□□□ 0.12
CHRNA4-209ENST00000627000 A0A1W2PPE2 198 aa15.82■□□□□ 0.12
CHRNA4-209ENST00000627000 A0A1W2PR64 198 aa15.82■□□□□ 0.12
CHRNA4-209ENST00000627000 A0A1W2PRV1 198 aa15.82■□□□□ 0.12
CHRNA4-209ENST00000627000 SEC14L6B5MCN3 397 aa15.82■□□□□ 0.12
CHRNA4-209ENST00000627000 IFNA1P01562 189 aa15.82■□□□□ 0.12
CHRNA4-209ENST00000627000 GPR6P46095 362 aaPredicted RBP15.82■□□□□ 0.12
CHRNA4-209ENST00000627000 A6NNC1 897 aa15.81■□□□□ 0.12
CHRNA4-209ENST00000627000 MT-ND4LP03901 98 aa15.81■□□□□ 0.12
CHRNA4-209ENST00000627000 LGALS7P47929 136 aa15.81■□□□□ 0.12
CHRNA4-209ENST00000627000 CD81P60033 236 aa15.81■□□□□ 0.12
CHRNA4-209ENST00000627000 KLRD1Q13241 179 aa15.81■□□□□ 0.12
CHRNA4-209ENST00000627000 PMS2P11Q13670 270 aa15.81■□□□□ 0.12
CHRNA4-209ENST00000627000 ZFP82Q8N141 532 aa15.81■□□□□ 0.12
CHRNA4-209ENST00000627000 IGFBPL1Q8WX77 278 aa15.81■□□□□ 0.12
CHRNA4-209ENST00000627000 ISOC2Q96AB3 205 aa15.81■□□□□ 0.12
CHRNA4-209ENST00000627000 RPEQ96AT9 228 aa15.81■□□□□ 0.12
CHRNA4-209ENST00000627000 NAV3Q8IVL0 2385 aa15.81■□□□□ 0.12
CHRNA4-209ENST00000627000 ACACBO00763 2458 aa15.81■□□□□ 0.12
CHRNA4-209ENST00000627000 LY6LH3BQJ8 138 aa15.8■□□□□ 0.12
CHRNA4-209ENST00000627000 ERHP84090 104 aaKnown RBP15.8■□□□□ 0.12
CHRNA4-209ENST00000627000 RHEBQ15382 184 aa15.8■□□□□ 0.12
CHRNA4-209ENST00000627000 RBMS3Q6XE24 437 aaKnown RBP15.8■□□□□ 0.12
CHRNA4-209ENST00000627000 TUBA4BQ9H853 241 aa15.8■□□□□ 0.12
CHRNA4-209ENST00000627000 CFAP46Q8IYW2 2715 aa15.8■□□□□ 0.12
CHRNA4-209ENST00000627000 IGKV1OR2-108A0A075B7D4 117 aa15.8■□□□□ 0.12
CHRNA4-209ENST00000627000 UBE2CO00762 179 aa15.8■□□□□ 0.12
CHRNA4-209ENST00000627000 HABP2Q14520 560 aaPredicted RBP15.8■□□□□ 0.12
CHRNA4-209ENST00000627000 STPG3Q8N7X2 389 aa15.8■□□□□ 0.12
CHRNA4-209ENST00000627000 IGSF10Q6WRI0 2623 aa15.79■□□□□ 0.12
CHRNA4-209ENST00000627000 A0A1W2PPV4 95 aa15.79■□□□□ 0.12
CHRNA4-209ENST00000627000 MEF2BQ02080 365 aaPredicted RBP15.79■□□□□ 0.12
CHRNA4-209ENST00000627000 GAMTQ14353 236 aa15.79■□□□□ 0.12
CHRNA4-209ENST00000627000 SLC35E3Q7Z769 313 aa15.79■□□□□ 0.12
CHRNA4-209ENST00000627000 P2RX4Q99571 388 aa15.79■□□□□ 0.12
CHRNA4-209ENST00000627000 AMMECR1Q9Y4X0 333 aaPredicted RBP15.79■□□□□ 0.12
CHRNA4-209ENST00000627000 AKAP6Q13023 2319 aa15.79■□□□□ 0.12
CHRNA4-209ENST00000627000 A0A1W2PN81 502 aa15.79■□□□□ 0.12
CHRNA4-209ENST00000627000 A0A1W2PPI3 338 aa15.79■□□□□ 0.12
CHRNA4-209ENST00000627000 INS-IGF2F8WCM5 200 aa15.79■□□□□ 0.12
CHRNA4-209ENST00000627000 CRYGBP07316 175 aa15.79■□□□□ 0.12
CHRNA4-209ENST00000627000 CHRNA7P36544 502 aa15.79■□□□□ 0.12
CHRNA4-209ENST00000627000 SNRPEP62304 92 aaKnown RBP15.79■□□□□ 0.12
CHRNA4-209ENST00000627000 NIPSNAP3BQ9BS92 247 aa15.79■□□□□ 0.12
CHRNA4-209ENST00000627000 C5orf52A6NGY3 159 aa15.78■□□□□ 0.12
CHRNA4-209ENST00000627000 FNDC10F2Z333 226 aa15.78■□□□□ 0.12
CHRNA4-209ENST00000627000 SOX15O60248 233 aa15.78■□□□□ 0.12
CHRNA4-209ENST00000627000 PAGE4O60829 102 aa15.78■□□□□ 0.12
CHRNA4-209ENST00000627000 REG1AP05451 166 aa15.78■□□□□ 0.12
CHRNA4-209ENST00000627000 ZFP36P26651 326 aaKnown RBP15.78■□□□□ 0.12
CHRNA4-209ENST00000627000 PSMB3P49720 205 aa15.78■□□□□ 0.12
CHRNA4-209ENST00000627000 CD69Q07108 199 aa15.78■□□□□ 0.12
CHRNA4-209ENST00000627000 PSG5Q15238 335 aa15.78■□□□□ 0.12
CHRNA4-209ENST00000627000 HCP5Q6MZN7 132 aa15.78■□□□□ 0.12
CHRNA4-209ENST00000627000 TMEM144Q7Z5S9 345 aa15.78■□□□□ 0.12
CHRNA4-209ENST00000627000 ABHD5Q8WTS1 349 aa15.78■□□□□ 0.12
CHRNA4-209ENST00000627000 TVP23CQ96ET8 276 aa15.78■□□□□ 0.12
CHRNA4-209ENST00000627000 A0A1W2PRD5 423 aa15.77■□□□□ 0.12
CHRNA4-209ENST00000627000 A0A1W2PRF3 423 aa15.77■□□□□ 0.12
CHRNA4-209ENST00000627000 A0A1W2PRM7 423 aa15.77■□□□□ 0.12
CHRNA4-209ENST00000627000 RPL29P47914 159 aaKnown RBP15.77■□□□□ 0.12
CHRNA4-209ENST00000627000 ATP5IP56385 69 aaPredicted RBP15.77■□□□□ 0.12
CHRNA4-209ENST00000627000 SPATA31B1PQ5VZV4 182 aa15.77■□□□□ 0.12
CHRNA4-209ENST00000627000 TEX45Q8NA69 505 aa15.77■□□□□ 0.12
CHRNA4-209ENST00000627000 HIST1H2BAQ96A08 127 aa15.77■□□□□ 0.12
CHRNA4-209ENST00000627000 FABP1P07148 127 aa15.77■□□□□ 0.11
CHRNA4-209ENST00000627000 LINC00869P0C866 280 aa15.77■□□□□ 0.11
CHRNA4-209ENST00000627000 EFNA4P52798 201 aa15.77■□□□□ 0.11
CHRNA4-209ENST00000627000 PRR20EP86478 221 aa15.77■□□□□ 0.11
CHRNA4-209ENST00000627000 PRR20CP86479 221 aa15.77■□□□□ 0.11
CHRNA4-209ENST00000627000 PRR20DP86480 221 aa15.77■□□□□ 0.11
CHRNA4-209ENST00000627000 PRR20BP86481 221 aa15.77■□□□□ 0.11
CHRNA4-209ENST00000627000 PRR20AP86496 221 aa15.77■□□□□ 0.11
CHRNA4-209ENST00000627000 RAB31Q13636 194 aa15.77■□□□□ 0.11
CHRNA4-209ENST00000627000 PRSS8Q16651 343 aa15.77■□□□□ 0.11
CHRNA4-209ENST00000627000 OR2T6Q8NHC8 308 aa15.77■□□□□ 0.11
CHRNA4-209ENST00000627000 MANBALQ9NQG1 85 aa15.77■□□□□ 0.11
CHRNA4-209ENST00000627000 METTL1Q9UBP6 276 aaKnown RBP15.77■□□□□ 0.11
CHRNA4-209ENST00000627000 ZNF727A8MUV8 499 aa15.76■□□□□ 0.11
CHRNA4-209ENST00000627000 M0R1W7 72 aa15.76■□□□□ 0.11
CHRNA4-209ENST00000627000 APELAP0DMC3 54 aa15.76■□□□□ 0.11
CHRNA4-209ENST00000627000 GATA2P23769 480 aaPredicted RBP15.76■□□□□ 0.11
CHRNA4-209ENST00000627000 TAGLN2P37802 199 aaKnown RBP15.76■□□□□ 0.11
CHRNA4-209ENST00000627000 TNXAQ16473 311 aa15.76■□□□□ 0.11
CHRNA4-209ENST00000627000 TPTE2P1Q5T6R2 138 aa15.76■□□□□ 0.11
CHRNA4-209ENST00000627000 LHFPL4Q7Z7J7 247 aa15.76■□□□□ 0.11
CHRNA4-209ENST00000627000 OR11H6Q8NGC7 330 aa15.76■□□□□ 0.11
CHRNA4-209ENST00000627000 NANPQ8TBE9 248 aa15.76■□□□□ 0.11
CHRNA4-209ENST00000627000 SEPSECSQ9HD40 501 aaKnown RBP15.76■□□□□ 0.11
CHRNA4-209ENST00000627000 KCNIP2Q9NS61 270 aa15.76■□□□□ 0.11
CHRNA4-209ENST00000627000 SLC45A2Q9UMX9 530 aa15.76■□□□□ 0.11
CHRNA4-209ENST00000627000 SIGLEC9Q9Y336 463 aa15.76■□□□□ 0.11
CHRNA4-209ENST00000627000 HILPDAQ9Y5L2 63 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms