RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 F11RQ9Y624 299 aaKnown RBP12.81□□□□□ -0.36
UBE3D-208ENST00000626828 A0A0B4J293 547 aa12.8□□□□□ -0.36
UBE3D-208ENST00000626828 CLEC3BP05452 202 aa12.8□□□□□ -0.36
UBE3D-208ENST00000626828 P0C879 139 aa12.8□□□□□ -0.36
UBE3D-208ENST00000626828 ERHP84090 104 aaKnown RBP12.8□□□□□ -0.36
UBE3D-208ENST00000626828 PRCDQ00LT1 54 aa12.8□□□□□ -0.36
UBE3D-208ENST00000626828 CLEC19AQ6UXS0 136 aa12.8□□□□□ -0.36
UBE3D-208ENST00000626828 FAM219AQ8IW50 185 aa12.8□□□□□ -0.36
UBE3D-208ENST00000626828 SRRQ9GZT4 340 aa12.8□□□□□ -0.36
UBE3D-208ENST00000626828 PEMTQ9UBM1 199 aa12.8□□□□□ -0.36
UBE3D-208ENST00000626828 OR2C1O95371 312 aa12.79□□□□□ -0.36
UBE3D-208ENST00000626828 IGHV3-23P01764 117 aa12.79□□□□□ -0.36
UBE3D-208ENST00000626828 ARL3P36405 182 aa12.79□□□□□ -0.36
UBE3D-208ENST00000626828 IZUMO4Q1ZYL8 232 aa12.79□□□□□ -0.36
UBE3D-208ENST00000626828 ZNF57Q68EA5 555 aaPredicted RBP12.79□□□□□ -0.36
UBE3D-208ENST00000626828 IL34Q6ZMJ4 242 aa12.79□□□□□ -0.36
UBE3D-208ENST00000626828 GPHB5Q86YW7 130 aa12.79□□□□□ -0.36
UBE3D-208ENST00000626828 SELENOHQ8IZQ5 122 aaKnown RBP12.79□□□□□ -0.36
UBE3D-208ENST00000626828 OR2C3Q8N628 320 aa12.79□□□□□ -0.36
UBE3D-208ENST00000626828 OR1P1Q8NH06 330 aa12.79□□□□□ -0.36
UBE3D-208ENST00000626828 RNASE11Q8TAA1 199 aaKnown RBP12.79□□□□□ -0.36
UBE3D-208ENST00000626828 RBPMSQ93062 196 aaKnown RBP12.79□□□□□ -0.36
UBE3D-208ENST00000626828 GALNT14Q96FL9 552 aa12.79□□□□□ -0.36
UBE3D-208ENST00000626828 SLC25A21Q9BQT8 299 aaPredicted RBP12.79□□□□□ -0.36
UBE3D-208ENST00000626828 PDCD10Q9BUL8 212 aa12.79□□□□□ -0.36
UBE3D-208ENST00000626828 SIGLEC8Q9NYZ4 499 aa12.79□□□□□ -0.36
UBE3D-208ENST00000626828 S4R3C0 116 aa12.79□□□□□ -0.36
UBE3D-208ENST00000626828 PRKDCP78527 4128 aaKnown RBP12.79□□□□□ -0.36
UBE3D-208ENST00000626828 PPP5D1E7EU14 171 aa12.78□□□□□ -0.36
UBE3D-208ENST00000626828 IFNA17P01571 189 aa12.78□□□□□ -0.36
UBE3D-208ENST00000626828 AKR1C4P17516 323 aa12.78□□□□□ -0.36
UBE3D-208ENST00000626828 INPP1P49441 399 aa12.78□□□□□ -0.36
UBE3D-208ENST00000626828 FAM106AQ4KMX7 169 aa12.78□□□□□ -0.36
UBE3D-208ENST00000626828 ZNF502Q8TBZ5 544 aa12.78□□□□□ -0.36
UBE3D-208ENST00000626828 CCDC140Q96MF4 163 aa12.78□□□□□ -0.36
UBE3D-208ENST00000626828 PRR25Q96S07 402 aa12.78□□□□□ -0.36
UBE3D-208ENST00000626828 PLEKHA3Q9HB20 300 aa12.78□□□□□ -0.36
UBE3D-208ENST00000626828 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.78□□□□□ -0.36
UBE3D-208ENST00000626828 TMEM56-RWDD3S4R434 201 aa12.78□□□□□ -0.36
UBE3D-208ENST00000626828 MFSD2BA6NFX1 497 aa12.77□□□□□ -0.37
UBE3D-208ENST00000626828 LGALS9O00182 355 aa12.77□□□□□ -0.37
UBE3D-208ENST00000626828 ST8SIA3O43173 380 aa12.77□□□□□ -0.37
UBE3D-208ENST00000626828 LY86O95711 162 aa12.77□□□□□ -0.37
UBE3D-208ENST00000626828 IGLV1-51P01701 117 aa12.77□□□□□ -0.37
UBE3D-208ENST00000626828 CSN3P07498 182 aa12.77□□□□□ -0.37
UBE3D-208ENST00000626828 SPNP16150 400 aa12.77□□□□□ -0.37
UBE3D-208ENST00000626828 MFAP2P55001 183 aa12.77□□□□□ -0.37
UBE3D-208ENST00000626828 TMEM268Q5VZI3 342 aa12.77□□□□□ -0.37
UBE3D-208ENST00000626828 LHFPL5Q8TAF8 219 aa12.77□□□□□ -0.37
UBE3D-208ENST00000626828 IL22RA2Q969J5 263 aa12.77□□□□□ -0.37
UBE3D-208ENST00000626828 TMEM230Q96A57 120 aa12.77□□□□□ -0.37
UBE3D-208ENST00000626828 ATP6V0BQ99437 205 aa12.77□□□□□ -0.37
UBE3D-208ENST00000626828 PIGBOS1A0A0B4J2F0 54 aa12.76□□□□□ -0.37
UBE3D-208ENST00000626828 NAP1L6A6NFF2 107 aa12.76□□□□□ -0.37
UBE3D-208ENST00000626828 INS-IGF2F8WCM5 200 aa12.76□□□□□ -0.37
UBE3D-208ENST00000626828 HLA-AP01891 365 aaKnown RBP12.76□□□□□ -0.37
UBE3D-208ENST00000626828 ANXA3P12429 323 aa12.76□□□□□ -0.37
UBE3D-208ENST00000626828 SNCAP37840 140 aa12.76□□□□□ -0.37
UBE3D-208ENST00000626828 TMEM187Q14656 261 aa12.76□□□□□ -0.37
UBE3D-208ENST00000626828 BAK1Q16611 211 aa12.76□□□□□ -0.37
UBE3D-208ENST00000626828 TRIQKQ629K1 86 aa12.76□□□□□ -0.37
UBE3D-208ENST00000626828 PLET1Q6UQ28 207 aa12.76□□□□□ -0.37
UBE3D-208ENST00000626828 Q6ZRM9 215 aa12.76□□□□□ -0.37
UBE3D-208ENST00000626828 SLC35G3Q8N808 338 aa12.76□□□□□ -0.37
UBE3D-208ENST00000626828 SCARB1Q8WTV0 552 aa12.76□□□□□ -0.37
UBE3D-208ENST00000626828 LSM4Q9Y4Z0 139 aaKnown RBP12.76□□□□□ -0.37
UBE3D-208ENST00000626828 A0A0G2JRQ6 117 aa12.75□□□□□ -0.37
UBE3D-208ENST00000626828 SUB1P53999 127 aaKnown RBP eCLIP12.75□□□□□ -0.37
UBE3D-208ENST00000626828 TMEM128Q5BJH2 165 aa12.75□□□□□ -0.37
UBE3D-208ENST00000626828 ZNF114Q8NC26 417 aa12.75□□□□□ -0.37
UBE3D-208ENST00000626828 OR52E5Q8NH55 327 aa12.75□□□□□ -0.37
UBE3D-208ENST00000626828 GPR146Q96CH1 333 aa12.75□□□□□ -0.37
UBE3D-208ENST00000626828 ENY2Q9NPA8 101 aa12.75□□□□□ -0.37
UBE3D-208ENST00000626828 GAR1Q9NY12 217 aaKnown RBP12.75□□□□□ -0.37
UBE3D-208ENST00000626828 C21orf62Q9NYP8 219 aa12.75□□□□□ -0.37
UBE3D-208ENST00000626828 CACFD1Q9UGQ2 172 aa12.75□□□□□ -0.37
UBE3D-208ENST00000626828 ZNF320A2RRD8 509 aa12.74□□□□□ -0.37
UBE3D-208ENST00000626828 K7EIM0 57 aa12.74□□□□□ -0.37
UBE3D-208ENST00000626828 GP9P14770 177 aa12.74□□□□□ -0.37
UBE3D-208ENST00000626828 GPR183P32249 361 aa12.74□□□□□ -0.37
UBE3D-208ENST00000626828 SPCS3P61009 180 aa12.74□□□□□ -0.37
UBE3D-208ENST00000626828 SUPT4H1P63272 117 aaKnown RBP12.74□□□□□ -0.37
UBE3D-208ENST00000626828 SRPXP78539 464 aa12.74□□□□□ -0.37
UBE3D-208ENST00000626828 AARDQ4LEZ3 155 aa12.74□□□□□ -0.37
UBE3D-208ENST00000626828 SPSB3Q6PJ21 355 aa12.74□□□□□ -0.37
UBE3D-208ENST00000626828 TMED4Q7Z7H5 227 aa12.74□□□□□ -0.37
UBE3D-208ENST00000626828 LGI3Q8N145 548 aa12.74□□□□□ -0.37
UBE3D-208ENST00000626828 IGHV3-21A0A0B4J1V1 117 aa12.73□□□□□ -0.37
UBE3D-208ENST00000626828 A0A0B4J2A0 478 aa12.73□□□□□ -0.37
UBE3D-208ENST00000626828 CENPXA8MT69 81 aa12.73□□□□□ -0.37
UBE3D-208ENST00000626828 SPINK9Q5DT21 86 aa12.73□□□□□ -0.37
UBE3D-208ENST00000626828 OR2K2Q8NGT1 345 aa12.73□□□□□ -0.37
UBE3D-208ENST00000626828 MISP3Q96FF7 219 aa12.73□□□□□ -0.37
UBE3D-208ENST00000626828 BSCL2Q96G97 398 aaPredicted RBP12.73□□□□□ -0.37
UBE3D-208ENST00000626828 SDHCQ99643 169 aaPredicted RBP12.73□□□□□ -0.37
UBE3D-208ENST00000626828 TXN2Q99757 166 aa12.73□□□□□ -0.37
UBE3D-208ENST00000626828 PALMDQ9NP74 551 aa12.73□□□□□ -0.37
UBE3D-208ENST00000626828 CACNG5Q9UF02 275 aa12.73□□□□□ -0.37
UBE3D-208ENST00000626828 SHPKQ9UHJ6 478 aa12.73□□□□□ -0.37
UBE3D-208ENST00000626828 A6NHS1 94 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms