RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 GABRA6Q16445 453 aa3.44□□□□□ -1.86
PTP4A1-205ENST00000626021 TNXAQ16473 311 aa3.44□□□□□ -1.86
PTP4A1-205ENST00000626021 OCIAD2Q56VL3 154 aa3.44□□□□□ -1.86
PTP4A1-205ENST00000626021 ZNF766Q5HY98 468 aa3.44□□□□□ -1.86
PTP4A1-205ENST00000626021 IBA57Q5T440 356 aaKnown RBP3.44□□□□□ -1.86
PTP4A1-205ENST00000626021 FAM71F2Q6NXP2 309 aa3.44□□□□□ -1.86
PTP4A1-205ENST00000626021 EBLN2Q6P2I7 272 aa3.44□□□□□ -1.86
PTP4A1-205ENST00000626021 C12orf54Q6X4T0 127 aa3.44□□□□□ -1.86
PTP4A1-205ENST00000626021 PQLC2Q6ZP29 291 aa3.44□□□□□ -1.86
PTP4A1-205ENST00000626021 ATP5L2Q7Z4Y8 100 aa3.44□□□□□ -1.86
PTP4A1-205ENST00000626021 YRDCQ86U90 279 aaKnown RBP3.44□□□□□ -1.86
PTP4A1-205ENST00000626021 SPACA3Q8IXA5 215 aa3.44□□□□□ -1.86
PTP4A1-205ENST00000626021 NEUROG1Q92886 237 aa3.44□□□□□ -1.86
PTP4A1-205ENST00000626021 NINJ1Q92982 152 aa3.44□□□□□ -1.86
PTP4A1-205ENST00000626021 IGF2BP2-AS1Q96M15 143 aa3.44□□□□□ -1.86
PTP4A1-205ENST00000626021 OR2V2Q96R30 315 aa3.44□□□□□ -1.86
PTP4A1-205ENST00000626021 WNT10AQ9GZT5 417 aa3.44□□□□□ -1.86
PTP4A1-205ENST00000626021 MS4A6AQ9H2W1 248 aa3.44□□□□□ -1.86
PTP4A1-205ENST00000626021 SAP30LQ9HAJ7 183 aa3.44□□□□□ -1.86
PTP4A1-205ENST00000626021 DNAJC13O75165 2243 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 LINC00473A8K010 186 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 C21orf140B9A014 251 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 CIDEAO60543 219 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 HSBP1O75506 76 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 RBMXL2O75526 392 aaKnown RBP3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 TNFSF15O95150 251 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 HBZP02008 142 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 CCNOP22674 350 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 CRYBB3P26998 211 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 APOBEC3AP31941 199 aaPredicted RBP3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 CEACAM3P40198 252 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 VAMP3Q15836 100 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 KIAA1644Q3SXP7 199 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 CENPWQ5EE01 88 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 BVES-AS1Q5T3Y7 98 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 C6orf15Q6UXA7 325 aaPredicted RBP3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 OR4A16Q8NH70 328 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 ZNF596Q8TC21 504 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 CHCHD1Q96BP2 118 aaKnown RBP3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 GRAMD2BQ96HH9 432 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 PMCHL2Q9BQD1 86 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 TMEM70Q9BUB7 260 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 ARRDC1-AS1Q9H2J1 176 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 DEPPQ9NTK1 212 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 TECRQ9NZ01 308 aaKnown RBP3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 CUL9Q8IWT3 2517 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 OTOGLQ3ZCN5 2332 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 A0A1W2PNU3 283 aaPredicted RBP3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 M0R2Z0 102 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 FOXH1O75593 365 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 HAND1O96004 215 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 CGAP01215 116 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 OR5AL1P0C617 328 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 CA6P23280 308 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 TAS2R45P59539 299 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 RPS16P62249 146 aaKnown RBP3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 Q0VFX4 171 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 FOXF2Q12947 444 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 ETFRF1Q6IPR1 90 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 PRR27Q6MZM9 219 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 FAM214BQ7L5A3 538 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 FAM19A2Q8N3H0 131 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 STPG3Q8N7X2 389 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 NHLRC2Q8NBF2 726 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 OR52L2PQ8NGH6 319 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 SLC25A40Q8TBP6 338 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 VPS25Q9BRG1 176 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 MRPL32Q9BYC8 188 aaKnown RBP3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 HEYLQ9NQ87 328 aaPredicted RBP3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 TNFRSF19Q9NS68 423 aa3.43□□□□□ -1.86
PTP4A1-205ENST00000626021 TRAV34A0A0B4J273 112 aa3.42□□□□□ -1.86
PTP4A1-205ENST00000626021 A0A0G2JMM0 328 aa3.42□□□□□ -1.86
PTP4A1-205ENST00000626021 A0A1W2PPB8 328 aa3.42□□□□□ -1.86
PTP4A1-205ENST00000626021 OR4C46A6NHA9 309 aa3.42□□□□□ -1.86
PTP4A1-205ENST00000626021 KIR3DP1A8MWS1 328 aa3.42□□□□□ -1.86
PTP4A1-205ENST00000626021 IQCF6A8MYZ5 107 aa3.42□□□□□ -1.86
PTP4A1-205ENST00000626021 HSBP1L1C9JCN9 74 aa3.42□□□□□ -1.86
PTP4A1-205ENST00000626021 M0R1X1 148 aa3.42□□□□□ -1.86
PTP4A1-205ENST00000626021 CDX4O14627 284 aaPredicted RBP3.42□□□□□ -1.86
PTP4A1-205ENST00000626021 SMPD2O60906 423 aa3.42□□□□□ -1.86
PTP4A1-205ENST00000626021 NBEAP1P0C6P0 100 aa3.42□□□□□ -1.86
PTP4A1-205ENST00000626021 NTF3P20783 257 aa3.42□□□□□ -1.86
PTP4A1-205ENST00000626021 HSPE1P61604 102 aaKnown RBP3.42□□□□□ -1.86
PTP4A1-205ENST00000626021 HIST1H1AQ02539 215 aaPredicted RBP3.42□□□□□ -1.86
PTP4A1-205ENST00000626021 SLAQ13239 276 aa3.42□□□□□ -1.86
PTP4A1-205ENST00000626021 POU2AF1Q16633 256 aa3.42□□□□□ -1.86
PTP4A1-205ENST00000626021 CR1LQ2VPA4 569 aa3.42□□□□□ -1.86
PTP4A1-205ENST00000626021 WIPI1Q5MNZ9 446 aaPredicted RBP3.42□□□□□ -1.86
PTP4A1-205ENST00000626021 PRAMEF5Q5TYX0 476 aa3.42□□□□□ -1.86
PTP4A1-205ENST00000626021 PRAMEF6Q5VXH4 476 aa3.42□□□□□ -1.86
PTP4A1-205ENST00000626021 SPATA31B1PQ5VZV4 182 aa3.42□□□□□ -1.86
PTP4A1-205ENST00000626021 MRPL54Q6P161 138 aaKnown RBP3.42□□□□□ -1.86
PTP4A1-205ENST00000626021 SLC25A34Q6PIV7 304 aa3.42□□□□□ -1.86
PTP4A1-205ENST00000626021 Q6ZVH6 145 aa3.42□□□□□ -1.86
PTP4A1-205ENST00000626021 WDR86Q86TI4 376 aa3.42□□□□□ -1.86
PTP4A1-205ENST00000626021 ZNF808Q8N4W9 903 aaPredicted RBP3.42□□□□□ -1.86
PTP4A1-205ENST00000626021 ABHD3Q8WU67 409 aa3.42□□□□□ -1.86
PTP4A1-205ENST00000626021 DPF1Q92782 380 aa3.42□□□□□ -1.86
PTP4A1-205ENST00000626021 ZNF503Q96F45 646 aa3.42□□□□□ -1.86
PTP4A1-205ENST00000626021 TRIB1Q96RU8 372 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms