RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 PEF1Q9UBV8 284 aaKnown RBP9.27□□□□□ -0.93
VPS8-227ENST00000625842 COL11A2P13942 1736 aaPredicted RBP9.27□□□□□ -0.93
VPS8-227ENST00000625842 DICER1Q9UPY3 1922 aaKnown RBP9.27□□□□□ -0.93
VPS8-227ENST00000625842 TRAV8-7A0A075B6U6 113 aa9.26□□□□□ -0.93
VPS8-227ENST00000625842 IGHV1-69DA0A0B4J2H0 117 aa9.26□□□□□ -0.93
VPS8-227ENST00000625842 A0A1B0GW15 77 aa9.26□□□□□ -0.93
VPS8-227ENST00000625842 CD8AP01732 235 aa9.26□□□□□ -0.93
VPS8-227ENST00000625842 IGHV1-69P01742 117 aa9.26□□□□□ -0.93
VPS8-227ENST00000625842 HLA-DRB1P01911 266 aa9.26□□□□□ -0.93
VPS8-227ENST00000625842 CD7P09564 240 aa9.26□□□□□ -0.93
VPS8-227ENST00000625842 CGB7P0DN87 165 aa9.26□□□□□ -0.93
VPS8-227ENST00000625842 BRD3OSQ6XYD6 125 aa9.26□□□□□ -0.93
VPS8-227ENST00000625842 Q71RC1 249 aaPredicted RBP9.26□□□□□ -0.93
VPS8-227ENST00000625842 CIARTQ8N365 385 aaPredicted RBP9.26□□□□□ -0.93
VPS8-227ENST00000625842 LAMA4Q16363 1823 aa9.26□□□□□ -0.93
VPS8-227ENST00000625842 SRRM5B3KS81 715 aa9.26□□□□□ -0.93
VPS8-227ENST00000625842 RAMP1O60894 148 aa9.26□□□□□ -0.93
VPS8-227ENST00000625842 EFNB2P52799 333 aa9.26□□□□□ -0.93
VPS8-227ENST00000625842 SLAQ13239 276 aa9.26□□□□□ -0.93
VPS8-227ENST00000625842 C9orf66Q5T8R8 295 aa9.26□□□□□ -0.93
VPS8-227ENST00000625842 WDR82Q6UXN9 313 aa9.26□□□□□ -0.93
VPS8-227ENST00000625842 TMEM86BQ8N661 226 aa9.26□□□□□ -0.93
VPS8-227ENST00000625842 VN1R17PQ8TDU5 208 aa9.26□□□□□ -0.93
VPS8-227ENST00000625842 TDRD15B5MCY1 1934 aaKnown RBP9.26□□□□□ -0.93
VPS8-227ENST00000625842 FER1L6Q2WGJ9 1857 aa9.26□□□□□ -0.93
VPS8-227ENST00000625842 NBEAP1P0C6P0 100 aa9.26□□□□□ -0.93
VPS8-227ENST00000625842 PSMG4Q5JS54 123 aa9.26□□□□□ -0.93
VPS8-227ENST00000625842 LINC00305Q7Z4B0 112 aa9.26□□□□□ -0.93
VPS8-227ENST00000625842 OR4C5Q8NGB2 326 aa9.26□□□□□ -0.93
VPS8-227ENST00000625842 C18orf12Q96KH6 178 aa9.26□□□□□ -0.93
VPS8-227ENST00000625842 CIDEAO60543 219 aa9.26□□□□□ -0.93
VPS8-227ENST00000625842 RNASE4P34096 147 aaKnown RBP9.26□□□□□ -0.93
VPS8-227ENST00000625842 ICAM4Q14773 271 aa9.26□□□□□ -0.93
VPS8-227ENST00000625842 SPSB4Q96A44 273 aa9.26□□□□□ -0.93
VPS8-227ENST00000625842 HDHD3Q9BSH5 251 aaPredicted RBP9.26□□□□□ -0.93
VPS8-227ENST00000625842 RNF167Q9H6Y7 350 aa9.26□□□□□ -0.93
VPS8-227ENST00000625842 HMSDA8MTL9 139 aa9.25□□□□□ -0.93
VPS8-227ENST00000625842 NDUFB8O95169 186 aa9.25□□□□□ -0.93
VPS8-227ENST00000625842 IGHV1-8P0DP01 117 aa9.25□□□□□ -0.93
VPS8-227ENST00000625842 RPL35AP18077 110 aaKnown RBP9.25□□□□□ -0.93
VPS8-227ENST00000625842 CRYBA2P53672 197 aa9.25□□□□□ -0.93
VPS8-227ENST00000625842 RPS11P62280 158 aaKnown RBP eCLIP9.25□□□□□ -0.93
VPS8-227ENST00000625842 IBA57Q5T440 356 aaKnown RBP9.25□□□□□ -0.93
VPS8-227ENST00000625842 GOLT1AQ6ZVE7 132 aa9.25□□□□□ -0.93
VPS8-227ENST00000625842 POLEQ07864 2286 aa9.25□□□□□ -0.93
VPS8-227ENST00000625842 CENPVL1A0A0U1RR11 272 aa9.25□□□□□ -0.93
VPS8-227ENST00000625842 CTSBP07858 339 aa9.25□□□□□ -0.93
VPS8-227ENST00000625842 EDA2RQ9HAV5 297 aa9.25□□□□□ -0.93
VPS8-227ENST00000625842 RPL39P5Q59GN2 51 aa9.25□□□□□ -0.93
VPS8-227ENST00000625842 MRPL54Q6P161 138 aaKnown RBP9.25□□□□□ -0.93
VPS8-227ENST00000625842 SMIM12Q96EX1 92 aa9.25□□□□□ -0.93
VPS8-227ENST00000625842 TOMM7Q9P0U1 55 aa9.25□□□□□ -0.93
VPS8-227ENST00000625842 SIPA1L3O60292 1781 aaPredicted RBP9.25□□□□□ -0.93
VPS8-227ENST00000625842 IGHV3-23P01764 117 aa9.25□□□□□ -0.93
VPS8-227ENST00000625842 MST1P26927 711 aa9.25□□□□□ -0.93
VPS8-227ENST00000625842 FAM90A2PQ658T7 463 aa9.25□□□□□ -0.93
VPS8-227ENST00000625842 TMEM37Q8WXS4 190 aa9.25□□□□□ -0.93
VPS8-227ENST00000625842 KCNE5Q9UJ90 142 aa9.25□□□□□ -0.93
VPS8-227ENST00000625842 TDRD6O60522 2096 aaKnown RBP9.25□□□□□ -0.93
VPS8-227ENST00000625842 TRBV20OR9-2A0A075B6H5 130 aa9.24□□□□□ -0.93
VPS8-227ENST00000625842 M0R381 172 aa9.24□□□□□ -0.93
VPS8-227ENST00000625842 ELANEP08246 267 aa9.24□□□□□ -0.93
VPS8-227ENST00000625842 C9orf139Q6ZV77 190 aa9.24□□□□□ -0.93
VPS8-227ENST00000625842 CYB561D1Q8N8Q1 229 aa9.24□□□□□ -0.93
VPS8-227ENST00000625842 TSSC4Q9Y5U2 329 aaPredicted RBP9.24□□□□□ -0.93
VPS8-227ENST00000625842 IGKV1D-42A0A075B6H8 117 aa9.24□□□□□ -0.93
VPS8-227ENST00000625842 TRAV24A0A0B4J272 114 aa9.24□□□□□ -0.93
VPS8-227ENST00000625842 F8WEM9 126 aa9.24□□□□□ -0.93
VPS8-227ENST00000625842 SIGLEC15Q6ZMC9 328 aa9.24□□□□□ -0.93
VPS8-227ENST00000625842 DLX4Q92988 240 aaPredicted RBP9.24□□□□□ -0.93
VPS8-227ENST00000625842 RNF125Q96EQ8 232 aa9.24□□□□□ -0.93
VPS8-227ENST00000625842 NOTCH2Q04721 2471 aa9.24□□□□□ -0.93
VPS8-227ENST00000625842 ATP5LO75964 103 aa9.24□□□□□ -0.93
VPS8-227ENST00000625842 CELA3BP08861 270 aa9.24□□□□□ -0.93
VPS8-227ENST00000625842 DMRTC2Q8IXT2 367 aaPredicted RBP9.24□□□□□ -0.93
VPS8-227ENST00000625842 ARFGEF1Q9Y6D6 1849 aa9.24□□□□□ -0.93
VPS8-227ENST00000625842 ADARB2-AS1A8MUL3 147 aa9.24□□□□□ -0.93
VPS8-227ENST00000625842 FABP5P3A8MUU1 101 aa9.24□□□□□ -0.93
VPS8-227ENST00000625842 LINC00271P0C7V0 271 aa9.24□□□□□ -0.93
VPS8-227ENST00000625842 UBE2V2Q15819 145 aa9.24□□□□□ -0.93
VPS8-227ENST00000625842 MIC13Q5XKP0 118 aa9.24□□□□□ -0.93
VPS8-227ENST00000625842 OR8A1Q8NGG7 326 aa9.24□□□□□ -0.93
VPS8-227ENST00000625842 GPR146Q96CH1 333 aa9.24□□□□□ -0.93
VPS8-227ENST00000625842 GPR132Q9UNW8 380 aa9.24□□□□□ -0.93
VPS8-227ENST00000625842 SEC11AP67812 179 aa9.23□□□□□ -0.93
VPS8-227ENST00000625842 MST1LQ2TV78 715 aa9.23□□□□□ -0.93
VPS8-227ENST00000625842 TMEM252Q8N6L7 170 aa9.23□□□□□ -0.93
VPS8-227ENST00000625842 SRSF8Q9BRL6 282 aaKnown RBP9.23□□□□□ -0.93
VPS8-227ENST00000625842 HLA-DQA1P01909 254 aa9.23□□□□□ -0.93
VPS8-227ENST00000625842 RNASE1P07998 156 aaKnown RBP9.23□□□□□ -0.93
VPS8-227ENST00000625842 IL36RNQ9UBH0 155 aa9.23□□□□□ -0.93
VPS8-227ENST00000625842 TGIF2-C20orf24A0A0A6YYL0 155 aa9.23□□□□□ -0.93
VPS8-227ENST00000625842 IGHV3-66A0A0C4DH42 116 aa9.23□□□□□ -0.93
VPS8-227ENST00000625842 A6NDN8 102 aa9.23□□□□□ -0.93
VPS8-227ENST00000625842 FAM71F2Q6NXP2 309 aa9.23□□□□□ -0.93
VPS8-227ENST00000625842 DMRTA2Q96SC8 542 aa9.23□□□□□ -0.93
VPS8-227ENST00000625842 GPR179Q6PRD1 2367 aa9.23□□□□□ -0.93
VPS8-227ENST00000625842 THADAQ6YHU6 1953 aa9.23□□□□□ -0.93
VPS8-227ENST00000625842 TAF1LQ8IZX4 1826 aa9.23□□□□□ -0.93
VPS8-227ENST00000625842 C5orf64Q2M2E5 130 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms