RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 CXorf58Q96LI9 332 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 TMEM56Q96MV1 263 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 ABHD1Q96SE0 405 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 C6orf62Q9GZU0 229 aaPredicted RBP4.89□□□□□ -1.63
TCF4-249ENST00000625716 FAM212BQ9NTI7 297 aaPredicted RBP4.89□□□□□ -1.63
TCF4-249ENST00000625716 CCDC59Q9P031 241 aaKnown RBP4.89□□□□□ -1.63
TCF4-249ENST00000625716 MTFP1Q9UDX5 166 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 OR51B2Q9Y5P1 312 aa4.89□□□□□ -1.63
TCF4-249ENST00000625716 NOTCH3Q9UM47 2321 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 TEX50A0A1B0GTY4 177 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 ZNF320A2RRD8 509 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 DISC1C4P0D8 188 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 PPP5D1E7EU14 171 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 E7EUB6 86 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 GABARAPH6UMI1 98 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 NDUFB8O95169 186 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 IGLV1-51P01701 117 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 IGHV3-23P01764 117 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 OR13C7P0DN81 318 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 MYOD1P15172 320 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 CTRB1P17538 263 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 ARL3P36405 182 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 MEF2DQ14814 521 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 CTRB2Q6GPI1 263 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 LCN12Q6JVE5 192 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 SLC25A24Q6NUK1 477 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 STEAP1BQ6NZ63 245 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 C19orf35Q6ZS72 473 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 GTSCR1Q86UQ5 136 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 HAPLN4Q86UW8 402 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 SGPP2Q8IWX5 399 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 CADM3Q8N126 398 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 Q8N402 240 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 OR1L6Q8NGR2 347 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 OR5B3Q8NH48 314 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 TERB2Q8NHR7 220 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 RNASE11Q8TAA1 199 aaKnown RBP4.88□□□□□ -1.63
TCF4-249ENST00000625716 DYNLRB2Q8TF09 96 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 LSM10Q969L4 123 aaKnown RBP4.88□□□□□ -1.63
TCF4-249ENST00000625716 COPZ2Q9P299 210 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 RSL24D1Q9UHA3 163 aaKnown RBP4.88□□□□□ -1.63
TCF4-249ENST00000625716 C14orf166Q9Y224 244 aaKnown RBP4.88□□□□□ -1.63
TCF4-249ENST00000625716 NSG2Q9Y328 171 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 LSM4Q9Y4Z0 139 aaKnown RBP4.88□□□□□ -1.63
TCF4-249ENST00000625716 S4R3C0 116 aa4.88□□□□□ -1.63
TCF4-249ENST00000625716 IGLV11-55A0A075B6I3 123 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 C3orf85A0A1B0GTC6 90 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 A0A1B0GW64 132 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 IGLC7A0M8Q6 106 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 FABP12A6NFH5 140 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 H3BMQ9 156 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 BMPR1BO00238 502 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 CTDSPLO15194 276 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 B3GALNT1O75752 331 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 OR2C1O95371 312 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 CLEC3BP05452 202 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 CSN3P07498 182 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 AKAIN1P0CW23 69 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 PTBP1P26599 531 aaKnown RBP eCLIP4.87□□□□□ -1.634e-7■■■■■ 33.4
TCF4-249ENST00000625716 AKR1C2P52895 323 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 PPP5CP53041 499 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 PIGPP57054 158 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 RND3P61587 244 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 TRIM16LQ309B1 348 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 ZNF585BQ52M93 769 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 PLET1Q6UQ28 207 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 GDPD1Q8N9F7 314 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 OR10W1Q8NGF6 305 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 OR2K2Q8NGT1 345 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 MCFD2Q8NI22 146 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 DYNC2LI1Q8TCX1 351 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 ISOC1Q96CN7 298 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 ASCL2Q99929 193 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 PDCD10Q9BUL8 212 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 MIXL1Q9H2W2 232 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 PALMDQ9NP74 551 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 NDUFA4L2Q9NRX3 87 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 SIGLEC8Q9NYZ4 499 aa4.87□□□□□ -1.63
TCF4-249ENST00000625716 TEX13DA0A0J9YY54 714 aaPredicted RBP4.86□□□□□ -1.63
TCF4-249ENST00000625716 CGB1A6NKQ9 187 aa4.86□□□□□ -1.63
TCF4-249ENST00000625716 C15orf61A6NNL5 157 aa4.86□□□□□ -1.63
TCF4-249ENST00000625716 LGALS9O00182 355 aa4.86□□□□□ -1.63
TCF4-249ENST00000625716 HLA-AP01891 365 aaKnown RBP4.86□□□□□ -1.63
TCF4-249ENST00000625716 CD74P04233 296 aa4.86□□□□□ -1.63
TCF4-249ENST00000625716 CTSDP07339 412 aaPredicted RBP4.86□□□□□ -1.63
TCF4-249ENST00000625716 GPR183P32249 361 aa4.86□□□□□ -1.63
TCF4-249ENST00000625716 S100A5P33763 92 aa4.86□□□□□ -1.63
TCF4-249ENST00000625716 HSPE1P61604 102 aaKnown RBP4.86□□□□□ -1.63
TCF4-249ENST00000625716 ERHP84090 104 aaKnown RBP4.86□□□□□ -1.63
TCF4-249ENST00000625716 WT1-ASQ06250 92 aa4.86□□□□□ -1.63
TCF4-249ENST00000625716 SURF2Q15527 256 aaPredicted RBP4.86□□□□□ -1.63
TCF4-249ENST00000625716 Q56UQ5 140 aa4.86□□□□□ -1.63
TCF4-249ENST00000625716 IL34Q6ZMJ4 242 aa4.86□□□□□ -1.63
TCF4-249ENST00000625716 LHFPL1Q86WI0 220 aa4.86□□□□□ -1.63
TCF4-249ENST00000625716 GPHB5Q86YW7 130 aa4.86□□□□□ -1.63
TCF4-249ENST00000625716 UBAC2Q8NBM4 344 aa4.86□□□□□ -1.63
TCF4-249ENST00000625716 OR4D10Q8NGI6 311 aa4.86□□□□□ -1.63
TCF4-249ENST00000625716 OR13C8Q8NGS7 320 aa4.86□□□□□ -1.63
TCF4-249ENST00000625716 MARCH1Q8TCQ1 289 aa4.86□□□□□ -1.63
TCF4-249ENST00000625716 VN1R17PQ8TDU5 208 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms