RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 HSPE1P61604 102 aaKnown RBP10.71□□□□□ -0.69
PCDHGC3-208ENST00000622836 TMED4Q7Z7H5 227 aa10.71□□□□□ -0.69
PCDHGC3-208ENST00000622836 SLC35G3Q8N808 338 aa10.71□□□□□ -0.69
PCDHGC3-208ENST00000622836 OR9G4Q8NGQ1 327 aa10.71□□□□□ -0.69
PCDHGC3-208ENST00000622836 PRR25Q96S07 402 aa10.71□□□□□ -0.69
PCDHGC3-208ENST00000622836 PLEKHA3Q9HB20 300 aa10.71□□□□□ -0.69
PCDHGC3-208ENST00000622836 ZNF256Q9Y2P7 627 aaPredicted RBP10.71□□□□□ -0.69
PCDHGC3-208ENST00000622836 F11RQ9Y624 299 aaKnown RBP10.71□□□□□ -0.69
PCDHGC3-208ENST00000622836 TGP01266 2768 aa10.7□□□□□ -0.7
PCDHGC3-208ENST00000622836 MFSD2BA6NFX1 497 aa10.7□□□□□ -0.7
PCDHGC3-208ENST00000622836 GGCTO75223 188 aaKnown RBP10.7□□□□□ -0.7
PCDHGC3-208ENST00000622836 CDS2O95674 445 aa10.7□□□□□ -0.7
PCDHGC3-208ENST00000622836 HLA-AP01891 365 aaKnown RBP10.7□□□□□ -0.7
PCDHGC3-208ENST00000622836 ERHP84090 104 aaKnown RBP10.7□□□□□ -0.7
PCDHGC3-208ENST00000622836 PRCDQ00LT1 54 aa10.7□□□□□ -0.7
PCDHGC3-208ENST00000622836 SPINK9Q5DT21 86 aa10.7□□□□□ -0.7
PCDHGC3-208ENST00000622836 TMEM268Q5VZI3 342 aa10.7□□□□□ -0.7
PCDHGC3-208ENST00000622836 OR1L6Q8NGR2 347 aa10.7□□□□□ -0.7
PCDHGC3-208ENST00000622836 GLYATL2Q8WU03 294 aa10.7□□□□□ -0.7
PCDHGC3-208ENST00000622836 DEDD2Q8WXF8 326 aa10.7□□□□□ -0.7
PCDHGC3-208ENST00000622836 RBPMSQ93062 196 aaKnown RBP10.7□□□□□ -0.7
PCDHGC3-208ENST00000622836 CCDC140Q96MF4 163 aa10.7□□□□□ -0.7
PCDHGC3-208ENST00000622836 ENY2Q9NPA8 101 aa10.7□□□□□ -0.7
PCDHGC3-208ENST00000622836 PEMTQ9UBM1 199 aa10.7□□□□□ -0.7
PCDHGC3-208ENST00000622836 OR2C1O95371 312 aa10.69□□□□□ -0.7
PCDHGC3-208ENST00000622836 CLEC3BP05452 202 aa10.69□□□□□ -0.7
PCDHGC3-208ENST00000622836 ANXA3P12429 323 aa10.69□□□□□ -0.7
PCDHGC3-208ENST00000622836 HOXA1P49639 335 aaPredicted RBP10.69□□□□□ -0.7
PCDHGC3-208ENST00000622836 DCTN2Q13561 401 aaKnown RBP10.69□□□□□ -0.7
PCDHGC3-208ENST00000622836 KLK9Q2XQG4 91 aa10.69□□□□□ -0.7
PCDHGC3-208ENST00000622836 HAPLN4Q86UW8 402 aa10.69□□□□□ -0.7
PCDHGC3-208ENST00000622836 FAM219AQ8IW50 185 aa10.69□□□□□ -0.7
PCDHGC3-208ENST00000622836 TMEM230Q96A57 120 aa10.69□□□□□ -0.7
PCDHGC3-208ENST00000622836 MISP3Q96FF7 219 aa10.69□□□□□ -0.7
PCDHGC3-208ENST00000622836 ZC4H2Q9NQZ6 224 aa10.69□□□□□ -0.7
PCDHGC3-208ENST00000622836 KLK9Q9UKQ9 250 aa10.69□□□□□ -0.7
PCDHGC3-208ENST00000622836 IGHV3-21A0A0B4J1V1 117 aa10.68□□□□□ -0.7
PCDHGC3-208ENST00000622836 A0A0B4J293 547 aa10.68□□□□□ -0.7
PCDHGC3-208ENST00000622836 A0A0G2JRQ6 117 aa10.68□□□□□ -0.7
PCDHGC3-208ENST00000622836 LINC00854A0A1B0GVQ3 168 aa10.68□□□□□ -0.7
PCDHGC3-208ENST00000622836 ST8SIA3O43173 380 aa10.68□□□□□ -0.7
PCDHGC3-208ENST00000622836 GPR183P32249 361 aa10.68□□□□□ -0.7
PCDHGC3-208ENST00000622836 SNCAP37840 140 aa10.68□□□□□ -0.7
PCDHGC3-208ENST00000622836 BAK1Q16611 211 aa10.68□□□□□ -0.7
PCDHGC3-208ENST00000622836 PLET1Q6UQ28 207 aa10.68□□□□□ -0.7
PCDHGC3-208ENST00000622836 SELENOHQ8IZQ5 122 aaKnown RBP10.68□□□□□ -0.7
PCDHGC3-208ENST00000622836 OR2C3Q8N628 320 aa10.68□□□□□ -0.7
PCDHGC3-208ENST00000622836 OR1P1Q8NH06 330 aa10.68□□□□□ -0.7
PCDHGC3-208ENST00000622836 LHFPL5Q8TAF8 219 aa10.68□□□□□ -0.7
PCDHGC3-208ENST00000622836 VN1R17PQ8TDU5 208 aa10.68□□□□□ -0.7
PCDHGC3-208ENST00000622836 SLC25A21Q9BQT8 299 aaPredicted RBP10.68□□□□□ -0.7
PCDHGC3-208ENST00000622836 DMRT1Q9Y5R6 373 aa10.68□□□□□ -0.7
PCDHGC3-208ENST00000622836 ZNF320A2RRD8 509 aa10.67□□□□□ -0.7
PCDHGC3-208ENST00000622836 P0C879 139 aa10.67□□□□□ -0.7
PCDHGC3-208ENST00000622836 SPNP16150 400 aa10.67□□□□□ -0.7
PCDHGC3-208ENST00000622836 TMEM187Q14656 261 aa10.67□□□□□ -0.7
PCDHGC3-208ENST00000622836 FAM106AQ4KMX7 169 aa10.67□□□□□ -0.7
PCDHGC3-208ENST00000622836 UBAC2Q8NBM4 344 aa10.67□□□□□ -0.7
PCDHGC3-208ENST00000622836 ZNF502Q8TBZ5 544 aa10.67□□□□□ -0.7
PCDHGC3-208ENST00000622836 GALNT14Q96FL9 552 aa10.67□□□□□ -0.7
PCDHGC3-208ENST00000622836 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.67□□□□□ -0.7
PCDHGC3-208ENST00000622836 C21orf62Q9NYP8 219 aa10.67□□□□□ -0.7
PCDHGC3-208ENST00000622836 PRR13Q9NZ81 148 aa10.67□□□□□ -0.7
PCDHGC3-208ENST00000622836 CACNG5Q9UF02 275 aa10.67□□□□□ -0.7
PCDHGC3-208ENST00000622836 SORL1Q92673 2214 aa10.67□□□□□ -0.7
PCDHGC3-208ENST00000622836 NAP1L6A6NFF2 107 aa10.66□□□□□ -0.7
PCDHGC3-208ENST00000622836 OR2T8A6NH00 312 aa10.66□□□□□ -0.7
PCDHGC3-208ENST00000622836 CENPXA8MT69 81 aa10.66□□□□□ -0.7
PCDHGC3-208ENST00000622836 VAMP1P23763 118 aa10.66□□□□□ -0.7
PCDHGC3-208ENST00000622836 MFAP2P55001 183 aa10.66□□□□□ -0.7
PCDHGC3-208ENST00000622836 SRPXP78539 464 aa10.66□□□□□ -0.7
PCDHGC3-208ENST00000622836 RBMS2Q15434 407 aaKnown RBP10.66□□□□□ -0.7
PCDHGC3-208ENST00000622836 Q56UQ5 140 aa10.66□□□□□ -0.7
PCDHGC3-208ENST00000622836 LGI3Q8N145 548 aa10.66□□□□□ -0.7
PCDHGC3-208ENST00000622836 DYNLRB2Q8TF09 96 aa10.66□□□□□ -0.7
PCDHGC3-208ENST00000622836 SCARB1Q8WTV0 552 aa10.66□□□□□ -0.7
PCDHGC3-208ENST00000622836 IL22RA2Q969J5 263 aa10.66□□□□□ -0.7
PCDHGC3-208ENST00000622836 PINX1Q96BK5 328 aaKnown RBP10.66□□□□□ -0.7
PCDHGC3-208ENST00000622836 GPR146Q96CH1 333 aa10.66□□□□□ -0.7
PCDHGC3-208ENST00000622836 TMEM56-RWDD3S4R434 201 aa10.66□□□□□ -0.7
PCDHGC3-208ENST00000622836 PRKDCP78527 4128 aaKnown RBP10.66□□□□□ -0.7
PCDHGC3-208ENST00000622836 PIGBOS1A0A0B4J2F0 54 aa10.65□□□□□ -0.7
PCDHGC3-208ENST00000622836 IGHV3-35A0A0C4DH35 117 aa10.65□□□□□ -0.7
PCDHGC3-208ENST00000622836 IGLV1-51P01701 117 aa10.65□□□□□ -0.7
PCDHGC3-208ENST00000622836 CSN3P07498 182 aa10.65□□□□□ -0.7
PCDHGC3-208ENST00000622836 GP9P14770 177 aa10.65□□□□□ -0.7
PCDHGC3-208ENST00000622836 CCR6P51684 374 aa10.65□□□□□ -0.7
PCDHGC3-208ENST00000622836 SUB1P53999 127 aaKnown RBP eCLIP10.65□□□□□ -0.7
PCDHGC3-208ENST00000622836 TMEM128Q5BJH2 165 aa10.65□□□□□ -0.7
PCDHGC3-208ENST00000622836 IL34Q6ZMJ4 242 aa10.65□□□□□ -0.7
PCDHGC3-208ENST00000622836 Q6ZRM9 215 aa10.65□□□□□ -0.7
PCDHGC3-208ENST00000622836 GPHB5Q86YW7 130 aa10.65□□□□□ -0.7
PCDHGC3-208ENST00000622836 CENPSQ8N2Z9 138 aa10.65□□□□□ -0.7
PCDHGC3-208ENST00000622836 ZNF114Q8NC26 417 aa10.65□□□□□ -0.7
PCDHGC3-208ENST00000622836 BSCL2Q96G97 398 aaPredicted RBP10.65□□□□□ -0.7
PCDHGC3-208ENST00000622836 A0A0B4J2A0 478 aa10.64□□□□□ -0.71
PCDHGC3-208ENST00000622836 CEBPZOSA8MTT3 80 aa10.64□□□□□ -0.71
PCDHGC3-208ENST00000622836 K7EIM0 57 aa10.64□□□□□ -0.71
PCDHGC3-208ENST00000622836 LGALS9O00182 355 aa10.64□□□□□ -0.71
PCDHGC3-208ENST00000622836 TGOLN2O43493 480 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms