RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 CACNA1GO43497 2377 aa13.49□□□□□ -0.25
GABRB3-215ENST00000622697 RIF1Q5UIP0 2472 aaKnown RBP13.49□□□□□ -0.25
GABRB3-215ENST00000622697 COMPP49747 757 aaPredicted RBP13.49□□□□□ -0.25
GABRB3-215ENST00000622697 LRTM2Q8N967 370 aa13.49□□□□□ -0.25
GABRB3-215ENST00000622697 OSR1Q8TAX0 266 aaPredicted RBP13.49□□□□□ -0.25
GABRB3-215ENST00000622697 PLXND1Q9Y4D7 1925 aa13.48□□□□□ -0.25
GABRB3-215ENST00000622697 COLCA2A8K830 154 aa13.48□□□□□ -0.25
GABRB3-215ENST00000622697 SS18L1O75177 396 aaPredicted RBP13.48□□□□□ -0.25
GABRB3-215ENST00000622697 LIPFP07098 398 aa13.48□□□□□ -0.25
GABRB3-215ENST00000622697 TUBA4BQ9H853 241 aa13.48□□□□□ -0.25
GABRB3-215ENST00000622697 A6NDN8 102 aa13.48□□□□□ -0.25
GABRB3-215ENST00000622697 HIST1H2BKO60814 126 aa13.48□□□□□ -0.25
GABRB3-215ENST00000622697 HIST1H2BJP06899 126 aa13.48□□□□□ -0.25
GABRB3-215ENST00000622697 CXCL1P09341 107 aa13.48□□□□□ -0.25
GABRB3-215ENST00000622697 HIST1H2BOP23527 126 aa13.48□□□□□ -0.25
GABRB3-215ENST00000622697 HIST1H2BBP33778 126 aa13.48□□□□□ -0.25
GABRB3-215ENST00000622697 HIST1H2BDP58876 126 aa13.48□□□□□ -0.25
GABRB3-215ENST00000622697 LINC00205P59089 165 aa13.48□□□□□ -0.25
GABRB3-215ENST00000622697 HIST1H2BCP62807 126 aa13.48□□□□□ -0.25
GABRB3-215ENST00000622697 HIST2H2BEQ16778 126 aa13.48□□□□□ -0.25
GABRB3-215ENST00000622697 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.48□□□□□ -0.25
GABRB3-215ENST00000622697 DGAT2L7PQ6IED9 249 aa13.48□□□□□ -0.25
GABRB3-215ENST00000622697 LHFPL4Q7Z7J7 247 aa13.48□□□□□ -0.25
GABRB3-215ENST00000622697 HIST1H2BHQ93079 126 aa13.48□□□□□ -0.25
GABRB3-215ENST00000622697 METTL26Q96S19 204 aa13.48□□□□□ -0.25
GABRB3-215ENST00000622697 HIST1H2BNQ99877 126 aa13.48□□□□□ -0.25
GABRB3-215ENST00000622697 HIST1H2BMQ99879 126 aa13.48□□□□□ -0.25
GABRB3-215ENST00000622697 HEATR5AQ86XA9 2040 aa13.48□□□□□ -0.25
GABRB3-215ENST00000622697 IGHV1-18A0A0C4DH31 117 aa13.48□□□□□ -0.25
GABRB3-215ENST00000622697 SH2D7A6NKC9 451 aaPredicted RBP13.48□□□□□ -0.25
GABRB3-215ENST00000622697 CTAG1AP78358 180 aa13.48□□□□□ -0.25
GABRB3-215ENST00000622697 MBNL2Q5VZF2 373 aaKnown RBP13.48□□□□□ -0.25
GABRB3-215ENST00000622697 AP5S1Q9NUS5 200 aa13.48□□□□□ -0.25
GABRB3-215ENST00000622697 RELQ04864 619 aaPredicted RBP13.47□□□□□ -0.25
GABRB3-215ENST00000622697 GFI1BQ5VTD9 330 aa13.47□□□□□ -0.25
GABRB3-215ENST00000622697 FOXA2Q9Y261 457 aaPredicted RBP13.47□□□□□ -0.25
GABRB3-215ENST00000622697 DOCK9Q9BZ29 2069 aa13.47□□□□□ -0.25
GABRB3-215ENST00000622697 HELZP42694 1942 aaKnown RBP13.47□□□□□ -0.25
GABRB3-215ENST00000622697 PMCHL1Q16048 86 aa13.47□□□□□ -0.25
GABRB3-215ENST00000622697 REC114Q7Z4M0 266 aa13.47□□□□□ -0.25
GABRB3-215ENST00000622697 FOLR2P14207 255 aa13.47□□□□□ -0.25
GABRB3-215ENST00000622697 PSMB2P49721 201 aa13.47□□□□□ -0.25
GABRB3-215ENST00000622697 CSRP2Q16527 193 aa13.47□□□□□ -0.25
GABRB3-215ENST00000622697 LEMD1Q68G75 181 aa13.47□□□□□ -0.25
GABRB3-215ENST00000622697 TBL2Q9Y4P3 447 aaKnown RBP13.47□□□□□ -0.25
GABRB3-215ENST00000622697 LCN2P80188 198 aa13.47□□□□□ -0.25
GABRB3-215ENST00000622697 C2orf83Q53S99 150 aa13.47□□□□□ -0.25
GABRB3-215ENST00000622697 RAB37Q96AX2 223 aa13.47□□□□□ -0.25
GABRB3-215ENST00000622697 APOBEC3AP31941 199 aaPredicted RBP13.47□□□□□ -0.25
GABRB3-215ENST00000622697 GNG5P63218 68 aa13.47□□□□□ -0.25
GABRB3-215ENST00000622697 ST6GALNAC3Q8NDV1 305 aa13.47□□□□□ -0.25
GABRB3-215ENST00000622697 ZNF502Q8TBZ5 544 aa13.47□□□□□ -0.25
GABRB3-215ENST00000622697 C14orf144Q96I85 54 aa13.47□□□□□ -0.25
GABRB3-215ENST00000622697 KLK15Q9H2R5 256 aa13.47□□□□□ -0.25
GABRB3-215ENST00000622697 RNFT1Q5M7Z0 435 aa13.46□□□□□ -0.25
GABRB3-215ENST00000622697 METRNQ9UJH8 293 aa13.46□□□□□ -0.25
GABRB3-215ENST00000622697 IGKV3D-15A0A087WSY6 115 aa13.46□□□□□ -0.25
GABRB3-215ENST00000622697 LYNX1G3V0Z9 82 aa13.46□□□□□ -0.25
GABRB3-215ENST00000622697 PEX7O00628 323 aa13.46□□□□□ -0.25
GABRB3-215ENST00000622697 ZNF207O43670 478 aaKnown RBP13.46□□□□□ -0.25
GABRB3-215ENST00000622697 LYNX1P0DP58 116 aa13.46□□□□□ -0.25
GABRB3-215ENST00000622697 CD24P25063 80 aa13.46□□□□□ -0.25
GABRB3-215ENST00000622697 CYB5R2Q6BCY4 276 aa13.46□□□□□ -0.25
GABRB3-215ENST00000622697 B9A039 149 aa13.46□□□□□ -0.25
GABRB3-215ENST00000622697 NPIPB11E5RHQ5 1161 aa13.46□□□□□ -0.25
GABRB3-215ENST00000622697 IL18BPO95998 194 aa13.46□□□□□ -0.25
GABRB3-215ENST00000622697 DUTP33316 252 aaKnown RBP13.46□□□□□ -0.25
GABRB3-215ENST00000622697 TMPRSS3P57727 454 aa13.46□□□□□ -0.25
GABRB3-215ENST00000622697 HS3ST6Q96QI5 342 aa13.46□□□□□ -0.25
GABRB3-215ENST00000622697 GPX4P36969 197 aaPredicted RBP13.46□□□□□ -0.26
GABRB3-215ENST00000622697 DPRXA6NFQ7 191 aa13.46□□□□□ -0.26
GABRB3-215ENST00000622697 FOXI3A8MTJ6 420 aaPredicted RBP13.46□□□□□ -0.26
GABRB3-215ENST00000622697 ANOS1P23352 680 aa13.46□□□□□ -0.26
GABRB3-215ENST00000622697 HBBP68871 147 aa13.46□□□□□ -0.26
GABRB3-215ENST00000622697 C1QL4Q86Z23 238 aa13.46□□□□□ -0.26
GABRB3-215ENST00000622697 ST6GALNAC6Q969X2 333 aa13.46□□□□□ -0.26
GABRB3-215ENST00000622697 ELOVL5Q9NYP7 299 aa13.46□□□□□ -0.26
GABRB3-215ENST00000622697 F11RQ9Y624 299 aaKnown RBP13.46□□□□□ -0.26
GABRB3-215ENST00000622697 SPTBN1Q01082 2364 aaKnown RBP13.45□□□□□ -0.26
GABRB3-215ENST00000622697 C5orf52A6NGY3 159 aa13.45□□□□□ -0.26
GABRB3-215ENST00000622697 YPEL1O60688 119 aa13.45□□□□□ -0.26
GABRB3-215ENST00000622697 IGKV3-15P01624 115 aa13.45□□□□□ -0.26
GABRB3-215ENST00000622697 HEPN1Q6WQI6 88 aa13.45□□□□□ -0.26
GABRB3-215ENST00000622697 YPEL2Q96QA6 119 aa13.45□□□□□ -0.26
GABRB3-215ENST00000622697 C17orf100A8MU93 164 aa13.45□□□□□ -0.26
GABRB3-215ENST00000622697 TM4SF5O14894 197 aa13.45□□□□□ -0.26
GABRB3-215ENST00000622697 IGKV1D-33P01593 117 aa13.45□□□□□ -0.26
GABRB3-215ENST00000622697 IGKV1-33P01594 117 aa13.45□□□□□ -0.26
GABRB3-215ENST00000622697 TM4SF20Q53R12 229 aa13.45□□□□□ -0.26
GABRB3-215ENST00000622697 OR52E5Q8NH55 327 aa13.45□□□□□ -0.26
GABRB3-215ENST00000622697 GTF3AQ92664 365 aaKnown RBP13.45□□□□□ -0.26
GABRB3-215ENST00000622697 TRBV9A0A0B4J1U6 114 aa13.45□□□□□ -0.26
GABRB3-215ENST00000622697 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.45□□□□□ -0.26
GABRB3-215ENST00000622697 SEMA5BQ9P283 1151 aa13.45□□□□□ -0.26
GABRB3-215ENST00000622697 CDC42EP3Q9UKI2 254 aa13.45□□□□□ -0.26
GABRB3-215ENST00000622697 IGKV1-5P01602 117 aa13.45□□□□□ -0.26
GABRB3-215ENST00000622697 PYYP10082 97 aa13.45□□□□□ -0.26
GABRB3-215ENST00000622697 CD59P13987 128 aa13.45□□□□□ -0.26
GABRB3-215ENST00000622697 CX3CL1P78423 397 aa13.45□□□□□ -0.26
GABRB3-215ENST00000622697 TBR1Q16650 682 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms