RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 TUBA4BQ9H853 241 aa7.7□□□□□ -1.18
GGA3-223ENST00000621870 RPUSD1Q9UJJ7 312 aaKnown RBP7.7□□□□□ -1.18
GGA3-223ENST00000621870 MFSD2BA6NFX1 497 aa7.7□□□□□ -1.18
GGA3-223ENST00000621870 PDE6DO43924 150 aa7.7□□□□□ -1.18
GGA3-223ENST00000621870 HIST1H1BP16401 226 aaKnown RBP7.7□□□□□ -1.18
GGA3-223ENST00000621870 COL8A2P25067 703 aa7.7□□□□□ -1.18
GGA3-223ENST00000621870 MFAP2P55001 183 aa7.7□□□□□ -1.18
GGA3-223ENST00000621870 ZNF345Q14585 488 aa7.7□□□□□ -1.18
GGA3-223ENST00000621870 NCMAPQ5T1S8 102 aa7.7□□□□□ -1.18
GGA3-223ENST00000621870 MBNL2Q5VZF2 373 aaKnown RBP7.7□□□□□ -1.18
GGA3-223ENST00000621870 JMJD8Q96S16 334 aa7.7□□□□□ -1.18
GGA3-223ENST00000621870 NIT2Q9NQR4 276 aa7.7□□□□□ -1.18
GGA3-223ENST00000621870 CHD7Q9P2D1 2997 aa7.7□□□□□ -1.18
GGA3-223ENST00000621870 ZNF253O75346 499 aa7.69□□□□□ -1.18
GGA3-223ENST00000621870 AMTP48728 403 aa7.69□□□□□ -1.18
GGA3-223ENST00000621870 ZNF497Q6ZNH5 498 aa7.69□□□□□ -1.18
GGA3-223ENST00000621870 LINC00469Q8N7U9 141 aa7.69□□□□□ -1.18
GGA3-223ENST00000621870 C8orf46Q8TAG6 207 aa7.69□□□□□ -1.18
GGA3-223ENST00000621870 GALNT14Q96FL9 552 aa7.69□□□□□ -1.18
GGA3-223ENST00000621870 WNT10AQ9GZT5 417 aa7.69□□□□□ -1.18
GGA3-223ENST00000621870 NLRC5Q86WI3 1866 aa7.69□□□□□ -1.18
GGA3-223ENST00000621870 CDH23Q9H251 3354 aa7.69□□□□□ -1.18
GGA3-223ENST00000621870 IGKV1-27A0A075B6S5 117 aa7.69□□□□□ -1.18
GGA3-223ENST00000621870 RNF223E7ERA6 249 aa7.69□□□□□ -1.18
GGA3-223ENST00000621870 AMY1AP04745 511 aa7.69□□□□□ -1.18
GGA3-223ENST00000621870 DSCR9P59020 149 aa7.69□□□□□ -1.18
GGA3-223ENST00000621870 CD81P60033 236 aa7.69□□□□□ -1.18
GGA3-223ENST00000621870 HIST1H1AQ02539 215 aaPredicted RBP7.69□□□□□ -1.18
GGA3-223ENST00000621870 PLAURQ03405 335 aa7.69□□□□□ -1.18
GGA3-223ENST00000621870 CYB561D1Q8N8Q1 229 aa7.69□□□□□ -1.18
GGA3-223ENST00000621870 HSPB7Q9UBY9 170 aa7.69□□□□□ -1.18
GGA3-223ENST00000621870 IGKV1D-8A0A087WSZ0 117 aa7.69□□□□□ -1.18
GGA3-223ENST00000621870 OR5AL1P0C617 328 aa7.69□□□□□ -1.18
GGA3-223ENST00000621870 RNF224P0DH78 156 aa7.69□□□□□ -1.18
GGA3-223ENST00000621870 BCL2P10415 239 aa7.69□□□□□ -1.18
GGA3-223ENST00000621870 EFNB1P98172 346 aa7.69□□□□□ -1.18
GGA3-223ENST00000621870 MEF2BQ02080 365 aaPredicted RBP7.69□□□□□ -1.18
GGA3-223ENST00000621870 RIGQ13278 110 aa7.69□□□□□ -1.18
GGA3-223ENST00000621870 GATAD1Q8WUU5 269 aa7.69□□□□□ -1.18
GGA3-223ENST00000621870 SMIM8Q96KF7 97 aa7.69□□□□□ -1.18
GGA3-223ENST00000621870 PLSCR2Q9NRY7 297 aa7.69□□□□□ -1.18
GGA3-223ENST00000621870 CBY1Q9Y3M2 126 aa7.69□□□□□ -1.18
GGA3-223ENST00000621870 MPTX1A8MV57 137 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 PRSS1P07477 247 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 EGR1P18146 543 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 GATA2P23769 480 aaPredicted RBP7.68□□□□□ -1.18
GGA3-223ENST00000621870 UQCRFS1P47985 274 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 SNRPD3P62318 126 aaKnown RBP7.68□□□□□ -1.18
GGA3-223ENST00000621870 DLK1P80370 383 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 FAM166AQ6J272 317 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 HEPN1Q6WQI6 88 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 RAX2Q96IS3 184 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 IFI27L2Q9H2X8 130 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 C7orf77A4D0Y5 90 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 H3BQ15 152 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 H3BUX3 64 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 MLNRO43193 412 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 C10orf55Q5SWW7 151 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 OR51M1Q9H341 326 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 PRO3102Q9H379 93 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 GBF1Q92538 1859 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 J3QRE1 110 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 NMBP08949 121 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 DLX6P56179 175 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 RNF144BQ7Z419 303 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 FAM89BQ8N5H3 189 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 SGMS2Q8NHU3 365 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 GPX1P07203 203 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 FHITP49789 147 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 SULT1A2P50226 295 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 HIST3H3Q16695 136 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 GOLT1AQ6ZVE7 132 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 ITLN2Q8WWU7 325 aaPredicted RBP7.68□□□□□ -1.18
GGA3-223ENST00000621870 TMPRSS5Q9H3S3 457 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 PNRC2Q9NPJ4 139 aaKnown RBP7.68□□□□□ -1.18
GGA3-223ENST00000621870 RPRMQ9NS64 109 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 FBLN5Q9UBX5 448 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 FAM215AQ9Y5M1 114 aa7.68□□□□□ -1.18
GGA3-223ENST00000621870 A8MWL6 223 aa7.67□□□□□ -1.18
GGA3-223ENST00000621870 ARL14EPLP0DKL9 152 aa7.67□□□□□ -1.18
GGA3-223ENST00000621870 CRYBB3P26998 211 aa7.67□□□□□ -1.18
GGA3-223ENST00000621870 IER3P46695 156 aa7.67□□□□□ -1.18
GGA3-223ENST00000621870 C5orf24Q7Z6I8 188 aa7.67□□□□□ -1.18
GGA3-223ENST00000621870 NHLRC2Q8NBF2 726 aa7.67□□□□□ -1.18
GGA3-223ENST00000621870 ELOVL1Q9BW60 279 aa7.67□□□□□ -1.18
GGA3-223ENST00000621870 SH3BGRL3Q9H299 93 aa7.67□□□□□ -1.18
GGA3-223ENST00000621870 ELOA3CA0A087WX78 387 aaPredicted RBP7.67□□□□□ -1.18
GGA3-223ENST00000621870 RAMP3O60896 148 aa7.67□□□□□ -1.18
GGA3-223ENST00000621870 TNFSF13O75888 250 aa7.67□□□□□ -1.18
GGA3-223ENST00000621870 ICAM4Q14773 271 aa7.67□□□□□ -1.18
GGA3-223ENST00000621870 TMEM200BQ69YZ2 307 aa7.67□□□□□ -1.18
GGA3-223ENST00000621870 DHRS11Q6UWP2 260 aa7.67□□□□□ -1.18
GGA3-223ENST00000621870 LINC00305Q7Z4B0 112 aa7.67□□□□□ -1.18
GGA3-223ENST00000621870 CD177Q8N6Q3 437 aa7.67□□□□□ -1.18
GGA3-223ENST00000621870 SLC25A28Q96A46 364 aa7.67□□□□□ -1.18
GGA3-223ENST00000621870 ZNF524Q96C55 264 aa7.67□□□□□ -1.18
GGA3-223ENST00000621870 AQP10Q96PS8 301 aa7.67□□□□□ -1.18
GGA3-223ENST00000621870 A0A0A6YYD4 124 aa7.67□□□□□ -1.18
GGA3-223ENST00000621870 AP4M1O00189 453 aa7.67□□□□□ -1.18
GGA3-223ENST00000621870 PHOX2AO14813 284 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms