RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 LINC00482Q8N8I6 264 aa12.64□□□□□ -0.39
CD40-207ENST00000620709 OR4A16Q8NH70 328 aa12.64□□□□□ -0.39
CD40-207ENST00000620709 DPF1Q92782 380 aa12.64□□□□□ -0.39
CD40-207ENST00000620709 RAB40CQ96S21 281 aa12.64□□□□□ -0.39
CD40-207ENST00000620709 C11orf1Q9H5F2 150 aa12.64□□□□□ -0.39
CD40-207ENST00000620709 ZC4H2Q9NQZ6 224 aa12.64□□□□□ -0.39
CD40-207ENST00000620709 HSPB7Q9UBY9 170 aa12.64□□□□□ -0.39
CD40-207ENST00000620709 MSGN1A6NI15 193 aa12.63□□□□□ -0.39
CD40-207ENST00000620709 BCL2L11O43521 198 aa12.63□□□□□ -0.39
CD40-207ENST00000620709 IGHG2P01859 326 aa12.63□□□□□ -0.39
CD40-207ENST00000620709 RPL12P30050 165 aaKnown RBP12.63□□□□□ -0.39
CD40-207ENST00000620709 KRTAP10-11P60412 298 aa12.63□□□□□ -0.39
CD40-207ENST00000620709 IFITM2Q01629 132 aa12.63□□□□□ -0.39
CD40-207ENST00000620709 TNFRSF9Q07011 255 aa12.63□□□□□ -0.39
CD40-207ENST00000620709 AARDQ4LEZ3 155 aa12.63□□□□□ -0.39
CD40-207ENST00000620709 OR4A47Q6IF82 309 aa12.63□□□□□ -0.39
CD40-207ENST00000620709 STPG2Q8N412 459 aa12.63□□□□□ -0.39
CD40-207ENST00000620709 DUX3Q96PT4 197 aa12.63□□□□□ -0.39
CD40-207ENST00000620709 RASL11BQ9BPW5 248 aa12.63□□□□□ -0.39
CD40-207ENST00000620709 K7EIL1 84 aa12.62□□□□□ -0.39
CD40-207ENST00000620709 RPS16P62249 146 aaKnown RBP12.62□□□□□ -0.39
CD40-207ENST00000620709 ETV3LQ6ZN32 361 aa12.62□□□□□ -0.39
CD40-207ENST00000620709 OR2C3Q8N628 320 aa12.62□□□□□ -0.39
CD40-207ENST00000620709 VSTM2AQ8TAG5 236 aa12.62□□□□□ -0.39
CD40-207ENST00000620709 ARPC5LQ9BPX5 153 aa12.62□□□□□ -0.39
CD40-207ENST00000620709 BET1LQ9NYM9 111 aa12.62□□□□□ -0.39
CD40-207ENST00000620709 WI2-2373I1.2A0A1W2PRP0 233 aa12.62□□□□□ -0.39
CD40-207ENST00000620709 C15orf61A6NNL5 157 aa12.62□□□□□ -0.39
CD40-207ENST00000620709 AP4M1O00189 453 aa12.62□□□□□ -0.39
CD40-207ENST00000620709 MOSP00540 346 aa12.62□□□□□ -0.39
CD40-207ENST00000620709 SAA1P0DJI8 122 aaPredicted RBP12.62□□□□□ -0.39
CD40-207ENST00000620709 OR2B8PP59922 312 aa12.62□□□□□ -0.39
CD40-207ENST00000620709 UBE2KP61086 200 aa12.62□□□□□ -0.39
CD40-207ENST00000620709 EBI3Q14213 229 aa12.62□□□□□ -0.39
CD40-207ENST00000620709 LCNL1Q6ZST4 164 aa12.62□□□□□ -0.39
CD40-207ENST00000620709 ZNF429Q86V71 674 aa12.62□□□□□ -0.39
CD40-207ENST00000620709 Q8N9W7 124 aa12.62□□□□□ -0.39
CD40-207ENST00000620709 QTRT1Q9BXR0 403 aaKnown RBP12.62□□□□□ -0.39
CD40-207ENST00000620709 LYRM2Q9NU23 88 aaPredicted RBP12.62□□□□□ -0.39
CD40-207ENST00000620709 WSB1Q9Y6I7 421 aa12.62□□□□□ -0.39
CD40-207ENST00000620709 SRRM4A7MD48 611 aaKnown RBP12.61□□□□□ -0.39
CD40-207ENST00000620709 RGS13O14921 159 aa12.61□□□□□ -0.39
CD40-207ENST00000620709 IL6RP08887 468 aaPredicted RBP12.61□□□□□ -0.39
CD40-207ENST00000620709 CD1BP29016 333 aa12.61□□□□□ -0.39
CD40-207ENST00000620709 LGALS7P47929 136 aa12.61□□□□□ -0.39
CD40-207ENST00000620709 CAV2P51636 162 aa12.61□□□□□ -0.39
CD40-207ENST00000620709 TAS2R30P59541 319 aa12.61□□□□□ -0.39
CD40-207ENST00000620709 VMA21Q3ZAQ7 101 aa12.61□□□□□ -0.39
CD40-207ENST00000620709 TEX38Q6PEX7 206 aa12.61□□□□□ -0.39
CD40-207ENST00000620709 SLC51BQ86UW2 128 aa12.61□□□□□ -0.39
CD40-207ENST00000620709 PUSL1Q8N0Z8 303 aaKnown RBP12.61□□□□□ -0.39
CD40-207ENST00000620709 COMMD1Q8N668 190 aa12.61□□□□□ -0.39
CD40-207ENST00000620709 OR52E5Q8NH55 327 aa12.61□□□□□ -0.39
CD40-207ENST00000620709 OR4A5Q8NH83 315 aa12.61□□□□□ -0.39
CD40-207ENST00000620709 GPR61Q9BZJ8 451 aa12.61□□□□□ -0.39
CD40-207ENST00000620709 SLC25A31Q9H0C2 315 aa12.61□□□□□ -0.39
CD40-207ENST00000620709 RBKSQ9H477 322 aa12.61□□□□□ -0.39
CD40-207ENST00000620709 PRNDQ9UKY0 176 aa12.61□□□□□ -0.39
CD40-207ENST00000620709 FOXA2Q9Y261 457 aaPredicted RBP12.61□□□□□ -0.39
CD40-207ENST00000620709 TRAV3A0A0B4J244 114 aa12.6□□□□□ -0.39
CD40-207ENST00000620709 UPK2O00526 184 aa12.6□□□□□ -0.39
CD40-207ENST00000620709 KBTBD11O94819 623 aa12.6□□□□□ -0.39
CD40-207ENST00000620709 TMEM50AO95807 157 aa12.6□□□□□ -0.39
CD40-207ENST00000620709 IFNA17P01571 189 aa12.6□□□□□ -0.39
CD40-207ENST00000620709 RPLP1P05386 114 aaKnown RBP12.6□□□□□ -0.39
CD40-207ENST00000620709 IAPPP10997 89 aa12.6□□□□□ -0.39
CD40-207ENST00000620709 MYCNOSP40205 109 aa12.6□□□□□ -0.39
CD40-207ENST00000620709 PAX9P55771 341 aa12.6□□□□□ -0.39
CD40-207ENST00000620709 SPCS3P61009 180 aa12.6□□□□□ -0.39
CD40-207ENST00000620709 Q8N6K4 173 aa12.6□□□□□ -0.39
CD40-207ENST00000620709 SMIM8Q96KF7 97 aa12.6□□□□□ -0.39
CD40-207ENST00000620709 CIB3Q96Q77 187 aaPredicted RBP12.6□□□□□ -0.39
CD40-207ENST00000620709 FAM24AA6NFZ4 105 aa12.59□□□□□ -0.39
CD40-207ENST00000620709 CEBPZOSA8MTT3 80 aa12.59□□□□□ -0.39
CD40-207ENST00000620709 TAAR5O14804 337 aa12.59□□□□□ -0.39
CD40-207ENST00000620709 LY86O95711 162 aa12.59□□□□□ -0.39
CD40-207ENST00000620709 IGLV2-23P01705 113 aa12.59□□□□□ -0.39
CD40-207ENST00000620709 F2RL1P55085 397 aa12.59□□□□□ -0.39
CD40-207ENST00000620709 BAXQ07812 192 aa12.59□□□□□ -0.39
CD40-207ENST00000620709 DEFB136Q30KP8 78 aa12.59□□□□□ -0.39
CD40-207ENST00000620709 TMEM252Q8N6L7 170 aa12.59□□□□□ -0.39
CD40-207ENST00000620709 OR8H1Q8NGG4 311 aa12.59□□□□□ -0.39
CD40-207ENST00000620709 DTD1Q8TEA8 209 aa12.59□□□□□ -0.39
CD40-207ENST00000620709 TSNAXQ99598 290 aaKnown RBP12.59□□□□□ -0.39
CD40-207ENST00000620709 RNF5Q99942 180 aa12.59□□□□□ -0.39
CD40-207ENST00000620709 MCRIP2Q9BUT9 160 aaKnown RBP12.59□□□□□ -0.39
CD40-207ENST00000620709 TMEM14BQ9NUH8 114 aa12.59□□□□□ -0.39
CD40-207ENST00000620709 PSENENQ9NZ42 101 aa12.59□□□□□ -0.39
CD40-207ENST00000620709 IGSF23A1L1A6 192 aa12.58□□□□□ -0.4
CD40-207ENST00000620709 EWSR1Q01844 656 aaKnown RBP eCLIP12.58□□□□□ -0.4
CD40-207ENST00000620709 TMEM167AQ8TBQ9 72 aa12.58□□□□□ -0.4
CD40-207ENST00000620709 CLCC1Q96S66 551 aa12.58□□□□□ -0.4
CD40-207ENST00000620709 HSPB9Q9BQS6 159 aa12.58□□□□□ -0.4
CD40-207ENST00000620709 ZNF471Q9BX82 626 aaPredicted RBP12.58□□□□□ -0.4
CD40-207ENST00000620709 FKBP11Q9NYL4 201 aa12.58□□□□□ -0.4
CD40-207ENST00000620709 CCL24O00175 119 aa12.57□□□□□ -0.4
CD40-207ENST00000620709 FGF2P09038 288 aa12.57□□□□□ -0.4
CD40-207ENST00000620709 HSPE1P61604 102 aaKnown RBP12.57□□□□□ -0.4
CD40-207ENST00000620709 TEX261Q6UWH6 196 aa12.57□□□□□ -0.4
CD40-207ENST00000620709 ZNF767PQ75MW2 155 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms