RNA–Protein interactions for RNA: ENST00000620580.1

LINC00649-218, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 779 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-218ENST00000620580 TBC1D26Q86UD7 250 aa8.6□□□□□ -1.03
LINC00649-218ENST00000620580 SPAG16Q8N0X2 631 aa8.6□□□□□ -1.03
LINC00649-218ENST00000620580 MARCH1Q8TCQ1 289 aa8.6□□□□□ -1.03
LINC00649-218ENST00000620580 CCDC140Q96MF4 163 aa8.6□□□□□ -1.03
LINC00649-218ENST00000620580 WFDC10AQ9H1F0 79 aa8.6□□□□□ -1.03
LINC00649-218ENST00000620580 TUBA4BQ9H853 241 aa8.6□□□□□ -1.03
LINC00649-218ENST00000620580 EDA2RQ9HAV5 297 aa8.6□□□□□ -1.03
LINC00649-218ENST00000620580 PLEKHA3Q9HB20 300 aa8.6□□□□□ -1.03
LINC00649-218ENST00000620580 RETNQ9HD89 108 aa8.6□□□□□ -1.03
LINC00649-218ENST00000620580 BET1LQ9NYM9 111 aa8.6□□□□□ -1.03
LINC00649-218ENST00000620580 PEMTQ9UBM1 199 aa8.6□□□□□ -1.03
LINC00649-218ENST00000620580 ZNF257Q9Y2Q1 563 aa8.6□□□□□ -1.03
LINC00649-218ENST00000620580 C2orf70A6NJV1 201 aa8.59□□□□□ -1.03
LINC00649-218ENST00000620580 NPIPB5A8MRT5 1133 aa8.59□□□□□ -1.03
LINC00649-218ENST00000620580 ATG12O94817 140 aa8.59□□□□□ -1.03
LINC00649-218ENST00000620580 RLN1P04808 185 aa8.59□□□□□ -1.03
LINC00649-218ENST00000620580 CRYGCP07315 174 aa8.59□□□□□ -1.03
LINC00649-218ENST00000620580 CD7P09564 240 aa8.59□□□□□ -1.03
LINC00649-218ENST00000620580 FOLR2P14207 255 aa8.59□□□□□ -1.03
LINC00649-218ENST00000620580 NQO2P16083 231 aa8.59□□□□□ -1.03
LINC00649-218ENST00000620580 PSMB6P28072 239 aa8.59□□□□□ -1.03
LINC00649-218ENST00000620580 MAS1LP35410 378 aa8.59□□□□□ -1.03
LINC00649-218ENST00000620580 CD81P60033 236 aa8.59□□□□□ -1.03
LINC00649-218ENST00000620580 RPL8P62917 257 aaKnown RBP8.59□□□□□ -1.03
LINC00649-218ENST00000620580 SRPXP78539 464 aa8.59□□□□□ -1.03
LINC00649-218ENST00000620580 DHODHQ02127 395 aa8.59□□□□□ -1.03
LINC00649-218ENST00000620580 DEFB114Q30KQ6 69 aa8.59□□□□□ -1.03
LINC00649-218ENST00000620580 ZNF585BQ52M93 769 aa8.59□□□□□ -1.03
LINC00649-218ENST00000620580 TMEM128Q5BJH2 165 aa8.59□□□□□ -1.03
LINC00649-218ENST00000620580 OR4A47Q6IF82 309 aa8.59□□□□□ -1.03
LINC00649-218ENST00000620580 LCN12Q6JVE5 192 aa8.59□□□□□ -1.03
LINC00649-218ENST00000620580 CLEC19AQ6UXS0 136 aa8.59□□□□□ -1.03
LINC00649-218ENST00000620580 GTSCR1Q86UQ5 136 aa8.59□□□□□ -1.03
LINC00649-218ENST00000620580 SLC25A42Q86VD7 318 aa8.59□□□□□ -1.03
LINC00649-218ENST00000620580 CACNG8Q8WXS5 425 aa8.59□□□□□ -1.03
LINC00649-218ENST00000620580 IL22RA2Q969J5 263 aa8.59□□□□□ -1.03
LINC00649-218ENST00000620580 ZC4H2Q9NQZ6 224 aa8.59□□□□□ -1.03
LINC00649-218ENST00000620580 HYDINQ4G0P3 5121 aa8.58□□□□□ -1.04
LINC00649-218ENST00000620580 C3orf85A0A1B0GTC6 90 aa8.58□□□□□ -1.04
LINC00649-218ENST00000620580 MFSD2BA6NFX1 497 aa8.58□□□□□ -1.04
LINC00649-218ENST00000620580 GGCTO75223 188 aaKnown RBP8.58□□□□□ -1.04
LINC00649-218ENST00000620580 CDS2O95674 445 aa8.58□□□□□ -1.04
LINC00649-218ENST00000620580 CTRB1P17538 263 aa8.58□□□□□ -1.04
LINC00649-218ENST00000620580 HLA-GP17693 338 aa8.58□□□□□ -1.04
LINC00649-218ENST00000620580 DEFA1P59665 94 aa8.58□□□□□ -1.04
LINC00649-218ENST00000620580 DEFA3P59666 94 aa8.58□□□□□ -1.04
LINC00649-218ENST00000620580 PHLDA2Q53GA4 152 aa8.58□□□□□ -1.04
LINC00649-218ENST00000620580 CTRB2Q6GPI1 263 aa8.58□□□□□ -1.04
LINC00649-218ENST00000620580 MZT2BQ6NZ67 158 aa8.58□□□□□ -1.04
LINC00649-218ENST00000620580 DEFB125Q8N687 156 aa8.58□□□□□ -1.04
LINC00649-218ENST00000620580 OR51H1Q8NH63 302 aa8.58□□□□□ -1.04
LINC00649-218ENST00000620580 DYNLRB2Q8TF09 96 aa8.58□□□□□ -1.04
LINC00649-218ENST00000620580 WDR89Q96FK6 387 aaPredicted RBP8.58□□□□□ -1.04
LINC00649-218ENST00000620580 NEURL2Q9BR09 285 aa8.58□□□□□ -1.04
LINC00649-218ENST00000620580 SPATA25Q9BR10 227 aa8.58□□□□□ -1.04
LINC00649-218ENST00000620580 TMEM222Q9H0R3 208 aa8.58□□□□□ -1.04
LINC00649-218ENST00000620580 NAA60Q9H7X0 242 aa8.58□□□□□ -1.04
LINC00649-218ENST00000620580 CACFD1Q9UGQ2 172 aa8.58□□□□□ -1.04
LINC00649-218ENST00000620580 TBC1D24Q9ULP9 559 aa8.58□□□□□ -1.04
LINC00649-218ENST00000620580 KCNIP3Q9Y2W7 256 aa8.58□□□□□ -1.04
LINC00649-218ENST00000620580 IGLV11-55A0A075B6I3 123 aa8.57□□□□□ -1.04
LINC00649-218ENST00000620580 DUXBA0A1W2PPF3 345 aa8.57□□□□□ -1.04
LINC00649-218ENST00000620580 RBMY1BA6NDE4 496 aaKnown RBP8.57□□□□□ -1.04
LINC00649-218ENST00000620580 RBMY1EA6NEQ0 496 aaKnown RBP8.57□□□□□ -1.04
LINC00649-218ENST00000620580 MARCH11A6NNE9 402 aa8.57□□□□□ -1.04
LINC00649-218ENST00000620580 UPK2O00526 184 aa8.57□□□□□ -1.04
LINC00649-218ENST00000620580 S1PR2O95136 353 aa8.57□□□□□ -1.04
LINC00649-218ENST00000620580 SERPINE2P07093 398 aa8.57□□□□□ -1.04
LINC00649-218ENST00000620580 RBMY1DP0C7P1 496 aaKnown RBP8.57□□□□□ -1.04
LINC00649-218ENST00000620580 ARL3P36405 182 aa8.57□□□□□ -1.04
LINC00649-218ENST00000620580 OR2B8PP59922 312 aa8.57□□□□□ -1.04
LINC00649-218ENST00000620580 GUCA2BQ16661 112 aa8.57□□□□□ -1.04
LINC00649-218ENST00000620580 THOC7Q6I9Y2 204 aaKnown RBP8.57□□□□□ -1.04
LINC00649-218ENST00000620580 LINC00322Q6ZN03 302 aaPredicted RBP8.57□□□□□ -1.04
LINC00649-218ENST00000620580 FAM219AQ8IW50 185 aa8.57□□□□□ -1.04
LINC00649-218ENST00000620580 CENPSQ8N2Z9 138 aa8.57□□□□□ -1.04
LINC00649-218ENST00000620580 LRTM2Q8N967 370 aa8.57□□□□□ -1.04
LINC00649-218ENST00000620580 DUSP18Q8NEJ0 188 aa8.57□□□□□ -1.04
LINC00649-218ENST00000620580 OR2K2Q8NGT1 345 aa8.57□□□□□ -1.04
LINC00649-218ENST00000620580 GLYATL2Q8WU03 294 aa8.57□□□□□ -1.04
LINC00649-218ENST00000620580 TMEM230Q96A57 120 aa8.57□□□□□ -1.04
LINC00649-218ENST00000620580 TMEM56Q96MV1 263 aa8.57□□□□□ -1.04
LINC00649-218ENST00000620580 TSC22D3Q99576 134 aa8.57□□□□□ -1.04
LINC00649-218ENST00000620580 FAM110AQ9BQ89 295 aa8.57□□□□□ -1.04
LINC00649-218ENST00000620580 SRSF8Q9BRL6 282 aaKnown RBP8.57□□□□□ -1.04
LINC00649-218ENST00000620580 TMEM56-RWDD3S4R434 201 aa8.57□□□□□ -1.04
LINC00649-218ENST00000620580 EPPK1P58107 5090 aaKnown RBP8.56□□□□□ -1.04
LINC00649-218ENST00000620580 IGHV3-35A0A0C4DH35 117 aa8.56□□□□□ -1.04
LINC00649-218ENST00000620580 TEX13DA0A0J9YY54 714 aaPredicted RBP8.56□□□□□ -1.04
LINC00649-218ENST00000620580 IGLC7A0M8Q6 106 aa8.56□□□□□ -1.04
LINC00649-218ENST00000620580 ZNF320A2RRD8 509 aa8.56□□□□□ -1.04
LINC00649-218ENST00000620580 TMEM213A2RRL7 107 aa8.56□□□□□ -1.04
LINC00649-218ENST00000620580 CLEC3BP05452 202 aa8.56□□□□□ -1.04
LINC00649-218ENST00000620580 P0C879 139 aa8.56□□□□□ -1.04
LINC00649-218ENST00000620580 ANXA3P12429 323 aa8.56□□□□□ -1.04
LINC00649-218ENST00000620580 DEFA4P12838 97 aa8.56□□□□□ -1.04
LINC00649-218ENST00000620580 PI3P19957 117 aa8.56□□□□□ -1.04
LINC00649-218ENST00000620580 CBLN1P23435 193 aa8.56□□□□□ -1.04
LINC00649-218ENST00000620580 ERVK-16P61578 105 aa8.56□□□□□ -1.04
LINC00649-218ENST00000620580 SUPT4H1P63272 117 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms