RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 ZNF503-AS2A6NEH8 195 aa13.14□□□□□ -0.31
SEMA3B-214ENST00000619119 STAG3L3P0CL85 134 aa13.14□□□□□ -0.31
SEMA3B-214ENST00000619119 PRR31Q5SQ13 230 aa13.14□□□□□ -0.31
SEMA3B-214ENST00000619119 TMEM178AQ8NBL3 297 aa13.14□□□□□ -0.31
SEMA3B-214ENST00000619119 C18orf32Q8TCD1 76 aa13.14□□□□□ -0.31
SEMA3B-214ENST00000619119 NPCDR1Q9BY65 106 aa13.14□□□□□ -0.31
SEMA3B-214ENST00000619119 ST20Q9HBF5 79 aa13.14□□□□□ -0.31
SEMA3B-214ENST00000619119 IGKV1-39P01597 117 aa13.14□□□□□ -0.31
SEMA3B-214ENST00000619119 IGLV3-1P01715 115 aa13.14□□□□□ -0.31
SEMA3B-214ENST00000619119 IGKV1D-39P04432 117 aa13.14□□□□□ -0.31
SEMA3B-214ENST00000619119 OR8B8Q15620 311 aa13.14□□□□□ -0.31
SEMA3B-214ENST00000619119 TMEM211Q6ICI0 200 aa13.14□□□□□ -0.31
SEMA3B-214ENST00000619119 OR2T6Q8NHC8 308 aa13.14□□□□□ -0.31
SEMA3B-214ENST00000619119 DMXL2Q8TDJ6 3036 aa13.14□□□□□ -0.31
SEMA3B-214ENST00000619119 IGKV3D-15A0A087WSY6 115 aa13.14□□□□□ -0.31
SEMA3B-214ENST00000619119 A0A1W2PPV4 95 aa13.14□□□□□ -0.31
SEMA3B-214ENST00000619119 SH2D7A6NKC9 451 aaPredicted RBP13.14□□□□□ -0.31
SEMA3B-214ENST00000619119 IGKV1-5P01602 117 aa13.14□□□□□ -0.31
SEMA3B-214ENST00000619119 SLC25A6P12236 298 aa13.14□□□□□ -0.31
SEMA3B-214ENST00000619119 EDDM3BP56851 147 aa13.14□□□□□ -0.31
SEMA3B-214ENST00000619119 NEGR1Q7Z3B1 354 aa13.14□□□□□ -0.31
SEMA3B-214ENST00000619119 TMEM45BQ96B21 275 aa13.14□□□□□ -0.31
SEMA3B-214ENST00000619119 ATP23Q9Y6H3 246 aa13.14□□□□□ -0.31
SEMA3B-214ENST00000619119 ZNF207O43670 478 aaKnown RBP13.13□□□□□ -0.31
SEMA3B-214ENST00000619119 APCSP02743 223 aa13.13□□□□□ -0.31
SEMA3B-214ENST00000619119 SPINK2P20155 84 aa13.13□□□□□ -0.31
SEMA3B-214ENST00000619119 USF1P22415 310 aaPredicted RBP13.13□□□□□ -0.31
SEMA3B-214ENST00000619119 SCCPDHQ8NBX0 429 aa13.13□□□□□ -0.31
SEMA3B-214ENST00000619119 MCRIP2Q9BUT9 160 aaKnown RBP13.13□□□□□ -0.31
SEMA3B-214ENST00000619119 V9GYV3 84 aa13.13□□□□□ -0.31
SEMA3B-214ENST00000619119 C2orf70A6NJV1 201 aa13.13□□□□□ -0.31
SEMA3B-214ENST00000619119 H0Y8G0 127 aa13.13□□□□□ -0.31
SEMA3B-214ENST00000619119 TRAPPC2LH3BP13 241 aa13.13□□□□□ -0.31
SEMA3B-214ENST00000619119 FABP6P51161 128 aa13.13□□□□□ -0.31
SEMA3B-214ENST00000619119 PCBD1P61457 104 aa13.13□□□□□ -0.31
SEMA3B-214ENST00000619119 MEF2CQ06413 473 aaPredicted RBP13.13□□□□□ -0.31
SEMA3B-214ENST00000619119 ZNF788Q6ZQV5 615 aa13.13□□□□□ -0.31
SEMA3B-214ENST00000619119 PERPQ96FX8 193 aa13.13□□□□□ -0.31
SEMA3B-214ENST00000619119 SCGB1A1P11684 91 aa13.12□□□□□ -0.31
SEMA3B-214ENST00000619119 RPL31P62899 125 aaKnown RBP13.12□□□□□ -0.31
SEMA3B-214ENST00000619119 FOXE3Q13461 319 aa13.12□□□□□ -0.31
SEMA3B-214ENST00000619119 RNASE7Q9H1E1 156 aaKnown RBP13.12□□□□□ -0.31
SEMA3B-214ENST00000619119 PSG11Q9UQ72 335 aa13.12□□□□□ -0.31
SEMA3B-214ENST00000619119 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.12□□□□□ -0.31
SEMA3B-214ENST00000619119 C5orf49A4QMS7 147 aa13.12□□□□□ -0.31
SEMA3B-214ENST00000619119 ARL14EPLP0DKL9 152 aa13.12□□□□□ -0.31
SEMA3B-214ENST00000619119 DOLPP1Q86YN1 238 aa13.12□□□□□ -0.31
SEMA3B-214ENST00000619119 TMEM70Q9BUB7 260 aa13.12□□□□□ -0.31
SEMA3B-214ENST00000619119 COMMD5Q9GZQ3 224 aa13.12□□□□□ -0.31
SEMA3B-214ENST00000619119 CEP295Q9C0D2 2601 aa13.12□□□□□ -0.31
SEMA3B-214ENST00000619119 CACNA1DQ01668 2161 aa13.12□□□□□ -0.31
SEMA3B-214ENST00000619119 TEX48A0A1B0GUV7 120 aa13.12□□□□□ -0.31
SEMA3B-214ENST00000619119 CX3CL1P78423 397 aa13.12□□□□□ -0.31
SEMA3B-214ENST00000619119 SLAQ13239 276 aa13.12□□□□□ -0.31
SEMA3B-214ENST00000619119 PIGCQ92535 297 aa13.12□□□□□ -0.31
SEMA3B-214ENST00000619119 HES4Q9HCC6 221 aa13.12□□□□□ -0.31
SEMA3B-214ENST00000619119 K7EP34 96 aa13.11□□□□□ -0.31
SEMA3B-214ENST00000619119 CDIPTO14735 213 aa13.11□□□□□ -0.31
SEMA3B-214ENST00000619119 TMEM14EPQ6UXP3 125 aa13.11□□□□□ -0.31
SEMA3B-214ENST00000619119 APC2O95996 2303 aa13.11□□□□□ -0.31
SEMA3B-214ENST00000619119 IGKV1-6A0A0C4DH72 117 aa13.11□□□□□ -0.31
SEMA3B-214ENST00000619119 FBLL1A6NHQ2 334 aaKnown RBP13.11□□□□□ -0.31
SEMA3B-214ENST00000619119 AMY1AP04745 511 aa13.11□□□□□ -0.31
SEMA3B-214ENST00000619119 GPR183P32249 361 aa13.11□□□□□ -0.31
SEMA3B-214ENST00000619119 SRSF7Q16629 238 aaKnown RBP eCLIP13.11□□□□□ -0.31
SEMA3B-214ENST00000619119 OR2Z1Q8NG97 314 aa13.11□□□□□ -0.31
SEMA3B-214ENST00000619119 RAB37Q96AX2 223 aa13.11□□□□□ -0.31
SEMA3B-214ENST00000619119 NPFFR1Q9GZQ6 430 aa13.11□□□□□ -0.31
SEMA3B-214ENST00000619119 SERTAD4Q9NUC0 356 aa13.11□□□□□ -0.31
SEMA3B-214ENST00000619119 TECRQ9NZ01 308 aaKnown RBP13.11□□□□□ -0.31
SEMA3B-214ENST00000619119 HILPDAQ9Y5L2 63 aa13.11□□□□□ -0.31
SEMA3B-214ENST00000619119 ACACAQ13085 2346 aa13.11□□□□□ -0.31
SEMA3B-214ENST00000619119 HLA-DQA1P01909 254 aa13.1□□□□□ -0.31
SEMA3B-214ENST00000619119 HIST1H1AQ02539 215 aaPredicted RBP13.1□□□□□ -0.31
SEMA3B-214ENST00000619119 HSD52Q0P140 79 aa13.1□□□□□ -0.31
SEMA3B-214ENST00000619119 SPINK9Q5DT21 86 aa13.1□□□□□ -0.31
SEMA3B-214ENST00000619119 OR2K2Q8NGT1 345 aa13.1□□□□□ -0.31
SEMA3B-214ENST00000619119 EAF1Q96JC9 268 aaPredicted RBP13.1□□□□□ -0.31
SEMA3B-214ENST00000619119 OR2D2Q9H210 308 aa13.1□□□□□ -0.31
SEMA3B-214ENST00000619119 TSSC4Q9Y5U2 329 aaPredicted RBP13.1□□□□□ -0.31
SEMA3B-214ENST00000619119 MED12LQ86YW9 2145 aa13.1□□□□□ -0.31
SEMA3B-214ENST00000619119 ATMQ13315 3056 aa13.1□□□□□ -0.31
SEMA3B-214ENST00000619119 PRR14LQ5THK1 2151 aa13.1□□□□□ -0.31
SEMA3B-214ENST00000619119 COL8A2P25067 703 aa13.1□□□□□ -0.31
SEMA3B-214ENST00000619119 HTR1DP28221 377 aa13.1□□□□□ -0.31
SEMA3B-214ENST00000619119 RBM11P57052 281 aaKnown RBP13.1□□□□□ -0.31
SEMA3B-214ENST00000619119 LINC00173Q6ZV60 143 aa13.1□□□□□ -0.31
SEMA3B-214ENST00000619119 PIEZO2Q9H5I5 2752 aa13.1□□□□□ -0.31
SEMA3B-214ENST00000619119 ASPHD1Q5U4P2 390 aa13.1□□□□□ -0.31
SEMA3B-214ENST00000619119 DLL3Q9NYJ7 618 aa13.1□□□□□ -0.31
SEMA3B-214ENST00000619119 YTHDF2Q9Y5A9 579 aaKnown RBP13.1□□□□□ -0.31
SEMA3B-214ENST00000619119 TM4SF5O14894 197 aa13.09□□□□□ -0.31
SEMA3B-214ENST00000619119 CRYBB3P26998 211 aa13.09□□□□□ -0.31
SEMA3B-214ENST00000619119 RPL8P62917 257 aaKnown RBP13.09□□□□□ -0.31
SEMA3B-214ENST00000619119 FAM222BQ8WU58 562 aa13.09□□□□□ -0.31
SEMA3B-214ENST00000619119 FAM216AQ8WUB2 273 aa13.09□□□□□ -0.31
SEMA3B-214ENST00000619119 PMCHL2Q9BQD1 86 aa13.09□□□□□ -0.31
SEMA3B-214ENST00000619119 PTPRBP23467 1997 aa13.09□□□□□ -0.31
SEMA3B-214ENST00000619119 RHBDL1O75783 438 aa13.09□□□□□ -0.31
SEMA3B-214ENST00000619119 TUSC2O75896 110 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms