RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 PRR14LQ5THK1 2151 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 TRAV9-1A0A075B6T8 112 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 TRAV7A0A075B6U4 112 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 TRGV5A0A0B4J1U4 118 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 TRAV41A0A0B4J266 112 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 MUC21A0A0G2JKD1 596 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 A0A0J9YW62 118 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 MUC21A0A140T8X8 626 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 TRAPPC13A5PLN9 417 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 FABP5P3A8MUU1 101 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 FNDC10F2Z333 226 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 TRAPPC2LH3BP13 241 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 HMGB3O15347 200 aaKnown RBP1.04□□□□□ -2.24
TARDBP-220ENST00000618606 CREBL2O60519 120 aaPredicted RBP1.04□□□□□ -2.24
TARDBP-220ENST00000618606 OR2B3O76000 313 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 IGHV3-7P01780 117 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 C1QBP02746 253 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 C8GP07360 202 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 OR4E1P0C645 316 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 SULT1A3P0DMM9 295 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 SULT1A4P0DMN0 295 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 SMIM10L2AP0DMW4 78 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 SMIM10L2BP0DMW5 78 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 LGALS3P17931 250 aaKnown RBP1.04□□□□□ -2.24
TARDBP-220ENST00000618606 MSNP26038 577 aaKnown RBP1.04□□□□□ -2.24
TARDBP-220ENST00000618606 SRIP30626 198 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 TPI1P60174 286 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 AP1S1P61966 158 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 AKR1C1Q04828 323 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 TNFRSF9Q07011 255 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 TAF9Q16594 264 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 MOGQ16653 247 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 ARHGAP11BQ3KRB8 267 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 GOLT1AQ6ZVE7 132 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 SLC35E3Q7Z769 313 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 TMED4Q7Z7H5 227 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 LHFPL1Q86WI0 220 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 CLVS1Q8IUQ0 354 aaPredicted RBP1.04□□□□□ -2.24
TARDBP-220ENST00000618606 EXOC3-AS1Q8N2X6 119 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 OR11H6Q8NGC7 330 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 OR4X2Q8NGF9 303 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 GNPDA2Q8TDQ7 276 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 SLC7A6Q92536 515 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 TOMM6Q96B49 74 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 SELENOSQ9BQE4 189 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 TUBA4BQ9H853 241 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 XAGE1AQ9HD64 81 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 ATPIF1Q9UII2 106 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 UFC1Q9Y3C8 167 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 NCOA1Q15788 1441 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 CAMSAP1Q5T5Y3 1602 aa1.04□□□□□ -2.24
TARDBP-220ENST00000618606 SIPA1L1O43166 1804 aa1.03□□□□□ -2.24
TARDBP-220ENST00000618606 DICER1Q9UPY3 1922 aaKnown RBP1.03□□□□□ -2.24
TARDBP-220ENST00000618606 TRAV38-1A0A0B4J264 116 aa1.03□□□□□ -2.24
TARDBP-220ENST00000618606 A0A0G2JQZ4 141 aa1.03□□□□□ -2.24
TARDBP-220ENST00000618606 PGRMC1O00264 195 aaKnown RBP1.03□□□□□ -2.24
TARDBP-220ENST00000618606 OR2J2O76002 312 aa1.03□□□□□ -2.24
TARDBP-220ENST00000618606 CIAO1O76071 339 aa1.03□□□□□ -2.24
TARDBP-220ENST00000618606 IFNA1P01562 189 aa1.03□□□□□ -2.24
TARDBP-220ENST00000618606 IGKV1-16P04430 117 aa1.03□□□□□ -2.24
TARDBP-220ENST00000618606 RBP1P09455 135 aa1.03□□□□□ -2.24
TARDBP-220ENST00000618606 UCHL1P09936 223 aa1.03□□□□□ -2.24
TARDBP-220ENST00000618606 CBR1P16152 277 aa1.03□□□□□ -2.24
TARDBP-220ENST00000618606 RPS4Y1P22090 263 aaKnown RBP1.03□□□□□ -2.24
TARDBP-220ENST00000618606 ERP29P30040 261 aaKnown RBP1.03□□□□□ -2.24
TARDBP-220ENST00000618606 PEBP1P30086 187 aaKnown RBP1.03□□□□□ -2.24
TARDBP-220ENST00000618606 ATP5G3P48201 142 aa1.03□□□□□ -2.24
TARDBP-220ENST00000618606 EIF2B2P49770 351 aaKnown RBP1.03□□□□□ -2.24
TARDBP-220ENST00000618606 CDC42P60953 191 aa1.03□□□□□ -2.24
TARDBP-220ENST00000618606 HSPE1P61604 102 aaKnown RBP1.03□□□□□ -2.24
TARDBP-220ENST00000618606 RHOBP62745 196 aa1.03□□□□□ -2.24
TARDBP-220ENST00000618606 GNG3P63215 75 aa1.03□□□□□ -2.24
TARDBP-220ENST00000618606 GNG5P63218 68 aa1.03□□□□□ -2.24
TARDBP-220ENST00000618606 SUPT4H1P63272 117 aaKnown RBP1.03□□□□□ -2.24
TARDBP-220ENST00000618606 ZNF181Q2M3W8 571 aa1.03□□□□□ -2.24
TARDBP-220ENST00000618606 ZNF791Q3KP31 576 aaPredicted RBP1.03□□□□□ -2.24
TARDBP-220ENST00000618606 IBA57Q5T440 356 aaKnown RBP1.03□□□□□ -2.24
TARDBP-220ENST00000618606 RPL22L1Q6P5R6 122 aaKnown RBP1.03□□□□□ -2.24
TARDBP-220ENST00000618606 Q6Q795 121 aa1.03□□□□□ -2.24
TARDBP-220ENST00000618606 LYZL1Q6UWQ5 148 aa1.03□□□□□ -2.24
TARDBP-220ENST00000618606 Q8NDZ9 215 aa1.03□□□□□ -2.24
TARDBP-220ENST00000618606 OR13C4Q8NGS5 318 aa1.03□□□□□ -2.24
TARDBP-220ENST00000618606 OR5J2Q8NH18 312 aa1.03□□□□□ -2.24
TARDBP-220ENST00000618606 TERB2Q8NHR7 220 aa1.03□□□□□ -2.24
TARDBP-220ENST00000618606 DNAJC9Q8WXX5 260 aa1.03□□□□□ -2.24
TARDBP-220ENST00000618606 C20orf27Q9GZN8 174 aa1.03□□□□□ -2.24
TARDBP-220ENST00000618606 VCX3BQ9H321 246 aa1.03□□□□□ -2.24
TARDBP-220ENST00000618606 MRPL40Q9NQ50 206 aaKnown RBP1.03□□□□□ -2.24
TARDBP-220ENST00000618606 PSORS1C2Q9UIG4 136 aa1.03□□□□□ -2.24
TARDBP-220ENST00000618606 HHLA3Q9XRX5 114 aa1.03□□□□□ -2.24
TARDBP-220ENST00000618606 TIMM9Q9Y5J7 89 aa1.03□□□□□ -2.24
TARDBP-220ENST00000618606 EIF3AQ14152 1382 aaKnown RBP1.03□□□□□ -2.24
TARDBP-220ENST00000618606 ADGRB3O60242 1522 aa1.03□□□□□ -2.24
TARDBP-220ENST00000618606 RALGAPA2Q2PPJ7 1873 aa1.03□□□□□ -2.25
TARDBP-220ENST00000618606 TMSB15BA0A087X1C1 80 aa1.02□□□□□ -2.25
TARDBP-220ENST00000618606 TRAV4A0A0B4J268 109 aa1.02□□□□□ -2.25
TARDBP-220ENST00000618606 IGHV1-18A0A0C4DH31 117 aa1.02□□□□□ -2.25
TARDBP-220ENST00000618606 RTL1A6NKG5 1358 aa1.02□□□□□ -2.25
TARDBP-220ENST00000618606 C2orf74A8MZ97 194 aa1.02□□□□□ -2.25
TARDBP-220ENST00000618606 C1orf196B1AJZ1 125 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms