RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 TRIM63Q969Q1 353 aa12.18□□□□□ -0.46
BRCA1-228ENST00000618469 RTBDNQ9BSG5 229 aaPredicted RBP12.18□□□□□ -0.46
BRCA1-228ENST00000618469 THAP7Q9BT49 309 aaPredicted RBP12.18□□□□□ -0.46
BRCA1-228ENST00000618469 C5orf66Q9H5L9 145 aa12.18□□□□□ -0.46
BRCA1-228ENST00000618469 NAA60Q9H7X0 242 aa12.18□□□□□ -0.46
BRCA1-228ENST00000618469 SLC2A8Q9NY64 477 aa12.18□□□□□ -0.46
BRCA1-228ENST00000618469 SCP2D1Q9UJQ7 156 aa12.18□□□□□ -0.46
BRCA1-228ENST00000618469 LSM4Q9Y4Z0 139 aaKnown RBP12.18□□□□□ -0.46
BRCA1-228ENST00000618469 EPPK1P58107 5090 aaKnown RBP12.18□□□□□ -0.46
BRCA1-228ENST00000618469 TRBV7-1A0A0A6YYK4 115 aa12.17□□□□□ -0.46
BRCA1-228ENST00000618469 B3GALNT1O75752 331 aa12.17□□□□□ -0.46
BRCA1-228ENST00000618469 ATG12O94817 140 aa12.17□□□□□ -0.46
BRCA1-228ENST00000618469 OR2C1O95371 312 aa12.17□□□□□ -0.46
BRCA1-228ENST00000618469 CSN3P07498 182 aa12.17□□□□□ -0.46
BRCA1-228ENST00000618469 GPR183P32249 361 aa12.17□□□□□ -0.46
BRCA1-228ENST00000618469 MFAP2P55001 183 aa12.17□□□□□ -0.46
BRCA1-228ENST00000618469 PRCDQ00LT1 54 aa12.17□□□□□ -0.46
BRCA1-228ENST00000618469 SLC25A24Q6NUK1 477 aa12.17□□□□□ -0.46
BRCA1-228ENST00000618469 ZNF502Q8TBZ5 544 aa12.17□□□□□ -0.46
BRCA1-228ENST00000618469 ASCL2Q99929 193 aa12.17□□□□□ -0.46
BRCA1-228ENST00000618469 ZC4H2Q9NQZ6 224 aa12.17□□□□□ -0.46
BRCA1-228ENST00000618469 P0C879 139 aa12.16□□□□□ -0.46
BRCA1-228ENST00000618469 FAUP35544 74 aaKnown RBP12.16□□□□□ -0.46
BRCA1-228ENST00000618469 KLF9Q13886 244 aaPredicted RBP12.16□□□□□ -0.46
BRCA1-228ENST00000618469 SPINK9Q5DT21 86 aa12.16□□□□□ -0.46
BRCA1-228ENST00000618469 CCDC190Q86UF4 302 aa12.16□□□□□ -0.46
BRCA1-228ENST00000618469 TOMM5Q8N4H5 51 aa12.16□□□□□ -0.46
BRCA1-228ENST00000618469 TMEM222Q9H0R3 208 aa12.16□□□□□ -0.46
BRCA1-228ENST00000618469 PLEKHA3Q9HB20 300 aa12.16□□□□□ -0.46
BRCA1-228ENST00000618469 GPR132Q9UNW8 380 aa12.16□□□□□ -0.46
BRCA1-228ENST00000618469 SORL1Q92673 2214 aa12.15□□□□□ -0.46
BRCA1-228ENST00000618469 IGHV3-21A0A0B4J1V1 117 aa12.15□□□□□ -0.46
BRCA1-228ENST00000618469 A0A0G2JRQ6 117 aa12.15□□□□□ -0.46
BRCA1-228ENST00000618469 CRYM-AS1A6NIL9 109 aa12.15□□□□□ -0.46
BRCA1-228ENST00000618469 AP3S2P59780 193 aa12.15□□□□□ -0.46
BRCA1-228ENST00000618469 HSPE1P61604 102 aaKnown RBP12.15□□□□□ -0.46
BRCA1-228ENST00000618469 SPANXN2Q5MJ10 180 aa12.15□□□□□ -0.46
BRCA1-228ENST00000618469 OR2C3Q8N628 320 aa12.15□□□□□ -0.46
BRCA1-228ENST00000618469 SLC35G3Q8N808 338 aa12.15□□□□□ -0.46
BRCA1-228ENST00000618469 LHFPL5Q8TAF8 219 aa12.15□□□□□ -0.46
BRCA1-228ENST00000618469 VN1R17PQ8TDU5 208 aa12.15□□□□□ -0.46
BRCA1-228ENST00000618469 RRNAD1Q96FB5 475 aaKnown RBP12.15□□□□□ -0.46
BRCA1-228ENST00000618469 PDCD10Q9BUL8 212 aa12.15□□□□□ -0.46
BRCA1-228ENST00000618469 SMAD5-AS1Q9Y6J3 95 aa12.15□□□□□ -0.46
BRCA1-228ENST00000618469 RYR2Q92736 4967 aa12.14□□□□□ -0.47
BRCA1-228ENST00000618469 ST8SIA3O43173 380 aa12.14□□□□□ -0.47
BRCA1-228ENST00000618469 CLEC3BP05452 202 aa12.14□□□□□ -0.47
BRCA1-228ENST00000618469 EDN2P20800 178 aa12.14□□□□□ -0.47
BRCA1-228ENST00000618469 OR1L6Q8NGR2 347 aa12.14□□□□□ -0.47
BRCA1-228ENST00000618469 OR1P1Q8NH06 330 aa12.14□□□□□ -0.47
BRCA1-228ENST00000618469 DYNLRB2Q8TF09 96 aa12.14□□□□□ -0.47
BRCA1-228ENST00000618469 RBPMSQ93062 196 aaKnown RBP12.14□□□□□ -0.47
BRCA1-228ENST00000618469 TMEM230Q96A57 120 aa12.14□□□□□ -0.47
BRCA1-228ENST00000618469 SCGB3A2Q96PL1 93 aa12.14□□□□□ -0.47
BRCA1-228ENST00000618469 SIGLEC8Q9NYZ4 499 aa12.14□□□□□ -0.47
BRCA1-228ENST00000618469 DYNC2H1Q8NCM8 4307 aaKnown RBP12.14□□□□□ -0.47
BRCA1-228ENST00000618469 A0A0B4J293 547 aa12.13□□□□□ -0.47
BRCA1-228ENST00000618469 IGHV3-35A0A0C4DH35 117 aa12.13□□□□□ -0.47
BRCA1-228ENST00000618469 ZNF320A2RRD8 509 aa12.13□□□□□ -0.47
BRCA1-228ENST00000618469 OR2T8A6NH00 312 aa12.13□□□□□ -0.47
BRCA1-228ENST00000618469 C2orf70A6NJV1 201 aa12.13□□□□□ -0.47
BRCA1-228ENST00000618469 K7EIM0 57 aa12.13□□□□□ -0.47
BRCA1-228ENST00000618469 LGALS9O00182 355 aa12.13□□□□□ -0.47
BRCA1-228ENST00000618469 TGOLN2O43493 480 aa12.13□□□□□ -0.47
BRCA1-228ENST00000618469 CDS2O95674 445 aa12.13□□□□□ -0.47
BRCA1-228ENST00000618469 IFNA17P01571 189 aa12.13□□□□□ -0.47
BRCA1-228ENST00000618469 DHODHQ02127 395 aa12.13□□□□□ -0.47
BRCA1-228ENST00000618469 TMEM268Q5VZI3 342 aa12.13□□□□□ -0.47
BRCA1-228ENST00000618469 LCN12Q6JVE5 192 aa12.13□□□□□ -0.47
BRCA1-228ENST00000618469 PLET1Q6UQ28 207 aa12.13□□□□□ -0.47
BRCA1-228ENST00000618469 GPHB5Q86YW7 130 aa12.13□□□□□ -0.47
BRCA1-228ENST00000618469 SGPP2Q8IWX5 399 aa12.13□□□□□ -0.47
BRCA1-228ENST00000618469 UBAC2Q8NBM4 344 aa12.13□□□□□ -0.47
BRCA1-228ENST00000618469 ZNF114Q8NC26 417 aa12.13□□□□□ -0.47
BRCA1-228ENST00000618469 GLYATL2Q8WU03 294 aa12.13□□□□□ -0.47
BRCA1-228ENST00000618469 CACNG8Q8WXS5 425 aa12.13□□□□□ -0.47
BRCA1-228ENST00000618469 MISP3Q96FF7 219 aa12.13□□□□□ -0.47
BRCA1-228ENST00000618469 C21orf62Q9NYP8 219 aa12.13□□□□□ -0.47
BRCA1-228ENST00000618469 BIRC6Q9NR09 4857 aa12.12□□□□□ -0.47
BRCA1-228ENST00000618469 A8MWP6 167 aa12.12□□□□□ -0.47
BRCA1-228ENST00000618469 C3orf84H3BNL1 204 aa12.12□□□□□ -0.47
BRCA1-228ENST00000618469 AKR1C4P17516 323 aa12.12□□□□□ -0.47
BRCA1-228ENST00000618469 ETV6P41212 452 aa12.12□□□□□ -0.47
BRCA1-228ENST00000618469 HOXA1P49639 335 aaPredicted RBP12.12□□□□□ -0.47
BRCA1-228ENST00000618469 ERHP84090 104 aaKnown RBP12.12□□□□□ -0.47
BRCA1-228ENST00000618469 FAM106AQ4KMX7 169 aa12.12□□□□□ -0.47
BRCA1-228ENST00000618469 Q56UQ5 140 aa12.12□□□□□ -0.47
BRCA1-228ENST00000618469 ADAMTSL5Q6ZMM2 481 aa12.12□□□□□ -0.47
BRCA1-228ENST00000618469 FAM219AQ8IW50 185 aa12.12□□□□□ -0.47
BRCA1-228ENST00000618469 SCARB1Q8WTV0 552 aa12.12□□□□□ -0.47
BRCA1-228ENST00000618469 SRRQ9GZT4 340 aa12.12□□□□□ -0.47
BRCA1-228ENST00000618469 PRR13Q9NZ81 148 aa12.12□□□□□ -0.47
BRCA1-228ENST00000618469 TMEM213A2RRL7 107 aa12.11□□□□□ -0.47
BRCA1-228ENST00000618469 IZUMO1RA6ND01 250 aa12.11□□□□□ -0.47
BRCA1-228ENST00000618469 FOLR2P14207 255 aa12.11□□□□□ -0.47
BRCA1-228ENST00000618469 CASC10Q5T4H9 136 aa12.11□□□□□ -0.47
BRCA1-228ENST00000618469 ZNF57Q68EA5 555 aaPredicted RBP12.11□□□□□ -0.47
BRCA1-228ENST00000618469 UNQ9165/PRO28630Q6UXU0 137 aa12.11□□□□□ -0.47
BRCA1-228ENST00000618469 TMED4Q7Z7H5 227 aa12.11□□□□□ -0.47
BRCA1-228ENST00000618469 SELENOHQ8IZQ5 122 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms