RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 GDF15Q99988 308 aa12.85□□□□□ -0.35
COL5A1-208ENST00000618395 RPL27AP46776 148 aaKnown RBP12.85□□□□□ -0.35
COL5A1-208ENST00000618395 FBXW9Q5XUX1 488 aa12.85□□□□□ -0.35
COL5A1-208ENST00000618395 MBNL3Q9NUK0 354 aaKnown RBP12.85□□□□□ -0.35
COL5A1-208ENST00000618395 TOMM7Q9P0U1 55 aa12.85□□□□□ -0.35
COL5A1-208ENST00000618395 GVINP1Q7Z2Y8 2422 aa12.84□□□□□ -0.35
COL5A1-208ENST00000618395 TRAV24A0A0B4J272 114 aa12.84□□□□□ -0.35
COL5A1-208ENST00000618395 TRBV5-5A0A0J9YX44 114 aa12.84□□□□□ -0.35
COL5A1-208ENST00000618395 RHOGP84095 191 aa12.84□□□□□ -0.35
COL5A1-208ENST00000618395 KLHDC9Q8NEP7 349 aa12.84□□□□□ -0.35
COL5A1-208ENST00000618395 NCR2O95944 276 aa12.84□□□□□ -0.35
COL5A1-208ENST00000618395 OSTCQ9NRP0 149 aa12.84□□□□□ -0.35
COL5A1-208ENST00000618395 hDV102S1A0JD36 115 aa12.84□□□□□ -0.35
COL5A1-208ENST00000618395 PRSS47A8MTI9 375 aa12.84□□□□□ -0.35
COL5A1-208ENST00000618395 INAFM2P0DMQ5 153 aa12.84□□□□□ -0.35
COL5A1-208ENST00000618395 INO80CQ6PI98 192 aaPredicted RBP12.84□□□□□ -0.35
COL5A1-208ENST00000618395 TMEM86BQ8N661 226 aa12.84□□□□□ -0.35
COL5A1-208ENST00000618395 CCL26Q9Y258 94 aa12.84□□□□□ -0.35
COL5A1-208ENST00000618395 F8VVB4 439 aa12.84□□□□□ -0.35
COL5A1-208ENST00000618395 F8VWA3 439 aa12.84□□□□□ -0.35
COL5A1-208ENST00000618395 CCL20P78556 96 aa12.84□□□□□ -0.35
COL5A1-208ENST00000618395 CCDC144NLQ6NUI1 221 aa12.84□□□□□ -0.35
COL5A1-208ENST00000618395 FAM117AQ9C073 453 aa12.84□□□□□ -0.35
COL5A1-208ENST00000618395 J3KT08 172 aa12.84□□□□□ -0.35
COL5A1-208ENST00000618395 GNRHR2Q96P88 292 aa12.83□□□□□ -0.35
COL5A1-208ENST00000618395 FOXQ1Q9C009 403 aa12.83□□□□□ -0.35
COL5A1-208ENST00000618395 FGF22Q9HCT0 170 aa12.83□□□□□ -0.35
COL5A1-208ENST00000618395 EP300Q09472 2414 aaPredicted RBP12.83□□□□□ -0.35
COL5A1-208ENST00000618395 SORL1Q92673 2214 aa12.83□□□□□ -0.35
COL5A1-208ENST00000618395 FAM231BA6NCW3 169 aa12.83□□□□□ -0.36
COL5A1-208ENST00000618395 CEACAM4O75871 244 aa12.83□□□□□ -0.36
COL5A1-208ENST00000618395 NBEAP1P0C6P0 100 aa12.83□□□□□ -0.36
COL5A1-208ENST00000618395 FOXL1Q12952 345 aa12.83□□□□□ -0.36
COL5A1-208ENST00000618395 ATG4DQ86TL0 474 aaPredicted RBP12.83□□□□□ -0.36
COL5A1-208ENST00000618395 RNF222A6NCQ9 220 aa12.83□□□□□ -0.36
COL5A1-208ENST00000618395 FOXI3A8MTJ6 420 aaPredicted RBP12.83□□□□□ -0.36
COL5A1-208ENST00000618395 C1QAP02745 245 aa12.83□□□□□ -0.36
COL5A1-208ENST00000618395 KLF17Q5JT82 389 aaPredicted RBP12.83□□□□□ -0.36
COL5A1-208ENST00000618395 LINC01549A6NIU2 74 aa12.83□□□□□ -0.36
COL5A1-208ENST00000618395 IL11P20809 199 aa12.83□□□□□ -0.36
COL5A1-208ENST00000618395 MSGN1A6NI15 193 aa12.83□□□□□ -0.36
COL5A1-208ENST00000618395 CD27P26842 260 aa12.83□□□□□ -0.36
COL5A1-208ENST00000618395 RND2P52198 227 aa12.82□□□□□ -0.36
COL5A1-208ENST00000618395 HCP5Q6MZN7 132 aa12.82□□□□□ -0.36
COL5A1-208ENST00000618395 GATD1Q8NB37 220 aa12.82□□□□□ -0.36
COL5A1-208ENST00000618395 ZNF688P0C7X2 276 aa12.82□□□□□ -0.36
COL5A1-208ENST00000618395 PARP14Q460N5 1801 aa12.82□□□□□ -0.36
COL5A1-208ENST00000618395 PRSS12P56730 875 aa12.82□□□□□ -0.36
COL5A1-208ENST00000618395 RGPD3A6NKT7 1758 aaPredicted RBP12.82□□□□□ -0.36
COL5A1-208ENST00000618395 RGPD4Q7Z3J3 1758 aa12.82□□□□□ -0.36
COL5A1-208ENST00000618395 TRAV14DV4A0A0A6YYC5 116 aa12.82□□□□□ -0.36
COL5A1-208ENST00000618395 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.82□□□□□ -0.36
COL5A1-208ENST00000618395 LAMTOR3Q9UHA4 124 aa12.82□□□□□ -0.36
COL5A1-208ENST00000618395 ROS1P08922 2347 aa12.82□□□□□ -0.36
COL5A1-208ENST00000618395 TNCP24821 2201 aa12.82□□□□□ -0.36
COL5A1-208ENST00000618395 OR2H2O95918 312 aa12.82□□□□□ -0.36
COL5A1-208ENST00000618395 ATP5G3P48201 142 aa12.82□□□□□ -0.36
COL5A1-208ENST00000618395 SLAQ13239 276 aa12.82□□□□□ -0.36
COL5A1-208ENST00000618395 CRIM1Q9NZV1 1036 aa12.82□□□□□ -0.36
COL5A1-208ENST00000618395 GUSBP11Q6P575 273 aa12.82□□□□□ -0.36
COL5A1-208ENST00000618395 TEX38Q6PEX7 206 aa12.82□□□□□ -0.36
COL5A1-208ENST00000618395 A0A0J9YW62 118 aa12.82□□□□□ -0.36
COL5A1-208ENST00000618395 WNK1Q9H4A3 2382 aa12.81□□□□□ -0.36
COL5A1-208ENST00000618395 TRGV5A0A0B4J1U4 118 aa12.81□□□□□ -0.36
COL5A1-208ENST00000618395 FRMPD3Q5JV73 1810 aa12.81□□□□□ -0.36
COL5A1-208ENST00000618395 C20orf144Q9BQM9 153 aa12.81□□□□□ -0.36
COL5A1-208ENST00000618395 SYS1-DBNDD2H3BUS1 97 aa12.81□□□□□ -0.36
COL5A1-208ENST00000618395 LAGE3Q14657 143 aa12.81□□□□□ -0.36
COL5A1-208ENST00000618395 SELLP14151 372 aa12.81□□□□□ -0.36
COL5A1-208ENST00000618395 C3AR1Q16581 482 aa12.81□□□□□ -0.36
COL5A1-208ENST00000618395 SSC5DA1L4H1 1573 aa12.81□□□□□ -0.36
COL5A1-208ENST00000618395 SIPA1L1O43166 1804 aa12.81□□□□□ -0.36
COL5A1-208ENST00000618395 FAM90A10PA6NDY2 464 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 FAM90A18PA6NE21 464 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 FAM90A16PA6NEW6 464 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 FAM90A20PA6NIJ5 464 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 FAM90A8PA6NJQ4 464 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 FAM90A7PA6NKC0 464 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 FAM90A22PA8MWA6 464 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 FAM90A12PA8MX19 464 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 FAM90A5PA8MXJ8 464 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 FAM90A23PA8MXZ1 464 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 FAM90A15PP0C7V4 464 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 FAM90A13PP0C7W8 464 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 FAM90A14PP0C7W9 464 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 FAM90A24PP0C7X0 464 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 WFDC5Q8TCV5 224 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 PLA2G3Q9NZ20 509 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 FAM89BQ8N5H3 189 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 TRBV5-3A0A0A0MS03 114 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 TRAV8-3A0A0A6YYJ7 113 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 FGF16O43320 207 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 RAMP3O60896 148 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 REG1BP48304 166 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 MYEOVQ96EZ4 313 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 MED13Q9UHV7 2174 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 LIPT2A6NK58 231 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 TSPAN7P41732 249 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 C1orf100Q5SVJ3 147 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 PATE4P0C8F1 98 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms