RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 COX7A1P24310 79 aa10.09□□□□□ -0.79
CIITA-212ENST00000618207 USF2Q15853 346 aaPredicted RBP10.09□□□□□ -0.79
CIITA-212ENST00000618207 OR52E5Q8NH55 327 aa10.09□□□□□ -0.79
CIITA-212ENST00000618207 RITA1Q96K30 269 aa10.09□□□□□ -0.79
CIITA-212ENST00000618207 TEX50A0A1B0GTY4 177 aa10.09□□□□□ -0.79
CIITA-212ENST00000618207 CXorf65A6NEN9 183 aa10.09□□□□□ -0.79
CIITA-212ENST00000618207 H0YJW9 148 aa10.09□□□□□ -0.79
CIITA-212ENST00000618207 UPK2O00526 184 aa10.09□□□□□ -0.79
CIITA-212ENST00000618207 KBTBD11O94819 623 aa10.09□□□□□ -0.79
CIITA-212ENST00000618207 YIF1AO95070 293 aa10.09□□□□□ -0.79
CIITA-212ENST00000618207 LINC00614P0C842 121 aa10.09□□□□□ -0.79
CIITA-212ENST00000618207 VWC2Q2TAL6 325 aa10.09□□□□□ -0.79
CIITA-212ENST00000618207 SPNS3Q6ZMD2 512 aa10.09□□□□□ -0.79
CIITA-212ENST00000618207 CENPVQ7Z7K6 275 aaPredicted RBP10.09□□□□□ -0.79
CIITA-212ENST00000618207 NECAP1Q8NC96 275 aa10.09□□□□□ -0.79
CIITA-212ENST00000618207 FLYWCH2Q96CP2 140 aaKnown RBP10.09□□□□□ -0.79
CIITA-212ENST00000618207 GGTLC1Q9BX51 225 aa10.09□□□□□ -0.79
CIITA-212ENST00000618207 FOXA2Q9Y261 457 aaPredicted RBP10.09□□□□□ -0.79
CIITA-212ENST00000618207 TGIF2-C20orf24A0A0A6YYL0 155 aa10.08□□□□□ -0.8
CIITA-212ENST00000618207 FAM90A9PA6NNJ1 464 aa10.08□□□□□ -0.8
CIITA-212ENST00000618207 REG1AP05451 166 aa10.08□□□□□ -0.8
CIITA-212ENST00000618207 CXCL1P09341 107 aa10.08□□□□□ -0.8
CIITA-212ENST00000618207 MDKP21741 143 aaPredicted RBP10.08□□□□□ -0.8
CIITA-212ENST00000618207 SPATA31B1PQ5VZV4 182 aa10.08□□□□□ -0.8
CIITA-212ENST00000618207 SLC35E3Q7Z769 313 aa10.08□□□□□ -0.8
CIITA-212ENST00000618207 ABHD5Q8WTS1 349 aa10.08□□□□□ -0.8
CIITA-212ENST00000618207 COMMD5Q9GZQ3 224 aa10.08□□□□□ -0.8
CIITA-212ENST00000618207 PRDM13Q9H4Q3 707 aa10.08□□□□□ -0.8
CIITA-212ENST00000618207 LINC00574Q9H8X3 128 aa10.08□□□□□ -0.8
CIITA-212ENST00000618207 SIRT7Q9NRC8 400 aa10.08□□□□□ -0.8
CIITA-212ENST00000618207 TPSG1Q9NRR2 321 aa10.08□□□□□ -0.8
CIITA-212ENST00000618207 PRSS46E5RG02 174 aa10.08□□□□□ -0.8
CIITA-212ENST00000618207 SLC25A17O43808 307 aa10.08□□□□□ -0.8
CIITA-212ENST00000618207 ETFRF1Q6IPR1 90 aa10.08□□□□□ -0.8
CIITA-212ENST00000618207 ZNF833PQ6ZTB9 187 aa10.08□□□□□ -0.8
CIITA-212ENST00000618207 Q8WTZ3 238 aa10.08□□□□□ -0.8
CIITA-212ENST00000618207 C1orf159Q96HA4 380 aa10.08□□□□□ -0.8
CIITA-212ENST00000618207 NPVFQ9HCQ7 196 aa10.08□□□□□ -0.8
CIITA-212ENST00000618207 ATP5G3P48201 142 aa10.07□□□□□ -0.8
CIITA-212ENST00000618207 ZNF672Q499Z4 452 aaPredicted RBP10.07□□□□□ -0.8
CIITA-212ENST00000618207 ST6GALNAC3Q8NDV1 305 aa10.07□□□□□ -0.8
CIITA-212ENST00000618207 SEPSECSQ9HD40 501 aaKnown RBP10.07□□□□□ -0.8
CIITA-212ENST00000618207 PRNDQ9UKY0 176 aa10.07□□□□□ -0.8
CIITA-212ENST00000618207 TNFRSF13BO14836 293 aaPredicted RBP10.07□□□□□ -0.8
CIITA-212ENST00000618207 ARL14EPLP0DKL9 152 aa10.07□□□□□ -0.8
CIITA-212ENST00000618207 IGHV1-8P0DP01 117 aa10.07□□□□□ -0.8
CIITA-212ENST00000618207 TEPPQ6URK8 271 aa10.07□□□□□ -0.8
CIITA-212ENST00000618207 PARLQ9H300 379 aa10.07□□□□□ -0.8
CIITA-212ENST00000618207 A0A1W2PRD5 423 aa10.06□□□□□ -0.8
CIITA-212ENST00000618207 A0A1W2PRF3 423 aa10.06□□□□□ -0.8
CIITA-212ENST00000618207 A0A1W2PRM7 423 aa10.06□□□□□ -0.8
CIITA-212ENST00000618207 C11orf94C9JXX5 98 aa10.06□□□□□ -0.8
CIITA-212ENST00000618207 IL6RP08887 468 aaPredicted RBP10.06□□□□□ -0.8
CIITA-212ENST00000618207 HNF1AP20823 631 aa10.06□□□□□ -0.8
CIITA-212ENST00000618207 BMI1P35226 326 aa10.06□□□□□ -0.8
CIITA-212ENST00000618207 PKIAP61925 76 aa10.06□□□□□ -0.8
CIITA-212ENST00000618207 STPG3Q8N7X2 389 aa10.06□□□□□ -0.8
CIITA-212ENST00000618207 OR10A7Q8NGE5 316 aa10.06□□□□□ -0.8
CIITA-212ENST00000618207 FAM216AQ8WUB2 273 aa10.06□□□□□ -0.8
CIITA-212ENST00000618207 NABP2Q9BQ15 211 aa10.06□□□□□ -0.8
CIITA-212ENST00000618207 ACACBO00763 2458 aa10.06□□□□□ -0.8
CIITA-212ENST00000618207 PGPEP1LA6NFU8 196 aa10.06□□□□□ -0.8
CIITA-212ENST00000618207 ZNF25P17030 456 aaPredicted RBP10.06□□□□□ -0.8
CIITA-212ENST00000618207 CNTFRP26992 372 aa10.06□□□□□ -0.8
CIITA-212ENST00000618207 TMEM155Q4W5P6 130 aa10.06□□□□□ -0.8
CIITA-212ENST00000618207 WDR25Q64LD2 544 aaPredicted RBP10.06□□□□□ -0.8
CIITA-212ENST00000618207 UNQ6494/PRO21346Q6UXR6 183 aa10.06□□□□□ -0.8
CIITA-212ENST00000618207 C19orf35Q6ZS72 473 aa10.06□□□□□ -0.8
CIITA-212ENST00000618207 ACY3Q96HD9 319 aa10.06□□□□□ -0.8
CIITA-212ENST00000618207 DERL1Q9BUN8 251 aa10.06□□□□□ -0.8
CIITA-212ENST00000618207 SDF2L1Q9HCN8 221 aa10.06□□□□□ -0.8
CIITA-212ENST00000618207 TSTD3H0UI37 97 aa10.06□□□□□ -0.8
CIITA-212ENST00000618207 FOXH1O75593 365 aa10.06□□□□□ -0.8
CIITA-212ENST00000618207 SNRPCP09234 159 aaKnown RBP10.06□□□□□ -0.8
CIITA-212ENST00000618207 HIST1H1BP16401 226 aaKnown RBP10.06□□□□□ -0.8
CIITA-212ENST00000618207 RPL8P62917 257 aaKnown RBP10.06□□□□□ -0.8
CIITA-212ENST00000618207 PRCDQ00LT1 54 aa10.06□□□□□ -0.8
CIITA-212ENST00000618207 ELOBQ15370 118 aa10.06□□□□□ -0.8
CIITA-212ENST00000618207 SSX8Q7RTT4 187 aa10.06□□□□□ -0.8
CIITA-212ENST00000618207 C11orf42Q8N5U0 333 aa10.06□□□□□ -0.8
CIITA-212ENST00000618207 IGHV2-5P01817 119 aa10.05□□□□□ -0.8
CIITA-212ENST00000618207 EFNB3Q15768 340 aa10.05□□□□□ -0.8
CIITA-212ENST00000618207 PYY3Q5JQD4 70 aa10.05□□□□□ -0.8
CIITA-212ENST00000618207 OR5AN1Q8NGI8 311 aa10.05□□□□□ -0.8
CIITA-212ENST00000618207 OR4C13Q8NGP0 309 aa10.05□□□□□ -0.8
CIITA-212ENST00000618207 OR9G1Q8NH87 305 aa10.05□□□□□ -0.8
CIITA-212ENST00000618207 TUBA4BQ9H853 241 aa10.05□□□□□ -0.8
CIITA-212ENST00000618207 ONECUT1Q9UBC0 465 aa10.05□□□□□ -0.8
CIITA-212ENST00000618207 IGKV1OR2-108A0A075B7D4 117 aa10.05□□□□□ -0.8
CIITA-212ENST00000618207 IGHV3-21A0A0B4J1V1 117 aa10.05□□□□□ -0.8
CIITA-212ENST00000618207 DLEU1O43261 78 aa10.05□□□□□ -0.8
CIITA-212ENST00000618207 SOD3P08294 240 aa10.05□□□□□ -0.8
CIITA-212ENST00000618207 OPRK1P41145 380 aa10.05□□□□□ -0.8
CIITA-212ENST00000618207 LGALS4P56470 323 aa10.05□□□□□ -0.8
CIITA-212ENST00000618207 GAGE1Q13065 139 aa10.05□□□□□ -0.8
CIITA-212ENST00000618207 FAM78BQ5VT40 261 aa10.05□□□□□ -0.8
CIITA-212ENST00000618207 OR2T6Q8NHC8 308 aa10.05□□□□□ -0.8
CIITA-212ENST00000618207 OSR1Q8TAX0 266 aaPredicted RBP10.05□□□□□ -0.8
CIITA-212ENST00000618207 P2RX4Q99571 388 aa10.05□□□□□ -0.8
CIITA-212ENST00000618207 PPIAL4CA0A0B4J2A2 164 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms