RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 ZNF747Q9BV97 191 aa12.19□□□□□ -0.46
PCDHGC3-204ENST00000617222 MAGT1Q9H0U3 335 aa12.19□□□□□ -0.46
PCDHGC3-204ENST00000617222 MED28Q9H204 178 aa12.19□□□□□ -0.46
PCDHGC3-204ENST00000617222 HEYLQ9NQ87 328 aaPredicted RBP12.19□□□□□ -0.46
PCDHGC3-204ENST00000617222 MGAT4CQ9UBM8 478 aa12.19□□□□□ -0.46
PCDHGC3-204ENST00000617222 FAM90A26D6RGX4 464 aa12.18□□□□□ -0.46
PCDHGC3-204ENST00000617222 INS-IGF2F8WCM5 200 aa12.18□□□□□ -0.46
PCDHGC3-204ENST00000617222 SCGB1D2O95969 90 aa12.18□□□□□ -0.46
PCDHGC3-204ENST00000617222 CD83Q01151 205 aa12.18□□□□□ -0.46
PCDHGC3-204ENST00000617222 ID3Q02535 119 aa12.18□□□□□ -0.46
PCDHGC3-204ENST00000617222 C11orf87Q6NUJ2 197 aa12.18□□□□□ -0.46
PCDHGC3-204ENST00000617222 RNF152Q8N8N0 203 aa12.18□□□□□ -0.46
PCDHGC3-204ENST00000617222 TET2Q6N021 2002 aaPredicted RBP12.18□□□□□ -0.46
PCDHGC3-204ENST00000617222 COL6A5A8TX70 2615 aa12.17□□□□□ -0.46
PCDHGC3-204ENST00000617222 H3BUA1 57 aa12.17□□□□□ -0.46
PCDHGC3-204ENST00000617222 MED6O75586 246 aa12.17□□□□□ -0.46
PCDHGC3-204ENST00000617222 TRGV3P03979 118 aa12.17□□□□□ -0.46
PCDHGC3-204ENST00000617222 SNCAP37840 140 aa12.17□□□□□ -0.46
PCDHGC3-204ENST00000617222 TPPP2P59282 170 aa12.17□□□□□ -0.46
PCDHGC3-204ENST00000617222 POLR2GP62487 172 aaKnown RBP eCLIP12.17□□□□□ -0.46
PCDHGC3-204ENST00000617222 FCN2Q15485 313 aa12.17□□□□□ -0.46
PCDHGC3-204ENST00000617222 KHDC1LQ5JSQ8 128 aa12.17□□□□□ -0.46
PCDHGC3-204ENST00000617222 SLC25A24Q6NUK1 477 aa12.17□□□□□ -0.46
PCDHGC3-204ENST00000617222 DTD1Q8TEA8 209 aa12.17□□□□□ -0.46
PCDHGC3-204ENST00000617222 FANCD2OSQ96PS1 177 aa12.17□□□□□ -0.46
PCDHGC3-204ENST00000617222 P2RX4Q99571 388 aa12.17□□□□□ -0.46
PCDHGC3-204ENST00000617222 HIPK2Q9H2X6 1198 aa12.17□□□□□ -0.46
PCDHGC3-204ENST00000617222 SLA2Q9H6Q3 261 aa12.17□□□□□ -0.46
PCDHGC3-204ENST00000617222 F11RQ9Y624 299 aaKnown RBP12.17□□□□□ -0.46
PCDHGC3-204ENST00000617222 SYNGR2O43760 224 aa12.16□□□□□ -0.46
PCDHGC3-204ENST00000617222 OR2J3O76001 311 aa12.16□□□□□ -0.46
PCDHGC3-204ENST00000617222 BRI3O95415 125 aa12.16□□□□□ -0.46
PCDHGC3-204ENST00000617222 MBPP02686 304 aaPredicted RBP12.16□□□□□ -0.46
PCDHGC3-204ENST00000617222 IAPPP10997 89 aa12.16□□□□□ -0.46
PCDHGC3-204ENST00000617222 RHOGP84095 191 aa12.16□□□□□ -0.46
PCDHGC3-204ENST00000617222 DEFA5Q01523 94 aa12.16□□□□□ -0.46
PCDHGC3-204ENST00000617222 KIAA0141Q14154 515 aaPredicted RBP12.16□□□□□ -0.46
PCDHGC3-204ENST00000617222 CITED1Q99966 193 aa12.16□□□□□ -0.46
PCDHGC3-204ENST00000617222 DMRT1Q9Y5R6 373 aa12.16□□□□□ -0.46
PCDHGC3-204ENST00000617222 TRBV9A0A0B4J1U6 114 aa12.15□□□□□ -0.46
PCDHGC3-204ENST00000617222 A0A1W2PRX2 142 aa12.15□□□□□ -0.46
PCDHGC3-204ENST00000617222 WRBO00258 174 aa12.15□□□□□ -0.46
PCDHGC3-204ENST00000617222 RNASE2P10153 161 aaKnown RBP12.15□□□□□ -0.46
PCDHGC3-204ENST00000617222 HIST1H1BP16401 226 aaKnown RBP12.15□□□□□ -0.46
PCDHGC3-204ENST00000617222 CXCL3P19876 107 aa12.15□□□□□ -0.46
PCDHGC3-204ENST00000617222 SUB1P53999 127 aaKnown RBP eCLIP12.15□□□□□ -0.46
PCDHGC3-204ENST00000617222 MFAP2P55001 183 aa12.15□□□□□ -0.46
PCDHGC3-204ENST00000617222 H2BFSP57053 126 aa12.15□□□□□ -0.46
PCDHGC3-204ENST00000617222 IL15RAQ13261 267 aa12.15□□□□□ -0.46
PCDHGC3-204ENST00000617222 Q6ZNX1 250 aa12.15□□□□□ -0.46
PCDHGC3-204ENST00000617222 C18orf65Q6ZTR6 163 aa12.15□□□□□ -0.46
PCDHGC3-204ENST00000617222 ZNF491Q8N8L2 437 aa12.15□□□□□ -0.46
PCDHGC3-204ENST00000617222 ZNF114Q8NC26 417 aa12.15□□□□□ -0.46
PCDHGC3-204ENST00000617222 OR1P1Q8NH06 330 aa12.15□□□□□ -0.46
PCDHGC3-204ENST00000617222 WDR89Q96FK6 387 aaPredicted RBP12.15□□□□□ -0.46
PCDHGC3-204ENST00000617222 ZFP57Q9NU63 452 aa12.15□□□□□ -0.46
PCDHGC3-204ENST00000617222 FBXL7Q9UJT9 491 aa12.15□□□□□ -0.46
PCDHGC3-204ENST00000617222 TSSC4Q9Y5U2 329 aaPredicted RBP12.15□□□□□ -0.46
PCDHGC3-204ENST00000617222 IGLV11-55A0A075B6I3 123 aa12.14□□□□□ -0.47
PCDHGC3-204ENST00000617222 CYB5BO43169 146 aa12.14□□□□□ -0.47
PCDHGC3-204ENST00000617222 SSSCA1O60232 199 aa12.14□□□□□ -0.47
PCDHGC3-204ENST00000617222 NDUFB8O95169 186 aa12.14□□□□□ -0.47
PCDHGC3-204ENST00000617222 IFNA10P01566 189 aa12.14□□□□□ -0.47
PCDHGC3-204ENST00000617222 HTR2BP41595 481 aa12.14□□□□□ -0.47
PCDHGC3-204ENST00000617222 RRAS2P62070 204 aaPredicted RBP12.14□□□□□ -0.47
PCDHGC3-204ENST00000617222 RPL23AP62750 156 aaKnown RBP12.14□□□□□ -0.47
PCDHGC3-204ENST00000617222 CYCSP99999 105 aaKnown RBP12.14□□□□□ -0.47
PCDHGC3-204ENST00000617222 NSUN5P1Q3KNT7 163 aa12.14□□□□□ -0.47
PCDHGC3-204ENST00000617222 SHISA2Q6UWI4 295 aa12.14□□□□□ -0.47
PCDHGC3-204ENST00000617222 NECAP1Q8NC96 275 aa12.14□□□□□ -0.47
PCDHGC3-204ENST00000617222 OR11H7Q8NGC8 314 aa12.14□□□□□ -0.47
PCDHGC3-204ENST00000617222 OR1L6Q8NGR2 347 aa12.14□□□□□ -0.47
PCDHGC3-204ENST00000617222 MYOZ3Q8TDC0 251 aa12.14□□□□□ -0.47
PCDHGC3-204ENST00000617222 CIB3Q96Q77 187 aaPredicted RBP12.14□□□□□ -0.47
PCDHGC3-204ENST00000617222 LSM5Q9Y4Y9 91 aaKnown RBP12.14□□□□□ -0.47
PCDHGC3-204ENST00000617222 K7EPK0 472 aa12.13□□□□□ -0.47
PCDHGC3-204ENST00000617222 IGHV3-11P01762 117 aa12.13□□□□□ -0.47
PCDHGC3-204ENST00000617222 S100A10P60903 97 aa12.13□□□□□ -0.47
PCDHGC3-204ENST00000617222 ATP5G2Q06055 141 aa12.13□□□□□ -0.47
PCDHGC3-204ENST00000617222 RAB32Q13637 225 aa12.13□□□□□ -0.47
PCDHGC3-204ENST00000617222 KLK9Q2XQG4 91 aa12.13□□□□□ -0.47
PCDHGC3-204ENST00000617222 BSXQ3C1V8 233 aa12.13□□□□□ -0.47
PCDHGC3-204ENST00000617222 NDUFA11Q86Y39 141 aa12.13□□□□□ -0.47
PCDHGC3-204ENST00000617222 SLC24A4Q8NFF2 622 aa12.13□□□□□ -0.47
PCDHGC3-204ENST00000617222 MISP3Q96FF7 219 aa12.13□□□□□ -0.47
PCDHGC3-204ENST00000617222 USMG5Q96IX5 58 aa12.13□□□□□ -0.47
PCDHGC3-204ENST00000617222 UBE2E2Q96LR5 201 aa12.13□□□□□ -0.47
PCDHGC3-204ENST00000617222 OR5B12Q96R08 314 aa12.13□□□□□ -0.47
PCDHGC3-204ENST00000617222 NMES1Q9C002 83 aa12.13□□□□□ -0.47
PCDHGC3-204ENST00000617222 GNB4Q9HAV0 340 aa12.13□□□□□ -0.47
PCDHGC3-204ENST00000617222 THYN1Q9P016 225 aa12.13□□□□□ -0.47
PCDHGC3-204ENST00000617222 KLK9Q9UKQ9 250 aa12.13□□□□□ -0.47
PCDHGC3-204ENST00000617222 RCL1Q9Y2P8 373 aaKnown RBP12.13□□□□□ -0.47
PCDHGC3-204ENST00000617222 U3KQ87 197 aa12.13□□□□□ -0.47
PCDHGC3-204ENST00000617222 IGHV3-21A0A0B4J1V1 117 aa12.12□□□□□ -0.47
PCDHGC3-204ENST00000617222 A0A0G2JLM5 398 aa12.12□□□□□ -0.47
PCDHGC3-204ENST00000617222 FAM223BA6NKX1 122 aa12.12□□□□□ -0.47
PCDHGC3-204ENST00000617222 ADARB2-AS1A8MUL3 147 aa12.12□□□□□ -0.47
PCDHGC3-204ENST00000617222 NUDT19A8MXV4 375 aa12.12□□□□□ -0.47
PCDHGC3-204ENST00000617222 NPY1RP25929 384 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms