RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 TCTEX1D1Q8N7M0 179 aa12.75□□□□□ -0.37
SEMA3B-212ENST00000616701 STPG4Q8N801 248 aa12.75□□□□□ -0.37
SEMA3B-212ENST00000616701 ZCCHC14Q8WYQ9 949 aaKnown RBP12.75□□□□□ -0.37
SEMA3B-212ENST00000616701 MS4A5Q9H3V2 200 aa12.75□□□□□ -0.37
SEMA3B-212ENST00000616701 RPUSD1Q9UJJ7 312 aaKnown RBP12.75□□□□□ -0.37
SEMA3B-212ENST00000616701 LAMP3Q9UQV4 416 aa12.75□□□□□ -0.37
SEMA3B-212ENST00000616701 HIVEP3Q5T1R4 2406 aa12.75□□□□□ -0.37
SEMA3B-212ENST00000616701 IGHV1-69-2A0A0G2JMI3 117 aa12.75□□□□□ -0.37
SEMA3B-212ENST00000616701 XKRY2A2RUG3 117 aa12.75□□□□□ -0.37
SEMA3B-212ENST00000616701 DLL1O00548 723 aa12.75□□□□□ -0.37
SEMA3B-212ENST00000616701 OR5G3P0C626 314 aa12.75□□□□□ -0.37
SEMA3B-212ENST00000616701 ERVK-16P61578 105 aa12.75□□□□□ -0.37
SEMA3B-212ENST00000616701 MUC15Q8N387 334 aa12.75□□□□□ -0.37
SEMA3B-212ENST00000616701 DDB2Q92466 427 aa12.75□□□□□ -0.37
SEMA3B-212ENST00000616701 TBX15Q96SF7 602 aa12.75□□□□□ -0.37
SEMA3B-212ENST00000616701 NDUFB3O43676 98 aa12.74□□□□□ -0.37
SEMA3B-212ENST00000616701 OPN1MWP04001 364 aa12.74□□□□□ -0.37
SEMA3B-212ENST00000616701 OPN1MW2P0DN77 364 aa12.74□□□□□ -0.37
SEMA3B-212ENST00000616701 OPN1MW3P0DN78 364 aa12.74□□□□□ -0.37
SEMA3B-212ENST00000616701 COL8A2P25067 703 aa12.74□□□□□ -0.37
SEMA3B-212ENST00000616701 OR1P1Q8NH06 330 aa12.74□□□□□ -0.37
SEMA3B-212ENST00000616701 RNASEH2CQ8TDP1 164 aaKnown RBP12.74□□□□□ -0.37
SEMA3B-212ENST00000616701 RPRMQ9NS64 109 aa12.74□□□□□ -0.37
SEMA3B-212ENST00000616701 FKBP11Q9NYL4 201 aa12.74□□□□□ -0.37
SEMA3B-212ENST00000616701 LINC00312Q9Y6C7 94 aa12.74□□□□□ -0.37
SEMA3B-212ENST00000616701 LRRC75BQ2VPJ9 315 aa12.74□□□□□ -0.37
SEMA3B-212ENST00000616701 LCN15Q6UWW0 184 aa12.74□□□□□ -0.37
SEMA3B-212ENST00000616701 ZNF714Q96N38 554 aa12.74□□□□□ -0.37
SEMA3B-212ENST00000616701 WDR61Q9GZS3 305 aaKnown RBP12.74□□□□□ -0.37
SEMA3B-212ENST00000616701 TNCP24821 2201 aa12.74□□□□□ -0.37
SEMA3B-212ENST00000616701 COMPP49747 757 aaPredicted RBP12.73□□□□□ -0.37
SEMA3B-212ENST00000616701 UNQ5815/PRO19632Q6UWF5 114 aa12.73□□□□□ -0.37
SEMA3B-212ENST00000616701 C1orf122Q6ZSJ8 110 aa12.73□□□□□ -0.37
SEMA3B-212ENST00000616701 SSX8Q7RTT4 187 aa12.73□□□□□ -0.37
SEMA3B-212ENST00000616701 HINT2Q9BX68 163 aa12.73□□□□□ -0.37
SEMA3B-212ENST00000616701 HRNRQ86YZ3 2850 aaPredicted RBP12.73□□□□□ -0.37
SEMA3B-212ENST00000616701 B9A039 149 aa12.73□□□□□ -0.37
SEMA3B-212ENST00000616701 HMGB3O15347 200 aaKnown RBP12.73□□□□□ -0.37
SEMA3B-212ENST00000616701 IGKV1-16P04430 117 aa12.73□□□□□ -0.37
SEMA3B-212ENST00000616701 TFF3Q07654 80 aa12.73□□□□□ -0.37
SEMA3B-212ENST00000616701 OCIAD2Q56VL3 154 aa12.73□□□□□ -0.37
SEMA3B-212ENST00000616701 LRRC10Q5BKY1 277 aa12.73□□□□□ -0.37
SEMA3B-212ENST00000616701 OR4S2Q8NH73 311 aa12.73□□□□□ -0.37
SEMA3B-212ENST00000616701 CIB3Q96Q77 187 aaPredicted RBP12.73□□□□□ -0.37
SEMA3B-212ENST00000616701 HIPK2Q9H2X6 1198 aa12.73□□□□□ -0.37
SEMA3B-212ENST00000616701 RAB9BQ9NP90 201 aa12.73□□□□□ -0.37
SEMA3B-212ENST00000616701 PMS2P5A8MQ11 134 aa12.72□□□□□ -0.37
SEMA3B-212ENST00000616701 H3BQ15 152 aa12.72□□□□□ -0.37
SEMA3B-212ENST00000616701 RELBQ01201 579 aa12.72□□□□□ -0.37
SEMA3B-212ENST00000616701 DIAPH2-AS1Q14236 149 aa12.72□□□□□ -0.37
SEMA3B-212ENST00000616701 TAF15Q92804 592 aaKnown RBP eCLIP12.72□□□□□ -0.37
SEMA3B-212ENST00000616701 MALRD1Q5VYJ5 2156 aa12.72□□□□□ -0.37
SEMA3B-212ENST00000616701 CT45A6P0DMU7 189 aa12.72□□□□□ -0.37
SEMA3B-212ENST00000616701 CT45A5P0DMU8 189 aa12.72□□□□□ -0.37
SEMA3B-212ENST00000616701 CT45A7P0DMV0 189 aa12.72□□□□□ -0.37
SEMA3B-212ENST00000616701 DLK1P80370 383 aa12.72□□□□□ -0.37
SEMA3B-212ENST00000616701 SLC25A48Q6ZT89 311 aaKnown RBP12.72□□□□□ -0.37
SEMA3B-212ENST00000616701 ABHD12Q8N2K0 398 aa12.72□□□□□ -0.37
SEMA3B-212ENST00000616701 OR10P1Q8NGE3 313 aa12.72□□□□□ -0.37
SEMA3B-212ENST00000616701 ZNF596Q8TC21 504 aa12.72□□□□□ -0.37
SEMA3B-212ENST00000616701 HEYLQ9NQ87 328 aaPredicted RBP12.72□□□□□ -0.37
SEMA3B-212ENST00000616701 KIR2DL5BA0A0G2JN68 375 aa12.72□□□□□ -0.37
SEMA3B-212ENST00000616701 KIR2DL5BA0A0G2JPC4 375 aa12.72□□□□□ -0.37
SEMA3B-212ENST00000616701 DEFA4P12838 97 aa12.72□□□□□ -0.37
SEMA3B-212ENST00000616701 OR4A47Q6IF82 309 aa12.72□□□□□ -0.37
SEMA3B-212ENST00000616701 KIR2DL5AQ8N109 375 aa12.72□□□□□ -0.37
SEMA3B-212ENST00000616701 TRAV34A0A0B4J273 112 aa12.71□□□□□ -0.37
SEMA3B-212ENST00000616701 C15orf62A8K5M9 175 aa12.71□□□□□ -0.37
SEMA3B-212ENST00000616701 ZNF726P1Q15940 193 aa12.71□□□□□ -0.37
SEMA3B-212ENST00000616701 CLEC12BQ2HXU8 276 aa12.71□□□□□ -0.37
SEMA3B-212ENST00000616701 STAG3L3P0CL85 134 aa12.71□□□□□ -0.38
SEMA3B-212ENST00000616701 LOXP28300 417 aaPredicted RBP12.71□□□□□ -0.38
SEMA3B-212ENST00000616701 THBS3P49746 956 aa12.71□□□□□ -0.38
SEMA3B-212ENST00000616701 MRPL20Q9BYC9 149 aaKnown RBP12.71□□□□□ -0.38
SEMA3B-212ENST00000616701 CST9LQ9H4G1 147 aa12.71□□□□□ -0.38
SEMA3B-212ENST00000616701 PKD1L2Q7Z442 2459 aa12.71□□□□□ -0.38
SEMA3B-212ENST00000616701 AKAP6Q13023 2319 aa12.7□□□□□ -0.38
SEMA3B-212ENST00000616701 SRRM4A7MD48 611 aaKnown RBP12.7□□□□□ -0.38
SEMA3B-212ENST00000616701 RRHO14718 337 aa12.7□□□□□ -0.38
SEMA3B-212ENST00000616701 TNFRSF13BO14836 293 aaPredicted RBP12.7□□□□□ -0.38
SEMA3B-212ENST00000616701 EFNB3Q15768 340 aa12.7□□□□□ -0.38
SEMA3B-212ENST00000616701 TOMM20LQ6UXN7 152 aa12.7□□□□□ -0.38
SEMA3B-212ENST00000616701 OR4X1Q8NH49 305 aa12.7□□□□□ -0.38
SEMA3B-212ENST00000616701 MIEN1Q9BRT3 115 aa12.7□□□□□ -0.38
SEMA3B-212ENST00000616701 SLC35D1Q9NTN3 355 aa12.7□□□□□ -0.38
SEMA3B-212ENST00000616701 NAGKQ9UJ70 344 aa12.7□□□□□ -0.38
SEMA3B-212ENST00000616701 RBFOX3A6NFN3 312 aa12.7□□□□□ -0.38
SEMA3B-212ENST00000616701 RBFOX2O43251 390 aaKnown RBP eCLIP12.7□□□□□ -0.387e-12■■□□□ 14.1
SEMA3B-212ENST00000616701 NBEAP1P0C6P0 100 aa12.7□□□□□ -0.38
SEMA3B-212ENST00000616701 FBXL19-AS1Q494R0 122 aa12.7□□□□□ -0.38
SEMA3B-212ENST00000616701 ZNF672Q499Z4 452 aaPredicted RBP12.7□□□□□ -0.38
SEMA3B-212ENST00000616701 TPTE2P1Q5T6R2 138 aa12.7□□□□□ -0.38
SEMA3B-212ENST00000616701 PINX1Q96BK5 328 aaKnown RBP12.7□□□□□ -0.38
SEMA3B-212ENST00000616701 TCF19Q9Y242 345 aa12.7□□□□□ -0.38
SEMA3B-212ENST00000616701 IGKV1D-33P01593 117 aa12.69□□□□□ -0.38
SEMA3B-212ENST00000616701 IGKV1-33P01594 117 aa12.69□□□□□ -0.38
SEMA3B-212ENST00000616701 VAMP3Q15836 100 aa12.69□□□□□ -0.38
SEMA3B-212ENST00000616701 FBLN7Q53RD9 439 aa12.69□□□□□ -0.38
SEMA3B-212ENST00000616701 ACSM6Q6P461 480 aa12.69□□□□□ -0.38
SEMA3B-212ENST00000616701 TMEM147Q9BVK8 224 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms