RNA–Protein interactions for RNA: ENST00000616527.4

MALAT1-208, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-208ENST00000616527 ACOT6Q3I5F7 207 aaPredicted RBP6.34□□□□□ -1.39
MALAT1-208ENST00000616527 RBMS3Q6XE24 437 aaKnown RBP6.34□□□□□ -1.39
MALAT1-208ENST00000616527 VKORC1L1Q8N0U8 176 aa6.34□□□□□ -1.39
MALAT1-208ENST00000616527 Q8N7P7 452 aa6.34□□□□□ -1.39
MALAT1-208ENST00000616527 CLDND2Q8NHS1 167 aa6.34□□□□□ -1.39
MALAT1-208ENST00000616527 SUN5Q8TC36 379 aa6.34□□□□□ -1.39
MALAT1-208ENST00000616527 SFT2D1Q8WV19 159 aa6.34□□□□□ -1.39
MALAT1-208ENST00000616527 TMEM170AQ8WVE7 144 aa6.34□□□□□ -1.39
MALAT1-208ENST00000616527 SSBP3Q9BWW4 388 aaPredicted RBP6.34□□□□□ -1.39
MALAT1-208ENST00000616527 ACTR3CQ9C0K3 210 aaPredicted RBP6.34□□□□□ -1.39
MALAT1-208ENST00000616527 MS4A7Q9GZW8 240 aaPredicted RBP6.34□□□□□ -1.39
MALAT1-208ENST00000616527 FAM96BQ9Y3D0 163 aa6.34□□□□□ -1.39
MALAT1-208ENST00000616527 ACACBO00763 2458 aa6.33□□□□□ -1.4
MALAT1-208ENST00000616527 LOC105371242A0A075B767 164 aa6.33□□□□□ -1.4
MALAT1-208ENST00000616527 A0A1W2PPR1 153 aa6.33□□□□□ -1.4
MALAT1-208ENST00000616527 RRHO14718 337 aa6.33□□□□□ -1.4
MALAT1-208ENST00000616527 AGPAT2O15120 278 aa6.33□□□□□ -1.4
MALAT1-208ENST00000616527 CYB5BO43169 146 aa6.33□□□□□ -1.4
MALAT1-208ENST00000616527 IFNA1P01562 189 aa6.33□□□□□ -1.4
MALAT1-208ENST00000616527 CEACAM3P40198 252 aa6.33□□□□□ -1.4
MALAT1-208ENST00000616527 GPR6P46095 362 aaPredicted RBP6.33□□□□□ -1.4
MALAT1-208ENST00000616527 RPL29P47914 159 aaKnown RBP6.33□□□□□ -1.4
MALAT1-208ENST00000616527 UQCRFS1P47985 274 aa6.33□□□□□ -1.4
MALAT1-208ENST00000616527 KRTAP10-2P60368 255 aa6.33□□□□□ -1.4
MALAT1-208ENST00000616527 RPS16P62249 146 aaKnown RBP6.33□□□□□ -1.4
MALAT1-208ENST00000616527 ERHP84090 104 aaKnown RBP6.33□□□□□ -1.4
MALAT1-208ENST00000616527 CD69Q07108 199 aa6.33□□□□□ -1.4
MALAT1-208ENST00000616527 RAB31Q13636 194 aa6.33□□□□□ -1.4
MALAT1-208ENST00000616527 ZNF726P1Q15940 193 aa6.33□□□□□ -1.4
MALAT1-208ENST00000616527 MINOS1Q5TGZ0 78 aa6.33□□□□□ -1.4
MALAT1-208ENST00000616527 TMEM144Q7Z5S9 345 aa6.33□□□□□ -1.4
MALAT1-208ENST00000616527 MMD2Q8IY49 270 aa6.33□□□□□ -1.4
MALAT1-208ENST00000616527 PNKDQ8N490 385 aa6.33□□□□□ -1.4
MALAT1-208ENST00000616527 RPP25LQ8N5L8 163 aaKnown RBP6.33□□□□□ -1.4
MALAT1-208ENST00000616527 ZNF114Q8NC26 417 aa6.33□□□□□ -1.4
MALAT1-208ENST00000616527 OR4P4Q8NGL7 312 aa6.33□□□□□ -1.4
MALAT1-208ENST00000616527 RNASEH2CQ8TDP1 164 aaKnown RBP6.33□□□□□ -1.4
MALAT1-208ENST00000616527 TXNDC17Q9BRA2 123 aa6.33□□□□□ -1.4
MALAT1-208ENST00000616527 C19orf24Q9BVV8 132 aa6.33□□□□□ -1.4
MALAT1-208ENST00000616527 COMMD5Q9GZQ3 224 aa6.33□□□□□ -1.4
MALAT1-208ENST00000616527 EIF5A2Q9GZV4 153 aaKnown RBP6.33□□□□□ -1.4
MALAT1-208ENST00000616527 TUBA4BQ9H853 241 aa6.33□□□□□ -1.4
MALAT1-208ENST00000616527 SLC39A9Q9NUM3 307 aa6.33□□□□□ -1.4
MALAT1-208ENST00000616527 DPM3Q9P2X0 92 aa6.33□□□□□ -1.4
MALAT1-208ENST00000616527 MINOS1-NBL1R4GNA1 71 aa6.33□□□□□ -1.4
MALAT1-208ENST00000616527 RAI1Q7Z5J4 1906 aaPredicted RBP6.33□□□□□ -1.4
MALAT1-208ENST00000616527 IGHV1-3A0A0C4DH29 117 aa6.32□□□□□ -1.4
MALAT1-208ENST00000616527 LOC102723971A0A1B0GUV8 181 aa6.32□□□□□ -1.4
MALAT1-208ENST00000616527 MAP1LC3B2A6NCE7 125 aa6.32□□□□□ -1.4
MALAT1-208ENST00000616527 ODF3BA8MYP8 253 aa6.32□□□□□ -1.4
MALAT1-208ENST00000616527 DNASE2O00115 360 aaPredicted RBP6.32□□□□□ -1.4
MALAT1-208ENST00000616527 ENSAO43768 121 aaKnown RBP6.32□□□□□ -1.4
MALAT1-208ENST00000616527 SCO1O75880 301 aa6.32□□□□□ -1.4
MALAT1-208ENST00000616527 CA2P00918 260 aa6.32□□□□□ -1.4
MALAT1-208ENST00000616527 IGHV2-5P01817 119 aa6.32□□□□□ -1.4
MALAT1-208ENST00000616527 IFNA4P05014 189 aa6.32□□□□□ -1.4
MALAT1-208ENST00000616527 SRP19P09132 144 aaKnown RBP6.32□□□□□ -1.4
MALAT1-208ENST00000616527 RNASE2P10153 161 aaKnown RBP6.32□□□□□ -1.4
MALAT1-208ENST00000616527 BCL2P10415 239 aa6.32□□□□□ -1.4
MALAT1-208ENST00000616527 PSMB3P49720 205 aa6.32□□□□□ -1.4
MALAT1-208ENST00000616527 SUB1P53999 127 aaKnown RBP eCLIP6.32□□□□□ -1.4
MALAT1-208ENST00000616527 CCL20P78556 96 aa6.32□□□□□ -1.4
MALAT1-208ENST00000616527 AKR1C1Q04828 323 aa6.32□□□□□ -1.4
MALAT1-208ENST00000616527 BTN1A1Q13410 526 aa6.32□□□□□ -1.4
MALAT1-208ENST00000616527 ICAM4Q14773 271 aa6.32□□□□□ -1.4
MALAT1-208ENST00000616527 SSX2Q16385 188 aa6.32□□□□□ -1.4
MALAT1-208ENST00000616527 GUCA2BQ16661 112 aa6.32□□□□□ -1.4
MALAT1-208ENST00000616527 SOHLH1Q5JUK2 328 aa6.32□□□□□ -1.4
MALAT1-208ENST00000616527 FFAR4Q5NUL3 377 aa6.32□□□□□ -1.4
MALAT1-208ENST00000616527 AVPI1Q5T686 147 aa6.32□□□□□ -1.4
MALAT1-208ENST00000616527 TPTE2P1Q5T6R2 138 aa6.32□□□□□ -1.4
MALAT1-208ENST00000616527 ACSM6Q6P461 480 aa6.32□□□□□ -1.4
MALAT1-208ENST00000616527 ATRAIDQ6UW56 229 aa6.32□□□□□ -1.4
MALAT1-208ENST00000616527 MAP1LC3BQ9GZQ8 125 aa6.32□□□□□ -1.4
MALAT1-208ENST00000616527 TMEM231Q9H6L2 316 aa6.32□□□□□ -1.4
MALAT1-208ENST00000616527 MANBALQ9NQG1 85 aa6.32□□□□□ -1.4
MALAT1-208ENST00000616527 ZNRD1Q9P1U0 126 aa6.32□□□□□ -1.4
MALAT1-208ENST00000616527 VAX2Q9UIW0 290 aa6.32□□□□□ -1.4
MALAT1-208ENST00000616527 INSIG2Q9Y5U4 225 aa6.32□□□□□ -1.4
MALAT1-208ENST00000616527 RFNGQ9Y644 331 aa6.32□□□□□ -1.4
MALAT1-208ENST00000616527 A0A1W2PPI3 338 aa6.31□□□□□ -1.4
MALAT1-208ENST00000616527 SMCO3A2RU48 225 aa6.31□□□□□ -1.4
MALAT1-208ENST00000616527 C9orf118A6NHY6 69 aa6.31□□□□□ -1.4
MALAT1-208ENST00000616527 TMEM250H0YL14 139 aa6.31□□□□□ -1.4
MALAT1-208ENST00000616527 C19orf84I3L1E1 186 aa6.31□□□□□ -1.4
MALAT1-208ENST00000616527 IGKV1D-33P01593 117 aa6.31□□□□□ -1.4
MALAT1-208ENST00000616527 IGKV1-33P01594 117 aa6.31□□□□□ -1.4
MALAT1-208ENST00000616527 HTR1DP28221 377 aa6.31□□□□□ -1.4
MALAT1-208ENST00000616527 RHEBQ15382 184 aa6.31□□□□□ -1.4
MALAT1-208ENST00000616527 PRSS8Q16651 343 aa6.31□□□□□ -1.4
MALAT1-208ENST00000616527 MRGPRG-AS1Q2M3A8 158 aa6.31□□□□□ -1.4
MALAT1-208ENST00000616527 SPINK9Q5DT21 86 aa6.31□□□□□ -1.4
MALAT1-208ENST00000616527 CCDC144NLQ6NUI1 221 aa6.31□□□□□ -1.4
MALAT1-208ENST00000616527 SLC35E3Q7Z769 313 aa6.31□□□□□ -1.4
MALAT1-208ENST00000616527 NPBQ8NG41 125 aa6.31□□□□□ -1.4
MALAT1-208ENST00000616527 OR10G9Q8NGN4 311 aa6.31□□□□□ -1.4
MALAT1-208ENST00000616527 OR10G7Q8NGN6 311 aa6.31□□□□□ -1.4
MALAT1-208ENST00000616527 RPEQ96AT9 228 aa6.31□□□□□ -1.4
MALAT1-208ENST00000616527 SLC35E1Q96K37 410 aa6.31□□□□□ -1.4
MALAT1-208ENST00000616527 GGTLC1Q9BX51 225 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms